RNA–Protein interactions for RNA: ENST00000552818.1

PFKM-229, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-229ENST00000552818 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
PFKM-229ENST00000552818 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
PFKM-229ENST00000552818 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
PFKM-229ENST00000552818 SLIT3O75094 1523 aa12.84□□□□□ -0.35
PFKM-229ENST00000552818 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
PFKM-229ENST00000552818 ORAI2Q96SN7 254 aa12.84□□□□□ -0.35
PFKM-229ENST00000552818 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
PFKM-229ENST00000552818 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
PFKM-229ENST00000552818 ABCA3Q99758 1704 aa12.83□□□□□ -0.36
PFKM-229ENST00000552818 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
PFKM-229ENST00000552818 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
PFKM-229ENST00000552818 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.36
PFKM-229ENST00000552818 PXDNQ92626 1479 aa12.83□□□□□ -0.36
PFKM-229ENST00000552818 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
PFKM-229ENST00000552818 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
PFKM-229ENST00000552818 NGDNQ8NEJ9 315 aaKnown RBP12.82□□□□□ -0.36
PFKM-229ENST00000552818 TULP1O00294 542 aaPredicted RBP12.81□□□□□ -0.36
PFKM-229ENST00000552818 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
PFKM-229ENST00000552818 DSG3P32926 999 aa12.8□□□□□ -0.36
PFKM-229ENST00000552818 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
PFKM-229ENST00000552818 COG3Q96JB2 828 aa12.8□□□□□ -0.36
PFKM-229ENST00000552818 MSH6P52701 1360 aa12.8□□□□□ -0.36
PFKM-229ENST00000552818 COL18A1P39060 1754 aa12.79□□□□□ -0.36
PFKM-229ENST00000552818 NKX1-1Q15270 411 aaPredicted RBP12.79□□□□□ -0.36
PFKM-229ENST00000552818 ESCO1Q5FWF5 840 aa12.79□□□□□ -0.36
PFKM-229ENST00000552818 ZNF521Q96K83 1311 aa12.79□□□□□ -0.36
PFKM-229ENST00000552818 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
PFKM-229ENST00000552818 CAMTA1Q9Y6Y1 1673 aa12.77□□□□□ -0.36
PFKM-229ENST00000552818 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
PFKM-229ENST00000552818 CCDC146Q8IYE0 955 aa12.77□□□□□ -0.37
PFKM-229ENST00000552818 FOXO3O43524 673 aa12.76□□□□□ -0.37
PFKM-229ENST00000552818 GTF3C3Q9Y5Q9 886 aa12.76□□□□□ -0.37
PFKM-229ENST00000552818 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
PFKM-229ENST00000552818 USP19O94966 1318 aa12.75□□□□□ -0.37
PFKM-229ENST00000552818 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
PFKM-229ENST00000552818 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
PFKM-229ENST00000552818 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
PFKM-229ENST00000552818 DDX17Q92841 729 aaKnown RBP12.75□□□□□ -0.37
PFKM-229ENST00000552818 CFAP53Q96M91 514 aa12.75□□□□□ -0.37
PFKM-229ENST00000552818 ROBO1Q9Y6N7 1651 aa12.75□□□□□ -0.37
PFKM-229ENST00000552818 ATF3P18847 181 aa12.74□□□□□ -0.37
PFKM-229ENST00000552818 IL13P35225 146 aa12.74□□□□□ -0.37
PFKM-229ENST00000552818 GSE1Q14687 1217 aa12.74□□□□□ -0.37
PFKM-229ENST00000552818 PLEKHF1Q96S99 279 aa12.74□□□□□ -0.37
PFKM-229ENST00000552818 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
PFKM-229ENST00000552818 LMO7Q8WWI1 1683 aa12.73□□□□□ -0.37
PFKM-229ENST00000552818 SBNO1A3KN83 1393 aa12.73□□□□□ -0.37
PFKM-229ENST00000552818 NLRP6P59044 892 aa12.73□□□□□ -0.37
PFKM-229ENST00000552818 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
PFKM-229ENST00000552818 BRINP3Q76B58 766 aa12.73□□□□□ -0.37
PFKM-229ENST00000552818 TNS3Q68CZ2 1445 aa12.72□□□□□ -0.37
PFKM-229ENST00000552818 APAF1O14727 1248 aa12.72□□□□□ -0.37
PFKM-229ENST00000552818 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
PFKM-229ENST00000552818 FLT4P35916 1363 aa12.71□□□□□ -0.37
PFKM-229ENST00000552818 AHDC1Q5TGY3 1603 aaPredicted RBP12.71□□□□□ -0.37
PFKM-229ENST00000552818 PSME1Q06323 249 aa12.71□□□□□ -0.37
PFKM-229ENST00000552818 EIF4A2Q14240 407 aaKnown RBP12.71□□□□□ -0.37
PFKM-229ENST00000552818 KRT28Q7Z3Y7 464 aa12.71□□□□□ -0.37
PFKM-229ENST00000552818 ABTB2Q8N961 1025 aa12.71□□□□□ -0.37
PFKM-229ENST00000552818 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
PFKM-229ENST00000552818 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
PFKM-229ENST00000552818 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
PFKM-229ENST00000552818 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
PFKM-229ENST00000552818 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
PFKM-229ENST00000552818 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
PFKM-229ENST00000552818 HSP90AB2PQ58FF8 381 aa12.7□□□□□ -0.38
PFKM-229ENST00000552818 RUNDC1Q96C34 613 aa12.7□□□□□ -0.38
PFKM-229ENST00000552818 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
PFKM-229ENST00000552818 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
PFKM-229ENST00000552818 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
PFKM-229ENST00000552818 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
PFKM-229ENST00000552818 PPM1GO15355 546 aaPredicted RBP12.69□□□□□ -0.38
PFKM-229ENST00000552818 SOX12O15370 315 aa12.69□□□□□ -0.38
PFKM-229ENST00000552818 ABCC6O95255 1503 aa12.68□□□□□ -0.38
PFKM-229ENST00000552818 SOS2Q07890 1332 aaPredicted RBP12.68□□□□□ -0.38
PFKM-229ENST00000552818 NPHP3Q7Z494 1330 aa12.68□□□□□ -0.38
PFKM-229ENST00000552818 U2SURPO15042 1029 aaKnown RBP12.68□□□□□ -0.38
PFKM-229ENST00000552818 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
PFKM-229ENST00000552818 SLAIN2Q9P270 581 aa12.68□□□□□ -0.38
PFKM-229ENST00000552818 NUDCQ9Y266 331 aa12.68□□□□□ -0.38
PFKM-229ENST00000552818 COL22A1Q8NFW1 1626 aaPredicted RBP12.68□□□□□ -0.38
PFKM-229ENST00000552818 NCAPD2Q15021 1401 aa12.68□□□□□ -0.38
PFKM-229ENST00000552818 KDRP35968 1356 aa12.68□□□□□ -0.38
PFKM-229ENST00000552818 SPATA31A3Q5VYP0 1347 aa12.67□□□□□ -0.38
PFKM-229ENST00000552818 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
PFKM-229ENST00000552818 COL16A1Q07092 1604 aaPredicted RBP12.67□□□□□ -0.38
PFKM-229ENST00000552818 HOXC9P31274 260 aa12.67□□□□□ -0.38
PFKM-229ENST00000552818 NUBP1P53384 320 aa12.67□□□□□ -0.38
PFKM-229ENST00000552818 ARHGEF10O15013 1369 aa12.67□□□□□ -0.38
PFKM-229ENST00000552818 PDE3BQ13370 1112 aa12.66□□□□□ -0.38
PFKM-229ENST00000552818 AEBP1Q8IUX7 1158 aa12.66□□□□□ -0.38
PFKM-229ENST00000552818 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
PFKM-229ENST00000552818 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
PFKM-229ENST00000552818 PHLPP1O60346 1717 aa12.65□□□□□ -0.38
PFKM-229ENST00000552818 IGSF1Q8N6C5 1336 aa12.65□□□□□ -0.38
PFKM-229ENST00000552818 FCHSD2O94868 740 aa12.65□□□□□ -0.38
PFKM-229ENST00000552818 HMOX1P09601 288 aa12.65□□□□□ -0.38
PFKM-229ENST00000552818 ARHGEF25Q86VW2 580 aa12.65□□□□□ -0.38
PFKM-229ENST00000552818 PHACTR3Q96KR7 559 aa12.65□□□□□ -0.38
PFKM-229ENST00000552818 RNF123Q5XPI4 1314 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms