RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 MYT1Q01538 1121 aa6.42□□□□□ -1.38
NPAS3-212ENST00000552696 NR5A1Q13285 461 aa6.42□□□□□ -1.38
NPAS3-212ENST00000552696 WASHC4Q2M389 1173 aa6.42□□□□□ -1.38
NPAS3-212ENST00000552696 INTS6LQ5JSJ4 861 aaKnown RBP6.42□□□□□ -1.38
NPAS3-212ENST00000552696 PROSER2Q86WR7 435 aaPredicted RBP6.42□□□□□ -1.38
NPAS3-212ENST00000552696 WWC1Q8IX03 1113 aa6.42□□□□□ -1.38
NPAS3-212ENST00000552696 LCE2BO14633 110 aa6.41□□□□□ -1.38
NPAS3-212ENST00000552696 ST8SIA5O15466 376 aa6.41□□□□□ -1.38
NPAS3-212ENST00000552696 RAB15P59190 212 aa6.41□□□□□ -1.38
NPAS3-212ENST00000552696 POM121CA8CG34 1229 aa6.4□□□□□ -1.38
NPAS3-212ENST00000552696 ESPNB1AK53 854 aa6.4□□□□□ -1.38
NPAS3-212ENST00000552696 WDR4P57081 412 aaKnown RBP6.4□□□□□ -1.38
NPAS3-212ENST00000552696 EIF4G2P78344 907 aaKnown RBP eCLIP6.4□□□□□ -1.38
NPAS3-212ENST00000552696 CCDC116Q8IYX3 515 aa6.4□□□□□ -1.38
NPAS3-212ENST00000552696 ZNF592Q92610 1267 aa6.4□□□□□ -1.38
NPAS3-212ENST00000552696 A6NJR5 290 aa6.39□□□□□ -1.39
NPAS3-212ENST00000552696 GIGYF1O75420 1035 aaPredicted RBP6.39□□□□□ -1.39
NPAS3-212ENST00000552696 TIMP2P16035 220 aa6.39□□□□□ -1.39
NPAS3-212ENST00000552696 FNBP4Q8N3X1 1017 aaPredicted RBP6.39□□□□□ -1.39
NPAS3-212ENST00000552696 AAASQ9NRG9 546 aa6.39□□□□□ -1.39
NPAS3-212ENST00000552696 AXIN1O15169 862 aa6.38□□□□□ -1.39
NPAS3-212ENST00000552696 ZIC2O95409 532 aaPredicted RBP6.38□□□□□ -1.39
NPAS3-212ENST00000552696 MCCD1P59942 119 aaPredicted RBP6.38□□□□□ -1.39
NPAS3-212ENST00000552696 CTC1Q2NKJ3 1217 aa6.38□□□□□ -1.39
NPAS3-212ENST00000552696 PPP1R26Q5T8A7 1209 aaPredicted RBP6.38□□□□□ -1.39
NPAS3-212ENST00000552696 TRAF7Q6Q0C0 670 aa6.38□□□□□ -1.39
NPAS3-212ENST00000552696 CRIPAKQ8N1N5 446 aa6.38□□□□□ -1.39
NPAS3-212ENST00000552696 ITPKCQ96DU7 683 aa6.38□□□□□ -1.39
NPAS3-212ENST00000552696 KLF16Q9BXK1 252 aaPredicted RBP6.38□□□□□ -1.39
NPAS3-212ENST00000552696 ZFAND3Q9H8U3 227 aa6.38□□□□□ -1.39
NPAS3-212ENST00000552696 ERVH48-1M5A8F1 160 aa6.37□□□□□ -1.39
NPAS3-212ENST00000552696 CAPN5O15484 640 aaPredicted RBP6.37□□□□□ -1.39
NPAS3-212ENST00000552696 SOX11P35716 441 aa6.37□□□□□ -1.39
NPAS3-212ENST00000552696 SMCPP49901 116 aaPredicted RBP6.37□□□□□ -1.39
NPAS3-212ENST00000552696 DHX9Q08211 1270 aaKnown RBP6.37□□□□□ -1.39
NPAS3-212ENST00000552696 SEMA3FQ13275 785 aa6.37□□□□□ -1.39
NPAS3-212ENST00000552696 SEPT12Q8IYM1 358 aa6.37□□□□□ -1.39
NPAS3-212ENST00000552696 EMILIN1Q9Y6C2 1016 aa6.37□□□□□ -1.39
NPAS3-212ENST00000552696 ADAMTS19Q8TE59 1207 aa6.36□□□□□ -1.39
NPAS3-212ENST00000552696 TMPRSS4Q9NRS4 437 aa6.36□□□□□ -1.39
NPAS3-212ENST00000552696 CEP126Q9P2H0 1117 aa6.36□□□□□ -1.39
NPAS3-212ENST00000552696 BMP1P13497 986 aa6.35□□□□□ -1.39
NPAS3-212ENST00000552696 RNF20Q5VTR2 975 aa6.35□□□□□ -1.39
NPAS3-212ENST00000552696 ZNF784Q8NCA9 323 aaPredicted RBP6.35□□□□□ -1.39
NPAS3-212ENST00000552696 PGPEP1Q9NXJ5 209 aa6.35□□□□□ -1.39
NPAS3-212ENST00000552696 SLFNL1Q499Z3 407 aa6.34□□□□□ -1.39
NPAS3-212ENST00000552696 C14orf37Q86TY3 774 aa6.34□□□□□ -1.39
NPAS3-212ENST00000552696 RNF135Q8IUD6 432 aa6.34□□□□□ -1.39
NPAS3-212ENST00000552696 CCDC85AQ96PX6 553 aaPredicted RBP6.34□□□□□ -1.39
NPAS3-212ENST00000552696 ALG2Q9H553 416 aa6.34□□□□□ -1.39
NPAS3-212ENST00000552696 CYLDQ9NQC7 956 aa6.34□□□□□ -1.39
NPAS3-212ENST00000552696 DACH1Q9UI36 760 aa6.34□□□□□ -1.39
NPAS3-212ENST00000552696 PCDHB11Q9Y5F2 797 aa6.34□□□□□ -1.39
NPAS3-212ENST00000552696 PIK3CDO00329 1044 aa6.33□□□□□ -1.4
NPAS3-212ENST00000552696 TRAK2O60296 914 aa6.33□□□□□ -1.4
NPAS3-212ENST00000552696 CBLBQ13191 982 aa6.33□□□□□ -1.4
NPAS3-212ENST00000552696 MEIOBQ8N635 442 aa6.33□□□□□ -1.4
NPAS3-212ENST00000552696 GLMNQ92990 594 aa6.33□□□□□ -1.4
NPAS3-212ENST00000552696 ZMYND15Q9H091 742 aa6.33□□□□□ -1.4
NPAS3-212ENST00000552696 ATP13A2Q9NQ11 1180 aa6.33□□□□□ -1.4
NPAS3-212ENST00000552696 LILRA1O75019 489 aa6.32□□□□□ -1.4
NPAS3-212ENST00000552696 HDGFL1Q5TGJ6 251 aa6.32□□□□□ -1.4
NPAS3-212ENST00000552696 TRIM46Q7Z4K8 759 aa6.32□□□□□ -1.4
NPAS3-212ENST00000552696 PHTF2Q8N3S3 785 aa6.32□□□□□ -1.4
NPAS3-212ENST00000552696 DOLKQ9UPQ8 538 aa6.32□□□□□ -1.4
NPAS3-212ENST00000552696 SCTRP47872 440 aa6.31□□□□□ -1.4
NPAS3-212ENST00000552696 TSGA10IPQ3SY00 556 aa6.31□□□□□ -1.4
NPAS3-212ENST00000552696 MRPL14Q6P1L8 145 aaKnown RBP6.31□□□□□ -1.4
NPAS3-212ENST00000552696 CCDC125Q86Z20 511 aa6.31□□□□□ -1.4
NPAS3-212ENST00000552696 UCN2Q96RP3 112 aa6.31□□□□□ -1.4
NPAS3-212ENST00000552696 CDCA7Q9BWT1 371 aaPredicted RBP6.31□□□□□ -1.4
NPAS3-212ENST00000552696 ADD1P35611 737 aaKnown RBP6.3□□□□□ -1.4
NPAS3-212ENST00000552696 ERVK-9P63128 1117 aa6.3□□□□□ -1.4
NPAS3-212ENST00000552696 Q6ZVU0 165 aa6.3□□□□□ -1.4
NPAS3-212ENST00000552696 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
NPAS3-212ENST00000552696 PLPP7Q8NBV4 271 aa6.3□□□□□ -1.4
NPAS3-212ENST00000552696 ZNF777Q9ULD5 760 aaPredicted RBP6.3□□□□□ -1.4
NPAS3-212ENST00000552696 ADH1AP07327 375 aa6.29□□□□□ -1.4
NPAS3-212ENST00000552696 SKIP12755 728 aa6.29□□□□□ -1.4
NPAS3-212ENST00000552696 OXLD1Q5BKU9 147 aa6.29□□□□□ -1.4
NPAS3-212ENST00000552696 C6orf118Q5T5N4 469 aa6.29□□□□□ -1.4
NPAS3-212ENST00000552696 CC2D2BQ6DHV5 1058 aa6.29□□□□□ -1.4
NPAS3-212ENST00000552696 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
NPAS3-212ENST00000552696 AGBL1Q96MI9 1066 aa6.29□□□□□ -1.4
NPAS3-212ENST00000552696 PURBQ96QR8 312 aaKnown RBP6.29□□□□□ -1.4
NPAS3-212ENST00000552696 GMPR2Q9P2T1 348 aaKnown RBP6.29□□□□□ -1.4
NPAS3-212ENST00000552696 CHIC2Q9UKJ5 165 aa6.29□□□□□ -1.4
NPAS3-212ENST00000552696 POTECB2RU33 542 aa6.28□□□□□ -1.4
NPAS3-212ENST00000552696 BMP2P12643 396 aa6.28□□□□□ -1.4
NPAS3-212ENST00000552696 RELBQ01201 579 aa6.28□□□□□ -1.4
NPAS3-212ENST00000552696 SCARF1Q14162 830 aa6.28□□□□□ -1.4
NPAS3-212ENST00000552696 TRIM52Q96A61 297 aa6.28□□□□□ -1.4
NPAS3-212ENST00000552696 TSEN34Q9BSV6 310 aaKnown RBP6.28□□□□□ -1.4
NPAS3-212ENST00000552696 UPP2O95045 317 aa6.27□□□□□ -1.41
NPAS3-212ENST00000552696 MYCP01106 439 aaPredicted RBP6.27□□□□□ -1.41
NPAS3-212ENST00000552696 MAP7D1Q3KQU3 841 aa6.27□□□□□ -1.41
NPAS3-212ENST00000552696 NFATC2IPQ8NCF5 419 aa6.27□□□□□ -1.41
NPAS3-212ENST00000552696 ZFP42Q96MM3 310 aa6.27□□□□□ -1.41
NPAS3-212ENST00000552696 OSBPL3Q9H4L5 887 aa6.27□□□□□ -1.41
NPAS3-212ENST00000552696 USP17L5A8MUK1 530 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms