RNA–Protein interactions for RNA: ENST00000552624.5

SYT1-211, Transcript of synaptotagmin 1, humanhuman

TSL 5

Gene SYT1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-211ENST00000552624 PXDNQ92626 1479 aa12□□□□□ -0.49
SYT1-211ENST00000552624 TNKS1BP1Q9C0C2 1729 aaKnown RBP12□□□□□ -0.49
SYT1-211ENST00000552624 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
SYT1-211ENST00000552624 ESCO1Q5FWF5 840 aa11.99□□□□□ -0.49
SYT1-211ENST00000552624 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
SYT1-211ENST00000552624 NPHP3Q7Z494 1330 aa11.99□□□□□ -0.49
SYT1-211ENST00000552624 CLTCL1P53675 1640 aa11.98□□□□□ -0.49
SYT1-211ENST00000552624 FOXO3O43524 673 aa11.98□□□□□ -0.49
SYT1-211ENST00000552624 UNC5CLQ8IV45 518 aa11.98□□□□□ -0.49
SYT1-211ENST00000552624 SLIT2O94813 1529 aa11.97□□□□□ -0.49
SYT1-211ENST00000552624 ROCK1Q13464 1354 aa11.97□□□□□ -0.49
SYT1-211ENST00000552624 SEPT12Q8IYM1 358 aa11.97□□□□□ -0.49
SYT1-211ENST00000552624 HRCP23327 699 aa11.96□□□□□ -0.49
SYT1-211ENST00000552624 NUTM2FA1L443 756 aa11.95□□□□□ -0.5
SYT1-211ENST00000552624 DPYSL4O14531 572 aa11.95□□□□□ -0.5
SYT1-211ENST00000552624 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
SYT1-211ENST00000552624 CDC42BPGQ6DT37 1551 aa11.94□□□□□ -0.5
SYT1-211ENST00000552624 ITGAEP38570 1179 aa11.94□□□□□ -0.5
SYT1-211ENST00000552624 SLAIN1Q8ND83 568 aa11.94□□□□□ -0.5
SYT1-211ENST00000552624 KIF1BO60333 1816 aa11.94□□□□□ -0.5
SYT1-211ENST00000552624 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
SYT1-211ENST00000552624 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
SYT1-211ENST00000552624 KRT27Q7Z3Y8 459 aa11.92□□□□□ -0.5
SYT1-211ENST00000552624 CCDC9Q9Y3X0 531 aaKnown RBP11.92□□□□□ -0.5
SYT1-211ENST00000552624 SPATA31A3Q5VYP0 1347 aa11.91□□□□□ -0.5
SYT1-211ENST00000552624 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
SYT1-211ENST00000552624 BAG6P46379 1132 aa11.91□□□□□ -0.5
SYT1-211ENST00000552624 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
SYT1-211ENST00000552624 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
SYT1-211ENST00000552624 NAIPQ13075 1403 aa11.91□□□□□ -0.5
SYT1-211ENST00000552624 LRPPRCP42704 1394 aaKnown RBP11.91□□□□□ -0.5
SYT1-211ENST00000552624 SEMA3EO15041 775 aa11.9□□□□□ -0.5
SYT1-211ENST00000552624 SLC34A2O95436 690 aa11.9□□□□□ -0.5
SYT1-211ENST00000552624 VPS72Q15906 364 aa11.9□□□□□ -0.5
SYT1-211ENST00000552624 CABLES1Q8TDN4 633 aa11.9□□□□□ -0.5
SYT1-211ENST00000552624 PLCH1Q4KWH8 1693 aa11.9□□□□□ -0.5
SYT1-211ENST00000552624 A0A0G2JS52 829 aa11.89□□□□□ -0.51
SYT1-211ENST00000552624 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
SYT1-211ENST00000552624 MYT1Q01538 1121 aa11.89□□□□□ -0.51
SYT1-211ENST00000552624 EN1Q05925 392 aaPredicted RBP11.89□□□□□ -0.51
SYT1-211ENST00000552624 R3HDM1Q15032 1099 aaKnown RBP11.89□□□□□ -0.51
SYT1-211ENST00000552624 PDIA6Q15084 440 aa11.89□□□□□ -0.51
SYT1-211ENST00000552624 WAPLQ7Z5K2 1190 aa11.89□□□□□ -0.51
SYT1-211ENST00000552624 TBC1D12O60347 775 aa11.88□□□□□ -0.51
SYT1-211ENST00000552624 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
SYT1-211ENST00000552624 PTCD2Q8WV60 388 aaKnown RBP11.88□□□□□ -0.51
SYT1-211ENST00000552624 NWD2Q9ULI1 1742 aa11.87□□□□□ -0.51
SYT1-211ENST00000552624 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
SYT1-211ENST00000552624 FAM182BQ5T319 152 aa11.87□□□□□ -0.51
SYT1-211ENST00000552624 KRT28Q7Z3Y7 464 aa11.87□□□□□ -0.51
SYT1-211ENST00000552624 STK26Q9P289 416 aa11.87□□□□□ -0.51
SYT1-211ENST00000552624 PPLO60437 1756 aa11.87□□□□□ -0.51
SYT1-211ENST00000552624 CCDC144AA2RUR9 1427 aa11.86□□□□□ -0.51
SYT1-211ENST00000552624 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
SYT1-211ENST00000552624 LHX8Q68G74 356 aa11.86□□□□□ -0.51
SYT1-211ENST00000552624 PLEKHH1Q9ULM0 1364 aa11.86□□□□□ -0.51
SYT1-211ENST00000552624 KIF1AQ12756 1690 aa11.86□□□□□ -0.51
SYT1-211ENST00000552624 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
SYT1-211ENST00000552624 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
SYT1-211ENST00000552624 YY1P25490 414 aa11.85□□□□□ -0.51
SYT1-211ENST00000552624 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
SYT1-211ENST00000552624 RPGRIP1LQ68CZ1 1315 aa11.85□□□□□ -0.51
SYT1-211ENST00000552624 RGPD1P0DJD0 1748 aa11.84□□□□□ -0.51
SYT1-211ENST00000552624 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
SYT1-211ENST00000552624 SMYD5Q6GMV2 418 aa11.84□□□□□ -0.51
SYT1-211ENST00000552624 LMOD2Q6P5Q4 547 aa11.84□□□□□ -0.51
SYT1-211ENST00000552624 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
SYT1-211ENST00000552624 FAM83GA6ND36 823 aa11.83□□□□□ -0.52
SYT1-211ENST00000552624 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
SYT1-211ENST00000552624 ADGRF5Q8IZF2 1346 aa11.83□□□□□ -0.52
SYT1-211ENST00000552624 NRAPQ86VF7 1730 aa11.83□□□□□ -0.52
SYT1-211ENST00000552624 EZH2Q15910 746 aaKnown RBP11.82□□□□□ -0.52
SYT1-211ENST00000552624 OTUD5Q96G74 571 aa11.82□□□□□ -0.52
SYT1-211ENST00000552624 TECPR2O15040 1411 aa11.82□□□□□ -0.52
SYT1-211ENST00000552624 TNS1Q9HBL0 1735 aaKnown RBP11.82□□□□□ -0.52
SYT1-211ENST00000552624 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
SYT1-211ENST00000552624 EVI5O60447 810 aa11.81□□□□□ -0.52
SYT1-211ENST00000552624 PSME1Q06323 249 aa11.81□□□□□ -0.52
SYT1-211ENST00000552624 TMEM132EQ6IEE7 984 aa11.81□□□□□ -0.52
SYT1-211ENST00000552624 PCDHGA4Q9Y5G9 962 aa11.81□□□□□ -0.52
SYT1-211ENST00000552624 KNDC1Q76NI1 1749 aa11.8□□□□□ -0.52
SYT1-211ENST00000552624 DISP2A7MBM2 1401 aa11.8□□□□□ -0.52
SYT1-211ENST00000552624 BTG4Q9NY30 223 aa11.8□□□□□ -0.52
SYT1-211ENST00000552624 IFT172Q9UG01 1749 aa11.8□□□□□ -0.52
SYT1-211ENST00000552624 RRBP1Q9P2E9 1410 aaKnown RBP11.79□□□□□ -0.52
SYT1-211ENST00000552624 HOXB3P14651 431 aaPredicted RBP11.79□□□□□ -0.52
SYT1-211ENST00000552624 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
SYT1-211ENST00000552624 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
SYT1-211ENST00000552624 ARHGEF10O15013 1369 aa11.79□□□□□ -0.52
SYT1-211ENST00000552624 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
SYT1-211ENST00000552624 NRXN1Q9ULB1 1477 aa11.78□□□□□ -0.52
SYT1-211ENST00000552624 SNPHO15079 494 aa11.78□□□□□ -0.52
SYT1-211ENST00000552624 MLLT3P42568 568 aaPredicted RBP11.78□□□□□ -0.52
SYT1-211ENST00000552624 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
SYT1-211ENST00000552624 TRIM37O94972 964 aa11.77□□□□□ -0.53
SYT1-211ENST00000552624 RGL3Q3MIN7 710 aa11.77□□□□□ -0.53
SYT1-211ENST00000552624 CAMKK2Q96RR4 588 aa11.77□□□□□ -0.53
SYT1-211ENST00000552624 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
SYT1-211ENST00000552624 THSD7AQ9UPZ6 1657 aa11.77□□□□□ -0.53
SYT1-211ENST00000552624 ADGRB2O60241 1585 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms