RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 COL5A2P05997 1499 aaPredicted RBP12.6□□□□□ -0.39
CCDC59-207ENST00000552606 GCP02774 474 aa12.6□□□□□ -0.39
CCDC59-207ENST00000552606 MEX3CQ5U5Q3 659 aaKnown RBP12.6□□□□□ -0.39
CCDC59-207ENST00000552606 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
CCDC59-207ENST00000552606 RGS17Q9UGC6 210 aaPredicted RBP12.6□□□□□ -0.39
CCDC59-207ENST00000552606 ATRNO75882 1429 aa12.6□□□□□ -0.39
CCDC59-207ENST00000552606 AFF2P51816 1311 aa12.6□□□□□ -0.39
CCDC59-207ENST00000552606 CGNL1Q0VF96 1302 aa12.6□□□□□ -0.39
CCDC59-207ENST00000552606 THSD7AQ9UPZ6 1657 aa12.59□□□□□ -0.39
CCDC59-207ENST00000552606 PER1O15534 1290 aaPredicted RBP12.59□□□□□ -0.39
CCDC59-207ENST00000552606 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
CCDC59-207ENST00000552606 FNBP4Q8N3X1 1017 aaPredicted RBP12.59□□□□□ -0.39
CCDC59-207ENST00000552606 BRWD3Q6RI45 1802 aa12.59□□□□□ -0.39
CCDC59-207ENST00000552606 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
CCDC59-207ENST00000552606 AATKQ6ZMQ8 1374 aa12.58□□□□□ -0.4
CCDC59-207ENST00000552606 NPC1L1Q9UHC9 1359 aa12.58□□□□□ -0.4
CCDC59-207ENST00000552606 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
CCDC59-207ENST00000552606 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
CCDC59-207ENST00000552606 GGNBP2Q9H3C7 697 aa12.58□□□□□ -0.4
CCDC59-207ENST00000552606 FAM83GA6ND36 823 aa12.57□□□□□ -0.4
CCDC59-207ENST00000552606 KCNH5Q8NCM2 988 aa12.57□□□□□ -0.4
CCDC59-207ENST00000552606 PARP4Q9UKK3 1724 aaKnown RBP12.57□□□□□ -0.4
CCDC59-207ENST00000552606 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
CCDC59-207ENST00000552606 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
CCDC59-207ENST00000552606 ARHGEF25Q86VW2 580 aa12.56□□□□□ -0.4
CCDC59-207ENST00000552606 COG3Q96JB2 828 aa12.56□□□□□ -0.4
CCDC59-207ENST00000552606 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
CCDC59-207ENST00000552606 RGPD1P0DJD0 1748 aa12.56□□□□□ -0.4
CCDC59-207ENST00000552606 BLMP54132 1417 aaPredicted RBP12.55□□□□□ -0.4
CCDC59-207ENST00000552606 CHRNA2Q15822 529 aa12.55□□□□□ -0.4
CCDC59-207ENST00000552606 LRRC37A3O60309 1634 aa12.55□□□□□ -0.4
CCDC59-207ENST00000552606 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
CCDC59-207ENST00000552606 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
CCDC59-207ENST00000552606 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
CCDC59-207ENST00000552606 SOX12O15370 315 aa12.53□□□□□ -0.4
CCDC59-207ENST00000552606 ZNF772Q68DY9 489 aaPredicted RBP12.53□□□□□ -0.4
CCDC59-207ENST00000552606 POTEAQ6S8J7 498 aa12.53□□□□□ -0.4
CCDC59-207ENST00000552606 USP21Q9UK80 565 aa12.53□□□□□ -0.4
CCDC59-207ENST00000552606 KNSTRNQ9Y448 316 aa12.53□□□□□ -0.4
CCDC59-207ENST00000552606 MAP3K19Q56UN5 1328 aa12.53□□□□□ -0.4
CCDC59-207ENST00000552606 KIF24Q5T7B8 1368 aa12.53□□□□□ -0.4
CCDC59-207ENST00000552606 UNC5CLQ8IV45 518 aa12.52□□□□□ -0.41
CCDC59-207ENST00000552606 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
CCDC59-207ENST00000552606 RGS12O14924 1447 aa12.52□□□□□ -0.41
CCDC59-207ENST00000552606 FBLN1P23142 703 aa12.51□□□□□ -0.41
CCDC59-207ENST00000552606 AXIN2Q9Y2T1 843 aa12.51□□□□□ -0.41
CCDC59-207ENST00000552606 FLT4P35916 1363 aa12.51□□□□□ -0.41
CCDC59-207ENST00000552606 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
CCDC59-207ENST00000552606 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
CCDC59-207ENST00000552606 TRPC5Q9UL62 973 aaPredicted RBP12.5□□□□□ -0.41
CCDC59-207ENST00000552606 CRB1P82279 1406 aa12.5□□□□□ -0.41
CCDC59-207ENST00000552606 COL3A1P02461 1466 aaPredicted RBP12.5□□□□□ -0.41
CCDC59-207ENST00000552606 PKD1L3Q7Z443 1732 aa12.5□□□□□ -0.41
CCDC59-207ENST00000552606 NCAPD2Q15021 1401 aa12.49□□□□□ -0.41
CCDC59-207ENST00000552606 ERBB3P21860 1342 aa12.49□□□□□ -0.41
CCDC59-207ENST00000552606 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
CCDC59-207ENST00000552606 RRS1Q15050 365 aaKnown RBP12.49□□□□□ -0.41
CCDC59-207ENST00000552606 VPS72Q15906 364 aa12.49□□□□□ -0.41
CCDC59-207ENST00000552606 INSRP06213 1382 aa12.48□□□□□ -0.41
CCDC59-207ENST00000552606 PARD3Q8TEW0 1356 aa12.48□□□□□ -0.41
CCDC59-207ENST00000552606 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
CCDC59-207ENST00000552606 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
CCDC59-207ENST00000552606 WDR17Q8IZU2 1322 aa12.48□□□□□ -0.41
CCDC59-207ENST00000552606 HOXC9P31274 260 aa12.48□□□□□ -0.41
CCDC59-207ENST00000552606 IP6K1Q92551 441 aa12.48□□□□□ -0.41
CCDC59-207ENST00000552606 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
CCDC59-207ENST00000552606 DISP2A7MBM2 1401 aa12.47□□□□□ -0.41
CCDC59-207ENST00000552606 VIRMAQ69YN4 1812 aaKnown RBP12.47□□□□□ -0.41
CCDC59-207ENST00000552606 SBF2Q86WG5 1849 aa12.47□□□□□ -0.41
CCDC59-207ENST00000552606 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
CCDC59-207ENST00000552606 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
CCDC59-207ENST00000552606 QTRT2Q9H974 415 aaKnown RBP12.47□□□□□ -0.41
CCDC59-207ENST00000552606 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
CCDC59-207ENST00000552606 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.41
CCDC59-207ENST00000552606 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
CCDC59-207ENST00000552606 MORC1Q86VD1 984 aa12.46□□□□□ -0.41
CCDC59-207ENST00000552606 GJD4Q96KN9 370 aaPredicted RBP12.46□□□□□ -0.41
CCDC59-207ENST00000552606 STRN4Q9NRL3 753 aa12.46□□□□□ -0.41
CCDC59-207ENST00000552606 POLKQ9UBT6 870 aa12.46□□□□□ -0.41
CCDC59-207ENST00000552606 RBM6P78332 1123 aaKnown RBP12.45□□□□□ -0.42
CCDC59-207ENST00000552606 TNNT2P45379 298 aaPredicted RBP12.44□□□□□ -0.42
CCDC59-207ENST00000552606 TNS1Q9HBL0 1735 aaKnown RBP12.43□□□□□ -0.42
CCDC59-207ENST00000552606 AMPHP49418 695 aa12.43□□□□□ -0.42
CCDC59-207ENST00000552606 HSP90AB2PQ58FF8 381 aa12.43□□□□□ -0.42
CCDC59-207ENST00000552606 ANKRD24Q8TF21 1146 aa12.43□□□□□ -0.42
CCDC59-207ENST00000552606 MEGF6O75095 1541 aa12.42□□□□□ -0.42
CCDC59-207ENST00000552606 RXRBP28702 533 aa12.42□□□□□ -0.42
CCDC59-207ENST00000552606 ILDR2Q71H61 639 aa12.42□□□□□ -0.42
CCDC59-207ENST00000552606 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
CCDC59-207ENST00000552606 TNS2Q63HR2 1409 aa12.42□□□□□ -0.42
CCDC59-207ENST00000552606 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
CCDC59-207ENST00000552606 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
CCDC59-207ENST00000552606 DOT1LQ8TEK3 1739 aa12.41□□□□□ -0.42
CCDC59-207ENST00000552606 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
CCDC59-207ENST00000552606 EP400Q96L91 3159 aa12.4□□□□□ -0.42
CCDC59-207ENST00000552606 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.42
CCDC59-207ENST00000552606 HAX1O00165 279 aa12.4□□□□□ -0.42
CCDC59-207ENST00000552606 EVA1CP58658 441 aa12.4□□□□□ -0.42
CCDC59-207ENST00000552606 TOM1L2Q6ZVM7 507 aa12.4□□□□□ -0.42
CCDC59-207ENST00000552606 TCP11L2Q8N4U5 519 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms