RNA–Protein interactions for RNA: ENST00000552546.5

TMEM106C-219, Transcript of transmembrane protein 106C, humanhuman

TSL 4 BASIC

Gene TMEM106C, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-219ENST00000552546 TBC1D12O60347 775 aa11.05□□□□□ -0.64
TMEM106C-219ENST00000552546 UPF1Q92900 1129 aaKnown RBP eCLIP11.05□□□□□ -0.647e-6■■■■□ 24.4
TMEM106C-219ENST00000552546 SLAIN2Q9P270 581 aa11.04□□□□□ -0.64
TMEM106C-219ENST00000552546 CHD2O14647 1828 aaKnown RBP11.04□□□□□ -0.64
TMEM106C-219ENST00000552546 KIAA1210Q9ULL0 1709 aa11.04□□□□□ -0.64
TMEM106C-219ENST00000552546 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
TMEM106C-219ENST00000552546 WASLO00401 505 aaPredicted RBP11.03□□□□□ -0.64
TMEM106C-219ENST00000552546 EIF4G2P78344 907 aaKnown RBP eCLIP11.03□□□□□ -0.64
TMEM106C-219ENST00000552546 SETD1AO15047 1707 aaKnown RBP11.03□□□□□ -0.64
TMEM106C-219ENST00000552546 XRN1Q8IZH2 1706 aaKnown RBP11.03□□□□□ -0.64
TMEM106C-219ENST00000552546 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
TMEM106C-219ENST00000552546 ADGRL3Q9HAR2 1447 aa11.02□□□□□ -0.64
TMEM106C-219ENST00000552546 PDIA6Q15084 440 aa11.02□□□□□ -0.65
TMEM106C-219ENST00000552546 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
TMEM106C-219ENST00000552546 HIRIP3Q9BW71 556 aaPredicted RBP11.02□□□□□ -0.65
TMEM106C-219ENST00000552546 DCCP43146 1447 aa11.01□□□□□ -0.65
TMEM106C-219ENST00000552546 SEMA3EO15041 775 aa11.01□□□□□ -0.65
TMEM106C-219ENST00000552546 CDK19Q9BWU1 502 aa11.01□□□□□ -0.65
TMEM106C-219ENST00000552546 TRPM1Q7Z4N2 1603 aa11.01□□□□□ -0.65
TMEM106C-219ENST00000552546 USP47Q96K76 1375 aa11.01□□□□□ -0.65
TMEM106C-219ENST00000552546 SNPHO15079 494 aa11□□□□□ -0.65
TMEM106C-219ENST00000552546 FBXO41Q8TF61 875 aa11□□□□□ -0.65
TMEM106C-219ENST00000552546 TESK2Q96S53 571 aa11□□□□□ -0.65
TMEM106C-219ENST00000552546 EVC2Q86UK5 1308 aa11□□□□□ -0.65
TMEM106C-219ENST00000552546 STRCP1A6NGW2 1772 aa11□□□□□ -0.65
TMEM106C-219ENST00000552546 TESPA1A2RU30 521 aaPredicted RBP10.99□□□□□ -0.65
TMEM106C-219ENST00000552546 RIMBP2O15034 1052 aa10.99□□□□□ -0.65
TMEM106C-219ENST00000552546 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
TMEM106C-219ENST00000552546 PUS7Q96PZ0 661 aaKnown RBP10.99□□□□□ -0.65
TMEM106C-219ENST00000552546 SBNO2Q9Y2G9 1366 aa10.99□□□□□ -0.65
TMEM106C-219ENST00000552546 TULP1O00294 542 aaPredicted RBP10.98□□□□□ -0.65
TMEM106C-219ENST00000552546 HSPA5P11021 654 aaKnown RBP10.98□□□□□ -0.65
TMEM106C-219ENST00000552546 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
TMEM106C-219ENST00000552546 PCDHGA4Q9Y5G9 962 aa10.98□□□□□ -0.65
TMEM106C-219ENST00000552546 NUTM2FA1L443 756 aa10.97□□□□□ -0.65
TMEM106C-219ENST00000552546 SRPK2P78362 688 aaKnown RBP10.97□□□□□ -0.65
TMEM106C-219ENST00000552546 TMF1P82094 1093 aa10.97□□□□□ -0.65
TMEM106C-219ENST00000552546 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
TMEM106C-219ENST00000552546 ESCO1Q5FWF5 840 aa10.97□□□□□ -0.65
TMEM106C-219ENST00000552546 SMYD5Q6GMV2 418 aa10.97□□□□□ -0.65
TMEM106C-219ENST00000552546 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
TMEM106C-219ENST00000552546 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
TMEM106C-219ENST00000552546 EVI5O60447 810 aa10.96□□□□□ -0.65
TMEM106C-219ENST00000552546 BRINP3Q76B58 766 aa10.96□□□□□ -0.65
TMEM106C-219ENST00000552546 ZNF710Q8N1W2 664 aa10.96□□□□□ -0.65
TMEM106C-219ENST00000552546 ORAI2Q96SN7 254 aa10.96□□□□□ -0.65
TMEM106C-219ENST00000552546 KNDC1Q76NI1 1749 aa10.95□□□□□ -0.66
TMEM106C-219ENST00000552546 MST1RQ04912 1400 aa10.95□□□□□ -0.66
TMEM106C-219ENST00000552546 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
TMEM106C-219ENST00000552546 C1orf167Q5SNV9 1468 aa10.94□□□□□ -0.66
TMEM106C-219ENST00000552546 ANKARQ7Z5J8 1434 aa10.94□□□□□ -0.66
TMEM106C-219ENST00000552546 PRR36Q9H6K5 1346 aa10.94□□□□□ -0.66
TMEM106C-219ENST00000552546 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
TMEM106C-219ENST00000552546 ANO8Q9HCE9 1232 aaPredicted RBP10.94□□□□□ -0.66
TMEM106C-219ENST00000552546 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.93□□□□□ -0.66
TMEM106C-219ENST00000552546 PTGER2P43116 358 aa10.93□□□□□ -0.66
TMEM106C-219ENST00000552546 CABP1Q9NZU7 370 aa10.93□□□□□ -0.66
TMEM106C-219ENST00000552546 CDC42BPGQ6DT37 1551 aa10.92□□□□□ -0.66
TMEM106C-219ENST00000552546 FOXO3O43524 673 aa10.92□□□□□ -0.66
TMEM106C-219ENST00000552546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.92□□□□□ -0.66
TMEM106C-219ENST00000552546 ATAD2Q6PL18 1390 aa10.91□□□□□ -0.66
TMEM106C-219ENST00000552546 MLLT3P42568 568 aaPredicted RBP10.91□□□□□ -0.66
TMEM106C-219ENST00000552546 PSME1Q06323 249 aa10.91□□□□□ -0.66
TMEM106C-219ENST00000552546 ARSIQ5FYB1 569 aa10.91□□□□□ -0.66
TMEM106C-219ENST00000552546 GPR153Q6NV75 609 aa10.91□□□□□ -0.66
TMEM106C-219ENST00000552546 NGDNQ8NEJ9 315 aaKnown RBP10.91□□□□□ -0.66
TMEM106C-219ENST00000552546 PMFBP1Q8TBY8 1022 aa10.91□□□□□ -0.66
TMEM106C-219ENST00000552546 ADGRB2O60241 1585 aa10.9□□□□□ -0.66
TMEM106C-219ENST00000552546 NPHP3Q7Z494 1330 aa10.9□□□□□ -0.66
TMEM106C-219ENST00000552546 ARHGEF28Q8N1W1 1705 aaKnown RBP10.89□□□□□ -0.67
TMEM106C-219ENST00000552546 HSPA1LP34931 641 aa10.89□□□□□ -0.67
TMEM106C-219ENST00000552546 KRT28Q7Z3Y7 464 aa10.89□□□□□ -0.67
TMEM106C-219ENST00000552546 TMC1Q8TDI8 760 aa10.89□□□□□ -0.67
TMEM106C-219ENST00000552546 LRRC59Q96AG4 307 aaKnown RBP10.89□□□□□ -0.67
TMEM106C-219ENST00000552546 SLC12A5Q9H2X9 1139 aa10.89□□□□□ -0.67
TMEM106C-219ENST00000552546 DISP3Q9P2K9 1392 aa10.89□□□□□ -0.67
TMEM106C-219ENST00000552546 TULP4Q9NRJ4 1543 aa10.89□□□□□ -0.67
TMEM106C-219ENST00000552546 XIRP1Q702N8 1843 aaKnown RBP10.88□□□□□ -0.67
TMEM106C-219ENST00000552546 ACEP12821 1306 aa10.88□□□□□ -0.67
TMEM106C-219ENST00000552546 SOS2Q07890 1332 aaPredicted RBP10.88□□□□□ -0.67
TMEM106C-219ENST00000552546 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
TMEM106C-219ENST00000552546 DDX17Q92841 729 aaKnown RBP10.88□□□□□ -0.67
TMEM106C-219ENST00000552546 TERF2IPQ9NYB0 399 aa10.88□□□□□ -0.67
TMEM106C-219ENST00000552546 NALCNQ8IZF0 1738 aa10.87□□□□□ -0.67
TMEM106C-219ENST00000552546 PPIP5K1Q6PFW1 1433 aa10.87□□□□□ -0.67
TMEM106C-219ENST00000552546 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
TMEM106C-219ENST00000552546 LMOD2Q6P5Q4 547 aa10.87□□□□□ -0.67
TMEM106C-219ENST00000552546 POLR3AO14802 1390 aaPredicted RBP10.87□□□□□ -0.67
TMEM106C-219ENST00000552546 NINLQ9Y2I6 1382 aa10.87□□□□□ -0.67
TMEM106C-219ENST00000552546 ATP7BP35670 1465 aa10.87□□□□□ -0.67
TMEM106C-219ENST00000552546 NUDT7P0C024 238 aa10.86□□□□□ -0.67
TMEM106C-219ENST00000552546 HDGFL2Q7Z4V5 671 aaPredicted RBP10.86□□□□□ -0.67
TMEM106C-219ENST00000552546 DDX12PQ92771 950 aa10.86□□□□□ -0.67
TMEM106C-219ENST00000552546 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.671e-6■■■■□ 21.2
TMEM106C-219ENST00000552546 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
TMEM106C-219ENST00000552546 XPCQ01831 940 aaPredicted RBP10.85□□□□□ -0.67
TMEM106C-219ENST00000552546 POLR3GLQ9BT43 218 aa10.85□□□□□ -0.67
TMEM106C-219ENST00000552546 KIF7Q2M1P5 1343 aa10.84□□□□□ -0.67
TMEM106C-219ENST00000552546 BRD4O60885 1362 aaPredicted RBP10.84□□□□□ -0.67
TMEM106C-219ENST00000552546 QRICH2Q9H0J4 1663 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms