RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	TCP11L2	Q8N4U5	519 aa		10.07	□□□□□ -0.8
RPH3A-223	ENST00000552352	CDK19	Q9BWU1	502 aa		10.07	□□□□□ -0.8
RPH3A-223	ENST00000552352	MON2	Q7Z3U7	1717 aa		10.07	□□□□□ -0.8
RPH3A-223	ENST00000552352	BCL2L13	Q9BXK5	485 aa		10.07	□□□□□ -0.8
RPH3A-223	ENST00000552352	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.07	□□□□□ -0.8
RPH3A-223	ENST00000552352	EDC4	Q6P2E9	1401 aa	Known RBP	10.07	□□□□□ -0.8
RPH3A-223	ENST00000552352	NEUROD2	Q15784	382 aa		10.06	□□□□□ -0.8
RPH3A-223	ENST00000552352	RRP7A	Q9Y3A4	280 aa	Known RBP	10.06	□□□□□ -0.8
RPH3A-223	ENST00000552352	TOPAZ1	Q8N9V7	1692 aa		10.06	□□□□□ -0.8
RPH3A-223	ENST00000552352	HDAC1	Q13547	482 aa	Predicted RBP	10.06	□□□□□ -0.8
RPH3A-223	ENST00000552352	AKAP12	Q02952	1782 aa		10.06	□□□□□ -0.8
RPH3A-223	ENST00000552352	MTHFS	P49914	203 aa		10.05	□□□□□ -0.8
RPH3A-223	ENST00000552352	ZKSCAN2	Q63HK3	967 aa		10.05	□□□□□ -0.8
RPH3A-223	ENST00000552352	TULP1	O00294	542 aa	Predicted RBP	10.05	□□□□□ -0.8
RPH3A-223	ENST00000552352	FTSJ3	Q8IY81	847 aa	Known RBP	10.05	□□□□□ -0.8
RPH3A-223	ENST00000552352	DZIP1L	Q8IYY4	767 aa	Known RBP	10.05	□□□□□ -0.8
RPH3A-223	ENST00000552352	SNX21	Q969T3	373 aa		10.05	□□□□□ -0.8
RPH3A-223	ENST00000552352	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.05	□□□□□ -0.8
RPH3A-223	ENST00000552352	ERBB4	Q15303	1308 aa		10.05	□□□□□ -0.8
RPH3A-223	ENST00000552352	PTCH1	Q13635	1447 aa		10.05	□□□□□ -0.8
RPH3A-223	ENST00000552352	WASL	O00401	505 aa	Predicted RBP	10.04	□□□□□ -0.8
RPH3A-223	ENST00000552352	FYB1	O15117	783 aa		10.04	□□□□□ -0.8
RPH3A-223	ENST00000552352	CT47B1	P0C2W7	299 aa	Predicted RBP	10.04	□□□□□ -0.8
RPH3A-223	ENST00000552352	PTMS	P20962	102 aa		10.04	□□□□□ -0.8
RPH3A-223	ENST00000552352	RBM25	P49756	843 aa	Known RBP	10.04	□□□□□ -0.8
RPH3A-223	ENST00000552352	VSIG10	Q8N0Z9	540 aa		10.04	□□□□□ -0.8
RPH3A-223	ENST00000552352	TRIM44	Q96DX7	344 aa	Predicted RBP	10.04	□□□□□ -0.8
RPH3A-223	ENST00000552352	SMC5	Q8IY18	1101 aa		10.04	□□□□□ -0.8
RPH3A-223	ENST00000552352	AATK	Q6ZMQ8	1374 aa		10.03	□□□□□ -0.8
RPH3A-223	ENST00000552352	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
RPH3A-223	ENST00000552352	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.03	□□□□□ -0.8
RPH3A-223	ENST00000552352	GBP4	Q96PP9	640 aa		10.03	□□□□□ -0.8
RPH3A-223	ENST00000552352	TPM2	P07951	284 aa		10.03	□□□□□ -0.8
RPH3A-223	ENST00000552352	ZMYND15	Q9H091	742 aa		10.03	□□□□□ -0.8
RPH3A-223	ENST00000552352	NRK	Q7Z2Y5	1582 aa		10.03	□□□□□ -0.8
RPH3A-223	ENST00000552352	ITSN1	Q15811	1721 aa		10.02	□□□□□ -0.8
RPH3A-223	ENST00000552352	RIMS1	Q86UR5	1692 aa	Known RBP	10.02	□□□□□ -0.8
RPH3A-223	ENST00000552352	TNPO1	Q92973	898 aa	Known RBP	10.02	□□□□□ -0.8
RPH3A-223	ENST00000552352	PPIP5K1	Q6PFW1	1433 aa		10.02	□□□□□ -0.81
RPH3A-223	ENST00000552352	RAB3GAP1	Q15042	981 aa		10.02	□□□□□ -0.81
RPH3A-223	ENST00000552352	DDX19B	Q9UMR2	479 aa		10.02	□□□□□ -0.81
RPH3A-223	ENST00000552352	XRN1	Q8IZH2	1706 aa	Known RBP	10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	CABP1	Q9NZU7	370 aa		10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	PIK3R4	Q99570	1358 aa		10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	ZNF142	P52746	1687 aa	Predicted RBP	10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	WAPL	Q7Z5K2	1190 aa		10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	GAS2L3	Q86XJ1	694 aa		10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	TBX22	Q9Y458	520 aa		10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	ROBO2	Q9HCK4	1378 aa		10.01	□□□□□ -0.81
RPH3A-223	ENST00000552352	ATXN8OS	P0DMR3	200 aa		10	□□□□□ -0.81
RPH3A-223	ENST00000552352	TRIM27	P14373	513 aa		10	□□□□□ -0.81
RPH3A-223	ENST00000552352	TNNT2	P45379	298 aa	Predicted RBP	10	□□□□□ -0.81
RPH3A-223	ENST00000552352	SMC4	Q9NTJ3	1288 aa		10	□□□□□ -0.81
RPH3A-223	ENST00000552352	TAOK2	Q9UL54	1235 aa		10	□□□□□ -0.81
RPH3A-223	ENST00000552352	CCDC61	Q9Y6R9	512 aa		10	□□□□□ -0.81
RPH3A-223	ENST00000552352	IL16	Q14005	1332 aa		9.99	□□□□□ -0.81
RPH3A-223	ENST00000552352	HSP90AB1	P08238	724 aa	Known RBP	9.99	□□□□□ -0.81
RPH3A-223	ENST00000552352	CCDC173	Q0VFZ6	552 aa		9.99	□□□□□ -0.81
RPH3A-223	ENST00000552352	ITPRIP	Q8IWB1	547 aa		9.99	□□□□□ -0.81
RPH3A-223	ENST00000552352	PLEKHF1	Q96S99	279 aa		9.99	□□□□□ -0.81
RPH3A-223	ENST00000552352	EID1	Q9Y6B2	187 aa		9.99	□□□□□ -0.81
RPH3A-223	ENST00000552352	LRRC7	Q96NW7	1537 aa		9.99	□□□□□ -0.81
RPH3A-223	ENST00000552352	GGNBP2	Q9H3C7	697 aa		9.99	□□□□□ -0.81
RPH3A-223	ENST00000552352	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	9.99	□□□□□ -0.81
RPH3A-223	ENST00000552352	PTPRU	Q92729	1446 aa		9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	LTK	P29376	864 aa		9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	NUCB1	Q02818	461 aa		9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	ATF7IP	Q6VMQ6	1270 aa		9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	NUDT16	Q96DE0	195 aa	Known RBP	9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	PPP1R9B	Q96SB3	815 aa		9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	IBTK	Q9P2D0	1353 aa	Predicted RBP	9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	NALCN	Q8IZF0	1738 aa		9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	PLEKHG3	A1L390	1219 aa		9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	THEMIS	Q8N1K5	641 aa	Predicted RBP	9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352		U3KPZ7	1027 aa	Predicted RBP	9.98	□□□□□ -0.81
RPH3A-223	ENST00000552352	TXNDC2	Q86VQ3	553 aa		9.97	□□□□□ -0.81
RPH3A-223	ENST00000552352	TSR2	Q969E8	191 aa	Known RBP	9.97	□□□□□ -0.81
RPH3A-223	ENST00000552352	PDCL3	Q9H2J4	239 aa		9.97	□□□□□ -0.81
RPH3A-223	ENST00000552352	ZBTB40	Q9NUA8	1239 aa		9.97	□□□□□ -0.81
RPH3A-223	ENST00000552352	SSH1	Q8WYL5	1049 aa		9.97	□□□□□ -0.81
RPH3A-223	ENST00000552352	ANKAR	Q7Z5J8	1434 aa		9.97	□□□□□ -0.81
RPH3A-223	ENST00000552352	ADAMTSL3	P82987	1691 aa		9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	USP54	Q70EL1	1684 aa		9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	DIAPH1	O60610	1272 aa	Known RBP	9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	U2AF1L5	P0DN76	240 aa	Predicted RBP	9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	U2AF1	Q01081	240 aa	Known RBP eCLIP	9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	EXOSC9	Q06265	439 aa	Known RBP	9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	BMP2KL	Q5H9B9	411 aa		9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	CLEC17A	Q6ZS10	378 aa		9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	ZSCAN30	Q86W11	494 aa		9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	KIF2C	Q99661	725 aa		9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	SSH2	Q76I76	1423 aa		9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352	KIF16B	Q96L93	1317 aa		9.96	□□□□□ -0.81
RPH3A-223	ENST00000552352		K7ELQ4	463 aa	Predicted RBP	9.96	□□□□□ -0.82
RPH3A-223	ENST00000552352	FCHSD2	O94868	740 aa		9.96	□□□□□ -0.82
RPH3A-223	ENST00000552352	NASP	P49321	788 aa	Predicted RBP	9.96	□□□□□ -0.82
RPH3A-223	ENST00000552352	NOB1	Q9ULX3	412 aa	Known RBP	9.96	□□□□□ -0.82
RPH3A-223	ENST00000552352	PRR36	Q9H6K5	1346 aa		9.96	□□□□□ -0.82

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