RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 CFAP74Q9C0B2 1584 aa12.2□□□□□ -0.46
BEST3-211ENST00000552295 CROCC2H7BZ55 1655 aa12.19□□□□□ -0.46
BEST3-211ENST00000552295 MMP16P51512 607 aa12.19□□□□□ -0.46
BEST3-211ENST00000552295 ABCC1P33527 1531 aa12.19□□□□□ -0.46
BEST3-211ENST00000552295 FANCAO15360 1455 aa12.19□□□□□ -0.46
BEST3-211ENST00000552295 TSPOAP1O95153 1857 aa12.19□□□□□ -0.46
BEST3-211ENST00000552295 ARHGEF5Q12774 1597 aa12.18□□□□□ -0.46
BEST3-211ENST00000552295 MINK1Q8N4C8 1332 aaPredicted RBP12.18□□□□□ -0.46
BEST3-211ENST00000552295 SYCP2Q9BX26 1530 aa12.18□□□□□ -0.46
BEST3-211ENST00000552295 TTC24A2A3L6 582 aaPredicted RBP12.18□□□□□ -0.46
BEST3-211ENST00000552295 USP46P62068 366 aa12.18□□□□□ -0.46
BEST3-211ENST00000552295 FAM69CQ0P6D2 419 aa12.18□□□□□ -0.46
BEST3-211ENST00000552295 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
BEST3-211ENST00000552295 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
BEST3-211ENST00000552295 PLEKHH2Q8IVE3 1493 aa12.17□□□□□ -0.46
BEST3-211ENST00000552295 AXIN1O15169 862 aa12.17□□□□□ -0.46
BEST3-211ENST00000552295 EFCAB2Q5VUJ9 269 aa12.17□□□□□ -0.46
BEST3-211ENST00000552295 MBD5Q9P267 1494 aa12.16□□□□□ -0.46
BEST3-211ENST00000552295 WNT7AO00755 349 aa12.16□□□□□ -0.46
BEST3-211ENST00000552295 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
BEST3-211ENST00000552295 TRIM32Q13049 653 aa12.16□□□□□ -0.46
BEST3-211ENST00000552295 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
BEST3-211ENST00000552295 DAPK1P53355 1430 aa12.16□□□□□ -0.46
BEST3-211ENST00000552295 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
BEST3-211ENST00000552295 ARHGEF12Q9NZN5 1544 aa12.16□□□□□ -0.46
BEST3-211ENST00000552295 PTPRKQ15262 1439 aa12.15□□□□□ -0.46
BEST3-211ENST00000552295 DXOO77932 396 aaKnown RBP12.15□□□□□ -0.46
BEST3-211ENST00000552295 NEO1Q92859 1461 aa12.14□□□□□ -0.47
BEST3-211ENST00000552295 ABCC5O15440 1437 aa12.14□□□□□ -0.47
BEST3-211ENST00000552295 DACH1Q9UI36 760 aa12.14□□□□□ -0.47
BEST3-211ENST00000552295 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
BEST3-211ENST00000552295 AKNAQ7Z591 1439 aa12.13□□□□□ -0.47
BEST3-211ENST00000552295 ITGAEP38570 1179 aa12.13□□□□□ -0.47
BEST3-211ENST00000552295 SMCPP49901 116 aaPredicted RBP12.13□□□□□ -0.47
BEST3-211ENST00000552295 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
BEST3-211ENST00000552295 SNIP1Q8TAD8 396 aaKnown RBP12.13□□□□□ -0.47
BEST3-211ENST00000552295 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
BEST3-211ENST00000552295 ADGRL1O94910 1474 aa12.13□□□□□ -0.47
BEST3-211ENST00000552295 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
BEST3-211ENST00000552295 HOXA2O43364 376 aa12.12□□□□□ -0.47
BEST3-211ENST00000552295 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
BEST3-211ENST00000552295 HLA-CQ95604 372 aa12.12□□□□□ -0.47
BEST3-211ENST00000552295 TEX14Q8IWB6 1497 aa12.12□□□□□ -0.47
BEST3-211ENST00000552295 SHANK2Q9UPX8 1470 aa12.12□□□□□ -0.47
BEST3-211ENST00000552295 MAST1Q9Y2H9 1570 aa12.11□□□□□ -0.47
BEST3-211ENST00000552295 CCDC24Q8N4L8 307 aa12.11□□□□□ -0.47
BEST3-211ENST00000552295 SCAPERQ9BY12 1400 aa12.11□□□□□ -0.47
BEST3-211ENST00000552295 TRAPPC8Q9Y2L5 1435 aa12.11□□□□□ -0.47
BEST3-211ENST00000552295 CLCN1P35523 988 aa12.1□□□□□ -0.47
BEST3-211ENST00000552295 GPCPD1Q9NPB8 672 aa12.1□□□□□ -0.47
BEST3-211ENST00000552295 GMPR2Q9P2T1 348 aaKnown RBP12.1□□□□□ -0.47
BEST3-211ENST00000552295 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
BEST3-211ENST00000552295 ADGRL2O95490 1459 aa12.09□□□□□ -0.47
BEST3-211ENST00000552295 RICTORQ6R327 1708 aa12.09□□□□□ -0.47
BEST3-211ENST00000552295 SMPD1P17405 629 aa12.09□□□□□ -0.47
BEST3-211ENST00000552295 TREML4Q6UXN2 200 aa12.09□□□□□ -0.47
BEST3-211ENST00000552295 MRGPRX2Q96LB1 330 aa12.09□□□□□ -0.47
BEST3-211ENST00000552295 C9orf84Q5VXU9 1444 aa12.09□□□□□ -0.47
BEST3-211ENST00000552295 C11orf95C9JLR9 678 aaPredicted RBP12.08□□□□□ -0.48
BEST3-211ENST00000552295 REPIN1Q9BWE0 567 aaKnown RBP12.08□□□□□ -0.48
BEST3-211ENST00000552295 POGZQ7Z3K3 1410 aa12.08□□□□□ -0.48
BEST3-211ENST00000552295 KDM5CP41229 1560 aa12.08□□□□□ -0.48
BEST3-211ENST00000552295 INO80Q9ULG1 1556 aaPredicted RBP12.08□□□□□ -0.48
BEST3-211ENST00000552295 ROCK1Q13464 1354 aa12.07□□□□□ -0.48
BEST3-211ENST00000552295 PLXNC1O60486 1568 aa12.07□□□□□ -0.48
BEST3-211ENST00000552295 FRMPD1Q5SYB0 1578 aa12.07□□□□□ -0.48
BEST3-211ENST00000552295 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
BEST3-211ENST00000552295 FAM217BQ9NTX9 383 aaPredicted RBP12.07□□□□□ -0.48
BEST3-211ENST00000552295 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
BEST3-211ENST00000552295 HFM1A2PYH4 1435 aa12.06□□□□□ -0.48
BEST3-211ENST00000552295 GUCA2AQ02747 115 aa12.06□□□□□ -0.48
BEST3-211ENST00000552295 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
BEST3-211ENST00000552295 CHIC2Q9UKJ5 165 aa12.06□□□□□ -0.48
BEST3-211ENST00000552295 DENND4BO75064 1496 aaPredicted RBP12.06□□□□□ -0.48
BEST3-211ENST00000552295 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
BEST3-211ENST00000552295 NAIPQ13075 1403 aa12.05□□□□□ -0.48
BEST3-211ENST00000552295 NCOA1Q15788 1441 aa12.05□□□□□ -0.48
BEST3-211ENST00000552295 JUNDP17535 347 aa12.05□□□□□ -0.48
BEST3-211ENST00000552295 ATP7AQ04656 1500 aa12.05□□□□□ -0.48
BEST3-211ENST00000552295 KIDINS220Q9ULH0 1771 aa12.05□□□□□ -0.48
BEST3-211ENST00000552295 TSPY4P0CV99 314 aa12.04□□□□□ -0.48
BEST3-211ENST00000552295 TSPY10P0CW01 314 aa12.04□□□□□ -0.48
BEST3-211ENST00000552295 WNT7BP56706 349 aa12.04□□□□□ -0.48
BEST3-211ENST00000552295 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
BEST3-211ENST00000552295 HECW2Q9P2P5 1572 aa12.04□□□□□ -0.48
BEST3-211ENST00000552295 ANKRD30AQ9BXX3 1397 aa12.04□□□□□ -0.48
BEST3-211ENST00000552295 RTEL1-TNFRSF6BF6WH68 1400 aa12.03□□□□□ -0.48
BEST3-211ENST00000552295 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
BEST3-211ENST00000552295 J3QL48 77 aa12.03□□□□□ -0.48
BEST3-211ENST00000552295 RC3H1Q5TC82 1133 aaKnown RBP12.03□□□□□ -0.48
BEST3-211ENST00000552295 KDM6BO15054 1643 aa12.03□□□□□ -0.48
BEST3-211ENST00000552295 ZMYM4Q5VZL5 1548 aa12.02□□□□□ -0.48
BEST3-211ENST00000552295 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.49
BEST3-211ENST00000552295 RRP7BPQ9NSQ0 103 aa12.02□□□□□ -0.49
BEST3-211ENST00000552295 SPAG9O60271 1321 aaKnown RBP12.02□□□□□ -0.49
BEST3-211ENST00000552295 MLH3Q9UHC1 1453 aa12.02□□□□□ -0.49
BEST3-211ENST00000552295 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
BEST3-211ENST00000552295 SKOR1P84550 965 aa12.01□□□□□ -0.49
BEST3-211ENST00000552295 LCE2AQ5TA79 106 aaPredicted RBP12.01□□□□□ -0.49
BEST3-211ENST00000552295 RETREG3Q86VR2 466 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms