RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 MAP3K19Q56UN5 1328 aa25.66■■□□□ 1.7
MTA1-220ENST00000552286 PLIN1O60240 522 aa25.66■■□□□ 1.7
MTA1-220ENST00000552286 U2SURPO15042 1029 aaKnown RBP25.65■■□□□ 1.7
MTA1-220ENST00000552286 TNS3Q68CZ2 1445 aa25.65■■□□□ 1.7
MTA1-220ENST00000552286 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
MTA1-220ENST00000552286 NFAT5O94916 1531 aa25.64■■□□□ 1.7
MTA1-220ENST00000552286 LTN1O94822 1766 aa25.64■■□□□ 1.7
MTA1-220ENST00000552286 NCBP3Q53F19 620 aaKnown RBP25.64■■□□□ 1.69
MTA1-220ENST00000552286 SLIT3O75094 1523 aa25.63■■□□□ 1.69
MTA1-220ENST00000552286 NHSL1Q5SYE7 1610 aa25.63■■□□□ 1.69
MTA1-220ENST00000552286 PLEKHG5O94827 1062 aa25.63■■□□□ 1.69
MTA1-220ENST00000552286 RRP7AQ9Y3A4 280 aaKnown RBP25.63■■□□□ 1.69
MTA1-220ENST00000552286 NEUROD2Q15784 382 aa25.62■■□□□ 1.69
MTA1-220ENST00000552286 CCDC27Q2M243 656 aa25.62■■□□□ 1.69
MTA1-220ENST00000552286 FLT4P35916 1363 aa25.61■■□□□ 1.69
MTA1-220ENST00000552286 KCNH5Q8NCM2 988 aa25.61■■□□□ 1.69
MTA1-220ENST00000552286 USP19O94966 1318 aa25.6■■□□□ 1.69
MTA1-220ENST00000552286 ROBO1Q9Y6N7 1651 aa25.6■■□□□ 1.69
MTA1-220ENST00000552286 AMPHP49418 695 aa25.59■■□□□ 1.69
MTA1-220ENST00000552286 SPATA31A3Q5VYP0 1347 aa25.59■■□□□ 1.69
MTA1-220ENST00000552286 MED1Q15648 1581 aaPredicted RBP25.59■■□□□ 1.69
MTA1-220ENST00000552286 IL13P35225 146 aa25.59■■□□□ 1.69
MTA1-220ENST00000552286 HSP90AB2PQ58FF8 381 aa25.59■■□□□ 1.69
MTA1-220ENST00000552286 SOS2Q07890 1332 aaPredicted RBP25.58■■□□□ 1.69
MTA1-220ENST00000552286 WDR63Q8IWG1 891 aa25.58■■□□□ 1.69
MTA1-220ENST00000552286 PLEKHF1Q96S99 279 aa25.57■■□□□ 1.68
MTA1-220ENST00000552286 PHRF1Q9P1Y6 1649 aaKnown RBP25.57■■□□□ 1.68
MTA1-220ENST00000552286 ARHGEF10O15013 1369 aa25.57■■□□□ 1.68
MTA1-220ENST00000552286 KIF24Q5T7B8 1368 aa25.57■■□□□ 1.68
MTA1-220ENST00000552286 GCP02774 474 aa25.57■■□□□ 1.68
MTA1-220ENST00000552286 EIF4A2Q14240 407 aaKnown RBP25.55■■□□□ 1.68
MTA1-220ENST00000552286 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.55■■□□□ 1.68
MTA1-220ENST00000552286 CRBNQ96SW2 442 aa25.55■■□□□ 1.68
MTA1-220ENST00000552286 RBM19Q9Y4C8 960 aaKnown RBP25.55■■□□□ 1.68
MTA1-220ENST00000552286 RTL1A6NKG5 1358 aa25.54■■□□□ 1.68
MTA1-220ENST00000552286 HOXC9P31274 260 aa25.54■■□□□ 1.68
MTA1-220ENST00000552286 C20orf194Q5TEA3 1177 aa25.54■■□□□ 1.68
MTA1-220ENST00000552286 CRYBG1Q9Y4K1 1723 aa25.54■■□□□ 1.68
MTA1-220ENST00000552286 ZBTB7CA1YPR0 619 aa25.53■■□□□ 1.68
MTA1-220ENST00000552286 RGPD1P0DJD0 1748 aa25.51■■□□□ 1.67
MTA1-220ENST00000552286 HMOX1P09601 288 aa25.51■■□□□ 1.67
MTA1-220ENST00000552286 PNNQ9H307 717 aaKnown RBP25.5■■□□□ 1.67
MTA1-220ENST00000552286 MAPK8IP3Q9UPT6 1336 aa25.49■■□□□ 1.67
MTA1-220ENST00000552286 CABLES1Q8TDN4 633 aa25.49■■□□□ 1.67
MTA1-220ENST00000552286 AHDC1Q5TGY3 1603 aaPredicted RBP25.49■■□□□ 1.67
MTA1-220ENST00000552286 FCHSD2O94868 740 aa25.49■■□□□ 1.67
MTA1-220ENST00000552286 TMPOP42166 694 aaKnown RBP25.49■■□□□ 1.67
MTA1-220ENST00000552286 ARHGEF25Q86VW2 580 aa25.49■■□□□ 1.67
MTA1-220ENST00000552286 RSPH6AQ9H0K4 717 aa25.49■■□□□ 1.67
MTA1-220ENST00000552286 BCAR3O75815 825 aa25.47■■□□□ 1.67
MTA1-220ENST00000552286 IP6K1Q92551 441 aa25.47■■□□□ 1.67
MTA1-220ENST00000552286 TOM1O60784 492 aa25.47■■□□□ 1.67
MTA1-220ENST00000552286 PRKAR2BP31323 418 aa25.46■■□□□ 1.67
MTA1-220ENST00000552286 ZC3H6P61129 1189 aaKnown RBP25.46■■□□□ 1.67
MTA1-220ENST00000552286 ABCA3Q99758 1704 aa25.45■■□□□ 1.66
MTA1-220ENST00000552286 MYH16Q9H6N6 1097 aa25.45■■□□□ 1.66
MTA1-220ENST00000552286 LTV1Q96GA3 475 aaPredicted RBP25.44■■□□□ 1.66
MTA1-220ENST00000552286 SULT6B1Q6IMI4 303 aa25.43■■□□□ 1.66
MTA1-220ENST00000552286 TRIM35Q9UPQ4 493 aa25.43■■□□□ 1.66
MTA1-220ENST00000552286 AEBP1Q8IUX7 1158 aa25.43■■□□□ 1.66
MTA1-220ENST00000552286 PIP4K2BP78356 416 aa25.42■■□□□ 1.66
MTA1-220ENST00000552286 RGPD5Q99666 1765 aa25.42■■□□□ 1.66
MTA1-220ENST00000552286 NEFMP07197 916 aa25.41■■□□□ 1.66
MTA1-220ENST00000552286 PHLPP1O60346 1717 aa25.41■■□□□ 1.66
MTA1-220ENST00000552286 UBAP1LF5GYI3 381 aa25.41■■□□□ 1.66
MTA1-220ENST00000552286 IGSF1Q8N6C5 1336 aa25.4■■□□□ 1.66
MTA1-220ENST00000552286 EYA1Q99502 592 aa25.4■■□□□ 1.66
MTA1-220ENST00000552286 RIPK4P57078 832 aa25.39■■□□□ 1.66
MTA1-220ENST00000552286 RARSP54136 660 aaKnown RBP25.39■■□□□ 1.65
MTA1-220ENST00000552286 LRRC59Q96AG4 307 aaKnown RBP25.39■■□□□ 1.65
MTA1-220ENST00000552286 HAP1P54257 671 aaPredicted RBP25.38■■□□□ 1.65
MTA1-220ENST00000552286 PHACTR3Q96KR7 559 aa25.38■■□□□ 1.65
MTA1-220ENST00000552286 KIAA0232Q92628 1395 aa25.38■■□□□ 1.65
MTA1-220ENST00000552286 IL16Q14005 1332 aa25.37■■□□□ 1.65
MTA1-220ENST00000552286 RGPD2P0DJD1 1756 aa25.37■■□□□ 1.65
MTA1-220ENST00000552286 COL18A1P39060 1754 aa25.37■■□□□ 1.65
MTA1-220ENST00000552286 CPDO75976 1380 aa25.37■■□□□ 1.65
MTA1-220ENST00000552286 KDRP35968 1356 aa25.37■■□□□ 1.65
MTA1-220ENST00000552286 AXIN2Q9Y2T1 843 aa25.37■■□□□ 1.65
MTA1-220ENST00000552286 COL16A1Q07092 1604 aaPredicted RBP25.37■■□□□ 1.65
MTA1-220ENST00000552286 ABCC6O95255 1503 aa25.36■■□□□ 1.65
MTA1-220ENST00000552286 PDE3AQ14432 1141 aa25.35■■□□□ 1.65
MTA1-220ENST00000552286 CERKQ8TCT0 537 aa25.35■■□□□ 1.65
MTA1-220ENST00000552286 FANCIQ9NVI1 1328 aa25.35■■□□□ 1.65
MTA1-220ENST00000552286 CHRNA2Q15822 529 aa25.34■■□□□ 1.65
MTA1-220ENST00000552286 ANKRD24Q8TF21 1146 aa25.34■■□□□ 1.65
MTA1-220ENST00000552286 COL22A1Q8NFW1 1626 aaPredicted RBP25.33■■□□□ 1.65
MTA1-220ENST00000552286 CT47B1P0C2W7 299 aaPredicted RBP25.33■■□□□ 1.65
MTA1-220ENST00000552286 NFE2L2Q16236 605 aa25.32■■□□□ 1.64
MTA1-220ENST00000552286 DLG5Q8TDM6 1919 aa25.32■■□□□ 1.64
MTA1-220ENST00000552286 USHBP1Q8N6Y0 703 aa25.31■■□□□ 1.64
MTA1-220ENST00000552286 TSR2Q969E8 191 aaKnown RBP25.31■■□□□ 1.64
MTA1-220ENST00000552286 ERBB3P21860 1342 aa25.31■■□□□ 1.64
MTA1-220ENST00000552286 CANXP27824 592 aaKnown RBP25.31■■□□□ 1.64
MTA1-220ENST00000552286 NBPF6Q5VWK0 638 aa25.31■■□□□ 1.64
MTA1-220ENST00000552286 NBPF4Q96M43 638 aa25.31■■□□□ 1.64
MTA1-220ENST00000552286 PRDM11Q9NQV5 511 aa25.31■■□□□ 1.64
MTA1-220ENST00000552286 KDM2BQ8NHM5 1336 aa25.29■■□□□ 1.64
MTA1-220ENST00000552286 CAMTA1Q9Y6Y1 1673 aa25.29■■□□□ 1.64
MTA1-220ENST00000552286 FRAT1Q92837 279 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms