RNA–Protein interactions for RNA: ENST00000552259.5

CPNE8-209, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-209ENST00000552259 DZIP3Q86Y13 1208 aaKnown RBP7.33□□□□□ -1.24
CPNE8-209ENST00000552259 SEPT12Q8IYM1 358 aa7.33□□□□□ -1.24
CPNE8-209ENST00000552259 EPS8L1Q8TE68 723 aa7.33□□□□□ -1.24
CPNE8-209ENST00000552259 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
CPNE8-209ENST00000552259 UPP2O95045 317 aa7.32□□□□□ -1.24
CPNE8-209ENST00000552259 TIMP2P16035 220 aa7.32□□□□□ -1.24
CPNE8-209ENST00000552259 MTMR14Q8NCE2 650 aa7.32□□□□□ -1.24
CPNE8-209ENST00000552259 KCTD15Q96SI1 283 aaPredicted RBP7.32□□□□□ -1.24
CPNE8-209ENST00000552259 ZIC2O95409 532 aaPredicted RBP7.31□□□□□ -1.24
CPNE8-209ENST00000552259 NR1H3Q13133 447 aa7.31□□□□□ -1.24
CPNE8-209ENST00000552259 TMEM132AQ24JP5 1023 aa7.31□□□□□ -1.24
CPNE8-209ENST00000552259 TRIM47Q96LD4 638 aa7.31□□□□□ -1.24
CPNE8-209ENST00000552259 KLF16Q9BXK1 252 aaPredicted RBP7.3□□□□□ -1.24
CPNE8-209ENST00000552259 GMPR2Q9P2T1 348 aaKnown RBP7.3□□□□□ -1.24
CPNE8-209ENST00000552259 NR3C2P08235 984 aa7.29□□□□□ -1.24
CPNE8-209ENST00000552259 RNF20Q5VTR2 975 aa7.29□□□□□ -1.24
CPNE8-209ENST00000552259 MRPL14Q6P1L8 145 aaKnown RBP7.28□□□□□ -1.24
CPNE8-209ENST00000552259 ITPKCQ96DU7 683 aa7.28□□□□□ -1.24
CPNE8-209ENST00000552259 OCSTAMPQ9BR26 566 aa7.28□□□□□ -1.24
CPNE8-209ENST00000552259 SNRKQ9NRH2 765 aa7.28□□□□□ -1.24
CPNE8-209ENST00000552259 DACH1Q9UI36 760 aa7.28□□□□□ -1.24
CPNE8-209ENST00000552259 FBXO45P0C2W1 286 aa7.27□□□□□ -1.25
CPNE8-209ENST00000552259 FLIIQ13045 1269 aa7.27□□□□□ -1.25
CPNE8-209ENST00000552259 INTS6LQ5JSJ4 861 aaKnown RBP7.27□□□□□ -1.25
CPNE8-209ENST00000552259 PPP1R26Q5T8A7 1209 aaPredicted RBP7.27□□□□□ -1.25
CPNE8-209ENST00000552259 WWC1Q8IX03 1113 aa7.27□□□□□ -1.25
CPNE8-209ENST00000552259 MEIOBQ8N635 442 aa7.27□□□□□ -1.25
CPNE8-209ENST00000552259 TSEN34Q9BSV6 310 aaKnown RBP7.27□□□□□ -1.25
CPNE8-209ENST00000552259 PCDHB9Q9Y5E1 797 aa7.27□□□□□ -1.25
CPNE8-209ENST00000552259 ESPNB1AK53 854 aa7.26□□□□□ -1.25
CPNE8-209ENST00000552259 WASHC4Q2M389 1173 aa7.26□□□□□ -1.25
CPNE8-209ENST00000552259 BMP1P13497 986 aa7.25□□□□□ -1.25
CPNE8-209ENST00000552259 EIF4G2P78344 907 aaKnown RBP eCLIP7.25□□□□□ -1.25
CPNE8-209ENST00000552259 TRIM46Q7Z4K8 759 aa7.25□□□□□ -1.25
CPNE8-209ENST00000552259 ZFAND3Q9H8U3 227 aa7.25□□□□□ -1.25
CPNE8-209ENST00000552259 MCM6Q14566 821 aa7.24□□□□□ -1.25
CPNE8-209ENST00000552259 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
CPNE8-209ENST00000552259 POTECB2RU33 542 aa7.23□□□□□ -1.25
CPNE8-209ENST00000552259 SOX11P35716 441 aa7.23□□□□□ -1.25
CPNE8-209ENST00000552259 Q6ZVU0 165 aa7.23□□□□□ -1.25
CPNE8-209ENST00000552259 ZNF775Q96BV0 537 aaPredicted RBP7.23□□□□□ -1.25
CPNE8-209ENST00000552259 ZFP42Q96MM3 310 aa7.23□□□□□ -1.25
CPNE8-209ENST00000552259 TBC1D2BQ9UPU7 963 aa7.23□□□□□ -1.25
CPNE8-209ENST00000552259 RAD21O60216 631 aa7.22□□□□□ -1.25
CPNE8-209ENST00000552259 BMP2P12643 396 aa7.22□□□□□ -1.25
CPNE8-209ENST00000552259 NPAS3Q8IXF0 933 aa7.22□□□□□ -1.25
CPNE8-209ENST00000552259 PURBQ96QR8 312 aaKnown RBP7.22□□□□□ -1.25
CPNE8-209ENST00000552259 GPR37L1O60883 481 aa7.21□□□□□ -1.26
CPNE8-209ENST00000552259 ERVH48-1M5A8F1 160 aa7.2□□□□□ -1.26
CPNE8-209ENST00000552259 SNRPBP14678 240 aaKnown RBP7.2□□□□□ -1.26
CPNE8-209ENST00000552259 ESF1Q9H501 851 aaKnown RBP7.2□□□□□ -1.26
CPNE8-209ENST00000552259 MAN1A2O60476 641 aa7.19□□□□□ -1.26
CPNE8-209ENST00000552259 RAB15P59190 212 aa7.19□□□□□ -1.26
CPNE8-209ENST00000552259 C6orf118Q5T5N4 469 aa7.19□□□□□ -1.26
CPNE8-209ENST00000552259 ZNF784Q8NCA9 323 aaPredicted RBP7.19□□□□□ -1.26
CPNE8-209ENST00000552259 SLC16A10Q8TF71 515 aa7.19□□□□□ -1.26
CPNE8-209ENST00000552259 SPINT1O43278 529 aa7.18□□□□□ -1.26
CPNE8-209ENST00000552259 GIGYF1O75420 1035 aaPredicted RBP7.18□□□□□ -1.26
CPNE8-209ENST00000552259 ADH1AP07327 375 aa7.18□□□□□ -1.26
CPNE8-209ENST00000552259 ABL2P42684 1182 aa7.18□□□□□ -1.26
CPNE8-209ENST00000552259 GDPD2Q9HCC8 539 aa7.18□□□□□ -1.26
CPNE8-209ENST00000552259 UBTFP17480 764 aaKnown RBP7.17□□□□□ -1.26
CPNE8-209ENST00000552259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.17□□□□□ -1.26
CPNE8-209ENST00000552259 CC2D2BQ6DHV5 1058 aa7.17□□□□□ -1.26
CPNE8-209ENST00000552259 NXF1Q9UBU9 619 aaKnown RBP7.17□□□□□ -1.26
CPNE8-209ENST00000552259 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 TTLL8A6PVC2 850 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 MYCP01106 439 aaPredicted RBP7.16□□□□□ -1.26
CPNE8-209ENST00000552259 ERVK-9P63128 1117 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 CBLBQ13191 982 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 IRF5Q13568 498 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 SLFNL1Q499Z3 407 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 TREML4Q6UXN2 200 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 CYP2U1Q7Z449 544 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 SIRT1Q96EB6 747 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 KRTAP4-6Q9BYQ5 205 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 CEP126Q9P2H0 1117 aa7.16□□□□□ -1.26
CPNE8-209ENST00000552259 SOS2Q07890 1332 aaPredicted RBP7.16□□□□□ -1.26
CPNE8-209ENST00000552259 TERTO14746 1132 aaKnown RBP7.15□□□□□ -1.26
CPNE8-209ENST00000552259 LILRA1O75019 489 aa7.15□□□□□ -1.26
CPNE8-209ENST00000552259 WFS1O76024 890 aa7.15□□□□□ -1.26
CPNE8-209ENST00000552259 SEMA3FQ13275 785 aa7.15□□□□□ -1.26
CPNE8-209ENST00000552259 COG6Q9Y2V7 657 aa7.15□□□□□ -1.26
CPNE8-209ENST00000552259 PCDHB11Q9Y5F2 797 aa7.15□□□□□ -1.26
CPNE8-209ENST00000552259 ATP5J2-PTCD1G3V325 749 aa7.14□□□□□ -1.27
CPNE8-209ENST00000552259 PTGIRP43119 386 aa7.14□□□□□ -1.27
CPNE8-209ENST00000552259 RELBQ01201 579 aa7.14□□□□□ -1.27
CPNE8-209ENST00000552259 CYLDQ9NQC7 956 aa7.14□□□□□ -1.27
CPNE8-209ENST00000552259 GPC1P35052 558 aa7.13□□□□□ -1.27
CPNE8-209ENST00000552259 VAC14Q08AM6 782 aa7.13□□□□□ -1.27
CPNE8-209ENST00000552259 MAP7D1Q3KQU3 841 aa7.13□□□□□ -1.27
CPNE8-209ENST00000552259 RNF135Q8IUD6 432 aa7.13□□□□□ -1.27
CPNE8-209ENST00000552259 POLMQ9NP87 494 aaPredicted RBP7.13□□□□□ -1.27
CPNE8-209ENST00000552259 USP4Q13107 963 aa7.12□□□□□ -1.27
CPNE8-209ENST00000552259 IRF7Q92985 503 aa7.12□□□□□ -1.27
CPNE8-209ENST00000552259 NFX1Q12986 1120 aaKnown RBP7.11□□□□□ -1.27
CPNE8-209ENST00000552259 DOLKQ9UPQ8 538 aa7.11□□□□□ -1.27
CPNE8-209ENST00000552259 H3BM21 787 aa7.1□□□□□ -1.27
CPNE8-209ENST00000552259 LZTS3O60299 673 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms