RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 IP6K1Q92551 441 aa18.72■□□□□ 0.59
LETMD1-229ENST00000551261 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
LETMD1-229ENST00000551261 CPDO75976 1380 aa18.71■□□□□ 0.59
LETMD1-229ENST00000551261 KDRP35968 1356 aa18.71■□□□□ 0.59
LETMD1-229ENST00000551261 XPCQ01831 940 aaPredicted RBP18.71■□□□□ 0.59
LETMD1-229ENST00000551261 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
LETMD1-229ENST00000551261 RSPH6AQ9H0K4 717 aa18.71■□□□□ 0.59
LETMD1-229ENST00000551261 PLEKHG2Q9H7P9 1386 aa18.7■□□□□ 0.58
LETMD1-229ENST00000551261 FAM208AQ9UK61 1670 aaKnown RBP18.7■□□□□ 0.58
LETMD1-229ENST00000551261 FBLN1P23142 703 aa18.7■□□□□ 0.58
LETMD1-229ENST00000551261 NUTM2GQ5VZR2 741 aa18.7■□□□□ 0.58
LETMD1-229ENST00000551261 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
LETMD1-229ENST00000551261 ARHGEF25Q86VW2 580 aa18.7■□□□□ 0.58
LETMD1-229ENST00000551261 TCP11L2Q8N4U5 519 aa18.7■□□□□ 0.58
LETMD1-229ENST00000551261 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
LETMD1-229ENST00000551261 IGSF1Q8N6C5 1336 aa18.7■□□□□ 0.58
LETMD1-229ENST00000551261 SOX12O15370 315 aa18.69■□□□□ 0.58
LETMD1-229ENST00000551261 GOLGA2Q08379 1002 aa18.69■□□□□ 0.58
LETMD1-229ENST00000551261 HSP90AB2PQ58FF8 381 aa18.69■□□□□ 0.58
LETMD1-229ENST00000551261 CAMTA1Q9Y6Y1 1673 aa18.69■□□□□ 0.58
LETMD1-229ENST00000551261 TOM1O60784 492 aa18.68■□□□□ 0.58
LETMD1-229ENST00000551261 LMOD3Q0VAK6 560 aa18.68■□□□□ 0.58
LETMD1-229ENST00000551261 ABCA3Q99758 1704 aa18.68■□□□□ 0.58
LETMD1-229ENST00000551261 COL22A1Q8NFW1 1626 aaPredicted RBP18.67■□□□□ 0.58
LETMD1-229ENST00000551261 PRKAR2BP31323 418 aa18.67■□□□□ 0.58
LETMD1-229ENST00000551261 WDR63Q8IWG1 891 aa18.67■□□□□ 0.58
LETMD1-229ENST00000551261 E9PSI1 815 aa18.66■□□□□ 0.58
LETMD1-229ENST00000551261 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
LETMD1-229ENST00000551261 CALD1Q05682 793 aaKnown RBP18.65■□□□□ 0.58
LETMD1-229ENST00000551261 TMPOP42166 694 aaKnown RBP18.64■□□□□ 0.57
LETMD1-229ENST00000551261 WWC1Q8IX03 1113 aa18.64■□□□□ 0.57
LETMD1-229ENST00000551261 LRRC59Q96AG4 307 aaKnown RBP18.64■□□□□ 0.57
LETMD1-229ENST00000551261 IL16Q14005 1332 aa18.64■□□□□ 0.57
LETMD1-229ENST00000551261 NFE2L2Q16236 605 aa18.63■□□□□ 0.57
LETMD1-229ENST00000551261 SULT6B1Q6IMI4 303 aa18.62■□□□□ 0.57
LETMD1-229ENST00000551261 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
LETMD1-229ENST00000551261 COL18A1P39060 1754 aa18.61■□□□□ 0.57
LETMD1-229ENST00000551261 LMO7Q8WWI1 1683 aa18.61■□□□□ 0.57
LETMD1-229ENST00000551261 PHLPP1O60346 1717 aa18.6■□□□□ 0.57
LETMD1-229ENST00000551261 COL16A1Q07092 1604 aaPredicted RBP18.6■□□□□ 0.57
LETMD1-229ENST00000551261 HMOX1P09601 288 aa18.6■□□□□ 0.57
LETMD1-229ENST00000551261 EYA1Q99502 592 aa18.6■□□□□ 0.57
LETMD1-229ENST00000551261 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
LETMD1-229ENST00000551261 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
LETMD1-229ENST00000551261 NEFLP07196 543 aa18.59■□□□□ 0.57
LETMD1-229ENST00000551261 SLFN5Q08AF3 891 aa18.59■□□□□ 0.57
LETMD1-229ENST00000551261 TRMT2AQ8IZ69 625 aaKnown RBP18.59■□□□□ 0.57
LETMD1-229ENST00000551261 ERBB3P21860 1342 aa18.58■□□□□ 0.57
LETMD1-229ENST00000551261 RIPK4P57078 832 aa18.58■□□□□ 0.56
LETMD1-229ENST00000551261 GAS2L2Q8NHY3 880 aa18.58■□□□□ 0.56
LETMD1-229ENST00000551261 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
LETMD1-229ENST00000551261 HAP1P54257 671 aaPredicted RBP18.56■□□□□ 0.56
LETMD1-229ENST00000551261 DUSP27Q5VZP5 1158 aa18.56■□□□□ 0.56
LETMD1-229ENST00000551261 ANKRD24Q8TF21 1146 aa18.56■□□□□ 0.56
LETMD1-229ENST00000551261 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
LETMD1-229ENST00000551261 CT47B1P0C2W7 299 aaPredicted RBP18.55■□□□□ 0.56
LETMD1-229ENST00000551261 ZC3H6P61129 1189 aaKnown RBP18.54■□□□□ 0.56
LETMD1-229ENST00000551261 NEUROD2Q15784 382 aa18.54■□□□□ 0.56
LETMD1-229ENST00000551261 AEBP1Q8IUX7 1158 aa18.54■□□□□ 0.56
LETMD1-229ENST00000551261 TRIM35Q9UPQ4 493 aa18.54■□□□□ 0.56
LETMD1-229ENST00000551261 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
LETMD1-229ENST00000551261 COL14A1Q05707 1796 aaKnown RBP18.54■□□□□ 0.56
LETMD1-229ENST00000551261 DLG5Q8TDM6 1919 aa18.53■□□□□ 0.56
LETMD1-229ENST00000551261 CDCA7LQ96GN5 454 aa18.53■□□□□ 0.56
LETMD1-229ENST00000551261 PHACTR3Q96KR7 559 aa18.53■□□□□ 0.56
LETMD1-229ENST00000551261 PRDM11Q9NQV5 511 aa18.53■□□□□ 0.56
LETMD1-229ENST00000551261 RNF123Q5XPI4 1314 aa18.52■□□□□ 0.56
LETMD1-229ENST00000551261 ZBTB7CA1YPR0 619 aa18.52■□□□□ 0.56
LETMD1-229ENST00000551261 AMOTQ4VCS5 1084 aa18.52■□□□□ 0.56
LETMD1-229ENST00000551261 ERICH6BQ5W0A0 696 aa18.52■□□□□ 0.56
LETMD1-229ENST00000551261 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.56
LETMD1-229ENST00000551261 RGPD5Q99666 1765 aa18.51■□□□□ 0.55
LETMD1-229ENST00000551261 UBAP1LF5GYI3 381 aa18.51■□□□□ 0.55
LETMD1-229ENST00000551261 OVOS2A0A0G2JMS6 1433 aa18.5■□□□□ 0.55
LETMD1-229ENST00000551261 LRRC37A3O60309 1634 aa18.5■□□□□ 0.55
LETMD1-229ENST00000551261 CERKQ8TCT0 537 aa18.5■□□□□ 0.55
LETMD1-229ENST00000551261 CABLES1Q8TDN4 633 aa18.5■□□□□ 0.55
LETMD1-229ENST00000551261 LTV1Q96GA3 475 aaPredicted RBP18.5■□□□□ 0.55
LETMD1-229ENST00000551261 IFT57Q9NWB7 429 aa18.5■□□□□ 0.55
LETMD1-229ENST00000551261 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
LETMD1-229ENST00000551261 COL5A2P05997 1499 aaPredicted RBP18.5■□□□□ 0.55
LETMD1-229ENST00000551261 SENP3-EIF4A1A0A087X0R7 540 aa18.49■□□□□ 0.55
LETMD1-229ENST00000551261 GNAI1P63096 354 aa18.49■□□□□ 0.55
LETMD1-229ENST00000551261 NBPF6Q5VWK0 638 aa18.49■□□□□ 0.55
LETMD1-229ENST00000551261 NBPF4Q96M43 638 aa18.49■□□□□ 0.55
LETMD1-229ENST00000551261 AXIN2Q9Y2T1 843 aa18.49■□□□□ 0.55
LETMD1-229ENST00000551261 WDR17Q8IZU2 1322 aa18.49■□□□□ 0.55
LETMD1-229ENST00000551261 MAP3K5Q99683 1374 aa18.48■□□□□ 0.55
LETMD1-229ENST00000551261 RTF1Q92541 710 aaKnown RBP18.48■□□□□ 0.55
LETMD1-229ENST00000551261 PARP4Q9UKK3 1724 aaKnown RBP18.47■□□□□ 0.55
LETMD1-229ENST00000551261 ZNF428Q96B54 188 aa18.47■□□□□ 0.55
LETMD1-229ENST00000551261 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.47■□□□□ 0.55
LETMD1-229ENST00000551261 SUPT16HQ9Y5B9 1047 aaKnown RBP18.47■□□□□ 0.55
LETMD1-229ENST00000551261 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
LETMD1-229ENST00000551261 CSB-PGBD3P0DP91 1061 aa18.46■□□□□ 0.55
LETMD1-229ENST00000551261 PLEKHO1Q53GL0 409 aaPredicted RBP18.46■□□□□ 0.55
LETMD1-229ENST00000551261 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.46■□□□□ 0.55
LETMD1-229ENST00000551261 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
LETMD1-229ENST00000551261 MTHFSDQ2M296 383 aaKnown RBP18.45■□□□□ 0.54
LETMD1-229ENST00000551261 RAPGEF4Q8WZA2 1011 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms