RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	CCDC144A	A2RUR9	1427 aa		9.34	□□□□□ -0.91
RACGAP1-223	ENST00000551260	NAIP	Q13075	1403 aa		9.34	□□□□□ -0.91
RACGAP1-223	ENST00000551260	ANKRD50	Q9ULJ7	1429 aa		9.34	□□□□□ -0.91
RACGAP1-223	ENST00000551260	RGL2	O15211	777 aa		9.34	□□□□□ -0.91
RACGAP1-223	ENST00000551260	C7	P10643	843 aa		9.34	□□□□□ -0.91
RACGAP1-223	ENST00000551260	PTGER2	P43116	358 aa		9.34	□□□□□ -0.91
RACGAP1-223	ENST00000551260	FAM196A	Q6ZSG2	479 aa		9.34	□□□□□ -0.91
RACGAP1-223	ENST00000551260	SYT17	Q9BSW7	474 aa		9.34	□□□□□ -0.91
RACGAP1-223	ENST00000551260	DLC1	Q96QB1	1528 aa		9.34	□□□□□ -0.91
RACGAP1-223	ENST00000551260	TRPM3	Q9HCF6	1732 aa	Predicted RBP	9.34	□□□□□ -0.92
RACGAP1-223	ENST00000551260	HFM1	A2PYH4	1435 aa		9.33	□□□□□ -0.92
RACGAP1-223	ENST00000551260	PPL	O60437	1756 aa		9.33	□□□□□ -0.92
RACGAP1-223	ENST00000551260	POTEF	A5A3E0	1075 aa		9.33	□□□□□ -0.92
RACGAP1-223	ENST00000551260	LMOD2	Q6P5Q4	547 aa		9.33	□□□□□ -0.92
RACGAP1-223	ENST00000551260	ANO8	Q9HCE9	1232 aa	Predicted RBP	9.33	□□□□□ -0.92
RACGAP1-223	ENST00000551260	ALS2	Q96Q42	1657 aa		9.32	□□□□□ -0.92
RACGAP1-223	ENST00000551260	POTEB2	H3BUK9	544 aa		9.31	□□□□□ -0.92
RACGAP1-223	ENST00000551260	PRAG1	Q86YV5	1406 aa		9.31	□□□□□ -0.92
RACGAP1-223	ENST00000551260	VGF	O15240	615 aa	Predicted RBP	9.3	□□□□□ -0.92
RACGAP1-223	ENST00000551260	IER5L	Q5T953	404 aa		9.3	□□□□□ -0.92
RACGAP1-223	ENST00000551260	COLQ	Q9Y215	455 aa	Predicted RBP	9.3	□□□□□ -0.92
RACGAP1-223	ENST00000551260	PEAK1	Q9H792	1746 aa		9.3	□□□□□ -0.92
RACGAP1-223	ENST00000551260	GOLGB1	Q14789	3259 aa	Known RBP	9.3	□□□□□ -0.92
RACGAP1-223	ENST00000551260	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	9.29	□□□□□ -0.92
RACGAP1-223	ENST00000551260	LHX8	Q68G74	356 aa		9.29	□□□□□ -0.92
RACGAP1-223	ENST00000551260	ZFP91	Q96JP5	570 aa	Predicted RBP	9.29	□□□□□ -0.92
RACGAP1-223	ENST00000551260	KNDC1	Q76NI1	1749 aa		9.28	□□□□□ -0.92
RACGAP1-223	ENST00000551260	WAPL	Q7Z5K2	1190 aa		9.28	□□□□□ -0.92
RACGAP1-223	ENST00000551260	TECPR2	O15040	1411 aa		9.28	□□□□□ -0.92
RACGAP1-223	ENST00000551260	SPATA31A1	Q5TZJ5	1347 aa		9.28	□□□□□ -0.92
RACGAP1-223	ENST00000551260	PARP4	Q9UKK3	1724 aa	Known RBP	9.28	□□□□□ -0.92
RACGAP1-223	ENST00000551260	PLEKHH1	Q9ULM0	1364 aa		9.27	□□□□□ -0.93
RACGAP1-223	ENST00000551260	SLC34A2	O95436	690 aa		9.27	□□□□□ -0.93
RACGAP1-223	ENST00000551260	HSPA6	P17066	643 aa		9.27	□□□□□ -0.93
RACGAP1-223	ENST00000551260	IRX5	P78411	483 aa	Predicted RBP	9.27	□□□□□ -0.93
RACGAP1-223	ENST00000551260	GPR162	Q16538	588 aa		9.27	□□□□□ -0.93
RACGAP1-223	ENST00000551260	RRBP1	Q9P2E9	1410 aa	Known RBP	9.27	□□□□□ -0.93
RACGAP1-223	ENST00000551260	SBNO1	A3KN83	1393 aa		9.26	□□□□□ -0.93
RACGAP1-223	ENST00000551260	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.26	□□□□□ -0.93
RACGAP1-223	ENST00000551260	CABP2	Q9NPB3	220 aa		9.26	□□□□□ -0.93
RACGAP1-223	ENST00000551260	USP35	Q9P2H5	1018 aa		9.26	□□□□□ -0.93
RACGAP1-223	ENST00000551260	AKAP12	Q02952	1782 aa		9.26	□□□□□ -0.93
RACGAP1-223	ENST00000551260	PHRF1	Q9P1Y6	1649 aa	Known RBP	9.26	□□□□□ -0.93
RACGAP1-223	ENST00000551260	ARHGEF10	O15013	1369 aa		9.25	□□□□□ -0.93
RACGAP1-223	ENST00000551260	POTEJ	P0CG39	1038 aa		9.25	□□□□□ -0.93
RACGAP1-223	ENST00000551260	PSME1	Q06323	249 aa		9.25	□□□□□ -0.93
RACGAP1-223	ENST00000551260	PTF1A	Q7RTS3	328 aa		9.25	□□□□□ -0.93
RACGAP1-223	ENST00000551260	PHF8	Q9UPP1	1060 aa		9.25	□□□□□ -0.93
RACGAP1-223	ENST00000551260	NRXN1	Q9ULB1	1477 aa		9.25	□□□□□ -0.93
RACGAP1-223	ENST00000551260	KAT6B	Q8WYB5	2073 aa		9.24	□□□□□ -0.93
RACGAP1-223	ENST00000551260	PDE3B	Q13370	1112 aa		9.24	□□□□□ -0.93
RACGAP1-223	ENST00000551260	STRN4	Q9NRL3	753 aa		9.24	□□□□□ -0.93
RACGAP1-223	ENST00000551260	STK26	Q9P289	416 aa		9.24	□□□□□ -0.93
RACGAP1-223	ENST00000551260	WNK3	Q9BYP7	1800 aa		9.24	□□□□□ -0.93
RACGAP1-223	ENST00000551260	VPS8	Q8N3P4	1428 aa		9.23	□□□□□ -0.93
RACGAP1-223	ENST00000551260	COL24A1	Q17RW2	1714 aa		9.23	□□□□□ -0.93
RACGAP1-223	ENST00000551260	SEC24B	O95487	1268 aa		9.23	□□□□□ -0.93
RACGAP1-223	ENST00000551260	CHRNA2	Q15822	529 aa		9.23	□□□□□ -0.93
RACGAP1-223	ENST00000551260	BCL11B	Q9C0K0	894 aa	Predicted RBP	9.23	□□□□□ -0.93
RACGAP1-223	ENST00000551260	TUBGCP6	Q96RT7	1819 aa		9.23	□□□□□ -0.93
RACGAP1-223	ENST00000551260	TOPAZ1	Q8N9V7	1692 aa		9.23	□□□□□ -0.93
RACGAP1-223	ENST00000551260	ATP10D	Q9P241	1426 aa		9.22	□□□□□ -0.93
RACGAP1-223	ENST00000551260	WDR90	Q96KV7	1748 aa		9.22	□□□□□ -0.93
RACGAP1-223	ENST00000551260	GOLGA2	Q08379	1002 aa		9.22	□□□□□ -0.93
RACGAP1-223	ENST00000551260	MKRN3	Q13064	507 aa	Known RBP	9.22	□□□□□ -0.93
RACGAP1-223	ENST00000551260	ARX	Q96QS3	562 aa		9.22	□□□□□ -0.93
RACGAP1-223	ENST00000551260	TAOK2	Q9UL54	1235 aa		9.22	□□□□□ -0.93
RACGAP1-223	ENST00000551260	LRRC37A3	O60309	1634 aa		9.22	□□□□□ -0.93
RACGAP1-223	ENST00000551260	NUP155	O75694	1391 aa		9.22	□□□□□ -0.93
RACGAP1-223	ENST00000551260	PRELP	P51888	382 aa		9.21	□□□□□ -0.94
RACGAP1-223	ENST00000551260	EFCAB3	Q8N7B9	438 aa		9.21	□□□□□ -0.94
RACGAP1-223	ENST00000551260	PMFBP1	Q8TBY8	1022 aa		9.21	□□□□□ -0.94
RACGAP1-223	ENST00000551260	OCEL1	Q9H607	264 aa		9.21	□□□□□ -0.94
RACGAP1-223	ENST00000551260	PRDM11	Q9NQV5	511 aa		9.21	□□□□□ -0.94
RACGAP1-223	ENST00000551260	PLSCR1	O15162	318 aa		9.2	□□□□□ -0.94
RACGAP1-223	ENST00000551260	PDCD7	Q8N8D1	485 aa	Known RBP	9.2	□□□□□ -0.94
RACGAP1-223	ENST00000551260	ZNF526	Q8TF50	670 aa	Predicted RBP	9.2	□□□□□ -0.94
RACGAP1-223	ENST00000551260	MTFR1L	Q9H019	292 aa		9.2	□□□□□ -0.94
RACGAP1-223	ENST00000551260	RTN4	Q9NQC3	1192 aa	Known RBP	9.2	□□□□□ -0.94
RACGAP1-223	ENST00000551260	MAP3K5	Q99683	1374 aa		9.2	□□□□□ -0.94
RACGAP1-223	ENST00000551260	STK25	O00506	426 aa		9.19	□□□□□ -0.94
RACGAP1-223	ENST00000551260	PLCG2	P16885	1265 aa		9.19	□□□□□ -0.94
RACGAP1-223	ENST00000551260	FAM50A	Q14320	339 aa	Known RBP	9.19	□□□□□ -0.94
RACGAP1-223	ENST00000551260	AMER1	Q5JTC6	1135 aa	Predicted RBP	9.19	□□□□□ -0.94
RACGAP1-223	ENST00000551260	DNAJC5G	Q8N7S2	189 aa		9.19	□□□□□ -0.94
RACGAP1-223	ENST00000551260	KIAA0232	Q92628	1395 aa		9.19	□□□□□ -0.94
RACGAP1-223	ENST00000551260	PAPPA	Q13219	1627 aa		9.18	□□□□□ -0.94
RACGAP1-223	ENST00000551260	SLC15A2	Q16348	729 aa		9.18	□□□□□ -0.94
RACGAP1-223	ENST00000551260	QSER1	Q2KHR3	1735 aa		9.18	□□□□□ -0.94
RACGAP1-223	ENST00000551260	BARGIN	Q6ZT62	677 aa		9.18	□□□□□ -0.94
RACGAP1-223	ENST00000551260	SSH2	Q76I76	1423 aa		9.18	□□□□□ -0.94
RACGAP1-223	ENST00000551260	TNS4	Q8IZW8	715 aa		9.18	□□□□□ -0.94
RACGAP1-223	ENST00000551260	LMO7	Q8WWI1	1683 aa		9.18	□□□□□ -0.94
RACGAP1-223	ENST00000551260	STK32B	Q9NY57	414 aa		9.18	□□□□□ -0.94
RACGAP1-223	ENST00000551260	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	9.18	□□□□□ -0.94	9e-7	■■□□□ 14.2
RACGAP1-223	ENST00000551260	STK24	Q9Y6E0	443 aa		9.18	□□□□□ -0.94
RACGAP1-223	ENST00000551260	YBX3	P16989	372 aa	Known RBP eCLIP	9.17	□□□□□ -0.94
RACGAP1-223	ENST00000551260	TMEM132E	Q6IEE7	984 aa		9.17	□□□□□ -0.94
RACGAP1-223	ENST00000551260	LARP1	Q6PKG0	1096 aa	Known RBP	9.17	□□□□□ -0.94
RACGAP1-223	ENST00000551260	NLGN2	Q8NFZ4	835 aa		9.17	□□□□□ -0.94

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