RNA–Protein interactions for RNA: ENST00000551085.5

ERBB3-217, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 4,382 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-217ENST00000551085 ALDH1L2Q3SY69 923 aa13.81□□□□□ -0.2
ERBB3-217ENST00000551085 PAXBP1Q9Y5B6 917 aa13.8□□□□□ -0.2
ERBB3-217ENST00000551085 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
ERBB3-217ENST00000551085 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
ERBB3-217ENST00000551085 NPC1L1Q9UHC9 1359 aa13.8□□□□□ -0.2
ERBB3-217ENST00000551085 IRX3P78415 501 aaPredicted RBP13.8□□□□□ -0.2
ERBB3-217ENST00000551085 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
ERBB3-217ENST00000551085 CCDC141Q6ZP82 1450 aa13.79□□□□□ -0.2
ERBB3-217ENST00000551085 KDM4AO75164 1064 aa13.79□□□□□ -0.2
ERBB3-217ENST00000551085 TTC22Q5TAA0 569 aa13.79□□□□□ -0.2
ERBB3-217ENST00000551085 CLEC17AQ6ZS10 378 aa13.79□□□□□ -0.2
ERBB3-217ENST00000551085 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
ERBB3-217ENST00000551085 RTF1Q92541 710 aaKnown RBP13.79□□□□□ -0.2
ERBB3-217ENST00000551085 DDIT3P35638 169 aa13.79□□□□□ -0.2
ERBB3-217ENST00000551085 GNAI1P63096 354 aa13.79□□□□□ -0.2
ERBB3-217ENST00000551085 FKBP5Q13451 457 aaPredicted RBP13.79□□□□□ -0.2
ERBB3-217ENST00000551085 HOMER1Q86YM7 354 aa13.79□□□□□ -0.2
ERBB3-217ENST00000551085 ABCC2Q92887 1545 aa13.79□□□□□ -0.2
ERBB3-217ENST00000551085 GTF2E1P29083 439 aaPredicted RBP13.78□□□□□ -0.2
ERBB3-217ENST00000551085 NOL10Q9BSC4 688 aaKnown RBP13.78□□□□□ -0.2
ERBB3-217ENST00000551085 USP26Q9BXU7 913 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 NUP160Q12769 1436 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 MX1P20591 662 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 LMOD3Q0VAK6 560 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 NOM1Q5C9Z4 860 aaKnown RBP13.78□□□□□ -0.2
ERBB3-217ENST00000551085 BICD2Q8TD16 824 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 IQGAP2Q13576 1575 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 SCAF11Q99590 1463 aaKnown RBP13.78□□□□□ -0.2
ERBB3-217ENST00000551085 GPATCH8Q9UKJ3 1502 aaKnown RBP13.78□□□□□ -0.2
ERBB3-217ENST00000551085 MAGI2Q86UL8 1455 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 ABCC11Q96J66 1382 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 SMTNL1A8MU46 457 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 GTF2F1P35269 517 aaKnown RBP eCLIP13.78□□□□□ -0.23e-8■■■□□ 17.7
ERBB3-217ENST00000551085 GIMAP6Q6P9H5 292 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 MNS1Q8NEH6 495 aa13.78□□□□□ -0.2
ERBB3-217ENST00000551085 UPF3BQ9BZI7 483 aaKnown RBP13.78□□□□□ -0.2
ERBB3-217ENST00000551085 TPM4P67936 248 aa13.77□□□□□ -0.2
ERBB3-217ENST00000551085 PTPN14Q15678 1187 aa13.77□□□□□ -0.2
ERBB3-217ENST00000551085 SAMD9Q5K651 1589 aa13.77□□□□□ -0.2
ERBB3-217ENST00000551085 TRIM34Q9BYJ4 488 aa13.77□□□□□ -0.2
ERBB3-217ENST00000551085 GNL2Q13823 731 aaKnown RBP13.77□□□□□ -0.21
ERBB3-217ENST00000551085 CHAMP1Q96JM3 812 aa13.77□□□□□ -0.21
ERBB3-217ENST00000551085 UBE2HP62256 183 aa13.77□□□□□ -0.21
ERBB3-217ENST00000551085 APPP05067 770 aa13.76□□□□□ -0.21
ERBB3-217ENST00000551085 TERF2IPQ9NYB0 399 aa13.76□□□□□ -0.21
ERBB3-217ENST00000551085 HDGFL2Q7Z4V5 671 aaPredicted RBP13.76□□□□□ -0.21
ERBB3-217ENST00000551085 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.76□□□□□ -0.21
ERBB3-217ENST00000551085 OS9Q13438 667 aaPredicted RBP13.76□□□□□ -0.21
ERBB3-217ENST00000551085 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
ERBB3-217ENST00000551085 NUP62CLQ9H1M0 184 aa13.76□□□□□ -0.21
ERBB3-217ENST00000551085 GGNBP2Q9H3C7 697 aa13.76□□□□□ -0.21
ERBB3-217ENST00000551085 EVC2Q86UK5 1308 aa13.76□□□□□ -0.21
ERBB3-217ENST00000551085 NCOA3Q9Y6Q9 1424 aa13.76□□□□□ -0.21
ERBB3-217ENST00000551085 MAP3K11Q16584 847 aa13.76□□□□□ -0.21
ERBB3-217ENST00000551085 TNMDQ9H2S6 317 aa13.76□□□□□ -0.21
ERBB3-217ENST00000551085 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-217ENST00000551085 CCDC186Q7Z3E2 898 aa13.75□□□□□ -0.21
ERBB3-217ENST00000551085 ZNF397Q8NF99 534 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-217ENST00000551085 SDSP20132 328 aa13.75□□□□□ -0.21
ERBB3-217ENST00000551085 CEP135Q66GS9 1140 aa13.75□□□□□ -0.21
ERBB3-217ENST00000551085 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERBB3-217ENST00000551085 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
ERBB3-217ENST00000551085 PTGS1P23219 599 aa13.74□□□□□ -0.21
ERBB3-217ENST00000551085 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
ERBB3-217ENST00000551085 CARD14Q9BXL6 1004 aa13.74□□□□□ -0.21
ERBB3-217ENST00000551085 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
ERBB3-217ENST00000551085 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
ERBB3-217ENST00000551085 KIF18AQ8NI77 898 aa13.74□□□□□ -0.21
ERBB3-217ENST00000551085 A2MP01023 1474 aa13.74□□□□□ -0.21
ERBB3-217ENST00000551085 GORABQ5T7V8 394 aa13.74□□□□□ -0.21
ERBB3-217ENST00000551085 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.73□□□□□ -0.21
ERBB3-217ENST00000551085 V9GYY5 206 aaPredicted RBP13.73□□□□□ -0.21
ERBB3-217ENST00000551085 PLEKHM2Q8IWE5 1019 aa13.73□□□□□ -0.21
ERBB3-217ENST00000551085 RPAP2Q8IXW5 612 aaPredicted RBP13.73□□□□□ -0.21
ERBB3-217ENST00000551085 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
ERBB3-217ENST00000551085 CAMK4Q16566 473 aa13.73□□□□□ -0.21
ERBB3-217ENST00000551085 PAXIP1Q6ZW49 1069 aaPredicted RBP13.73□□□□□ -0.21
ERBB3-217ENST00000551085 AK7Q96M32 723 aa13.73□□□□□ -0.21
ERBB3-217ENST00000551085 CLIP2Q9UDT6 1046 aa13.73□□□□□ -0.21
ERBB3-217ENST00000551085 NSFL1CQ9UNZ2 370 aaKnown RBP13.73□□□□□ -0.21
ERBB3-217ENST00000551085 CNPY2Q9Y2B0 182 aa13.73□□□□□ -0.21
ERBB3-217ENST00000551085 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
ERBB3-217ENST00000551085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.72□□□□□ -0.21
ERBB3-217ENST00000551085 STK26Q9P289 416 aa13.72□□□□□ -0.21
ERBB3-217ENST00000551085 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
ERBB3-217ENST00000551085 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
ERBB3-217ENST00000551085 KRT85P78386 507 aa13.72□□□□□ -0.21
ERBB3-217ENST00000551085 FILIP1Q7Z7B0 1213 aa13.72□□□□□ -0.21
ERBB3-217ENST00000551085 CCAR2Q8N163 923 aaKnown RBP13.72□□□□□ -0.21
ERBB3-217ENST00000551085 ZNF710Q8N1W2 664 aa13.72□□□□□ -0.21
ERBB3-217ENST00000551085 KIF2CQ99661 725 aa13.72□□□□□ -0.21
ERBB3-217ENST00000551085 POLR3GO15318 223 aaPredicted RBP13.72□□□□□ -0.21
ERBB3-217ENST00000551085 GADD45BO75293 160 aaPredicted RBP13.72□□□□□ -0.21
ERBB3-217ENST00000551085 TMCO3Q6UWJ1 677 aa13.72□□□□□ -0.21
ERBB3-217ENST00000551085 IL16Q14005 1332 aa13.72□□□□□ -0.21
ERBB3-217ENST00000551085 FAM135AQ9P2D6 1515 aa13.71□□□□□ -0.21
ERBB3-217ENST00000551085 WDR62O43379 1518 aa13.71□□□□□ -0.21
ERBB3-217ENST00000551085 KIF3BO15066 747 aa13.71□□□□□ -0.21
ERBB3-217ENST00000551085 BRD1O95696 1058 aa13.71□□□□□ -0.21
ERBB3-217ENST00000551085 EFCAB2Q5VUJ9 269 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms