RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 LCE2DQ5TA82 110 aaPredicted RBP12.99□□□□□ -0.33
ATP2B1-207ENST00000550716 TRPC5Q9UL62 973 aaPredicted RBP12.99□□□□□ -0.33
ATP2B1-207ENST00000550716 FMN2Q9NZ56 1722 aa12.99□□□□□ -0.33
ATP2B1-207ENST00000550716 NRXN1Q9ULB1 1477 aa12.97□□□□□ -0.33
ATP2B1-207ENST00000550716 ATAD2Q6PL18 1390 aa12.97□□□□□ -0.33
ATP2B1-207ENST00000550716 KIF3CO14782 793 aa12.97□□□□□ -0.33
ATP2B1-207ENST00000550716 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.33
ATP2B1-207ENST00000550716 ST18O60284 1047 aa12.96□□□□□ -0.33
ATP2B1-207ENST00000550716 CFAP70Q5T0N1 1121 aa12.96□□□□□ -0.33
ATP2B1-207ENST00000550716 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.33
ATP2B1-207ENST00000550716 CFAP44Q96MT7 982 aa12.96□□□□□ -0.33
ATP2B1-207ENST00000550716 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
ATP2B1-207ENST00000550716 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
ATP2B1-207ENST00000550716 C14orf93Q9H972 538 aaKnown RBP12.95□□□□□ -0.34
ATP2B1-207ENST00000550716 GLI3P10071 1580 aa12.94□□□□□ -0.34
ATP2B1-207ENST00000550716 SLIT2O94813 1529 aa12.94□□□□□ -0.34
ATP2B1-207ENST00000550716 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
ATP2B1-207ENST00000550716 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
ATP2B1-207ENST00000550716 MARF1Q9Y4F3 1742 aaKnown RBP12.93□□□□□ -0.34
ATP2B1-207ENST00000550716 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
ATP2B1-207ENST00000550716 RALGAPBQ86X10 1494 aa12.93□□□□□ -0.34
ATP2B1-207ENST00000550716 KRT28Q7Z3Y7 464 aa12.93□□□□□ -0.34
ATP2B1-207ENST00000550716 CABLES1Q8TDN4 633 aa12.93□□□□□ -0.34
ATP2B1-207ENST00000550716 USP32Q8NFA0 1604 aa12.92□□□□□ -0.34
ATP2B1-207ENST00000550716 TNS3Q68CZ2 1445 aa12.92□□□□□ -0.34
ATP2B1-207ENST00000550716 GJD4Q96KN9 370 aaPredicted RBP12.92□□□□□ -0.34
ATP2B1-207ENST00000550716 PRAM1Q96QH2 718 aa12.92□□□□□ -0.34
ATP2B1-207ENST00000550716 RAB3GAP2Q9H2M9 1393 aa12.92□□□□□ -0.34
ATP2B1-207ENST00000550716 ADGRB1O14514 1584 aa12.91□□□□□ -0.34
ATP2B1-207ENST00000550716 SIRT1Q96EB6 747 aa12.91□□□□□ -0.34
ATP2B1-207ENST00000550716 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
ATP2B1-207ENST00000550716 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
ATP2B1-207ENST00000550716 DHX57Q6P158 1386 aaKnown RBP12.9□□□□□ -0.34
ATP2B1-207ENST00000550716 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.9□□□□□ -0.34
ATP2B1-207ENST00000550716 RGPD8O14715 1765 aaPredicted RBP12.89□□□□□ -0.35
ATP2B1-207ENST00000550716 DLC1Q96QB1 1528 aa12.88□□□□□ -0.35
ATP2B1-207ENST00000550716 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
ATP2B1-207ENST00000550716 POTEMA6NI47 508 aa12.88□□□□□ -0.35
ATP2B1-207ENST00000550716 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
ATP2B1-207ENST00000550716 PMFBP1Q8TBY8 1022 aa12.88□□□□□ -0.35
ATP2B1-207ENST00000550716 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
ATP2B1-207ENST00000550716 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
ATP2B1-207ENST00000550716 PRR36Q9H6K5 1346 aa12.88□□□□□ -0.35
ATP2B1-207ENST00000550716 ADGRB2O60241 1585 aa12.87□□□□□ -0.35
ATP2B1-207ENST00000550716 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
ATP2B1-207ENST00000550716 POTEGQ6S5H5 508 aa12.87□□□□□ -0.35
ATP2B1-207ENST00000550716 CRISPLD2Q9H0B8 497 aa12.87□□□□□ -0.35
ATP2B1-207ENST00000550716 LMOD2Q6P5Q4 547 aa12.86□□□□□ -0.35
ATP2B1-207ENST00000550716 TRAK1Q9UPV9 953 aa12.86□□□□□ -0.35
ATP2B1-207ENST00000550716 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
ATP2B1-207ENST00000550716 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
ATP2B1-207ENST00000550716 HAP1P54257 671 aaPredicted RBP12.85□□□□□ -0.35
ATP2B1-207ENST00000550716 DSG2Q14126 1118 aa12.85□□□□□ -0.35
ATP2B1-207ENST00000550716 POGKQ9P215 609 aa12.85□□□□□ -0.35
ATP2B1-207ENST00000550716 MINK1Q8N4C8 1332 aaPredicted RBP12.85□□□□□ -0.35
ATP2B1-207ENST00000550716 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
ATP2B1-207ENST00000550716 FOXK1P85037 733 aa12.84□□□□□ -0.35
ATP2B1-207ENST00000550716 PSME1Q06323 249 aa12.84□□□□□ -0.35
ATP2B1-207ENST00000550716 VPS72Q15906 364 aa12.84□□□□□ -0.35
ATP2B1-207ENST00000550716 DEFB132Q7Z7B7 95 aa12.84□□□□□ -0.35
ATP2B1-207ENST00000550716 SEPT12Q8IYM1 358 aa12.84□□□□□ -0.35
ATP2B1-207ENST00000550716 MARVELD3Q96A59 401 aa12.84□□□□□ -0.35
ATP2B1-207ENST00000550716 TRPM3Q9HCF6 1732 aaPredicted RBP12.84□□□□□ -0.35
ATP2B1-207ENST00000550716 ARHGEF10O15013 1369 aa12.83□□□□□ -0.36
ATP2B1-207ENST00000550716 BLMP54132 1417 aaPredicted RBP12.83□□□□□ -0.36
ATP2B1-207ENST00000550716 KDM2AQ9Y2K7 1162 aa12.83□□□□□ -0.36
ATP2B1-207ENST00000550716 BRWD3Q6RI45 1802 aa12.83□□□□□ -0.36
ATP2B1-207ENST00000550716 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
ATP2B1-207ENST00000550716 ACIN1Q9UKV3 1341 aaKnown RBP12.82□□□□□ -0.36
ATP2B1-207ENST00000550716 TULP4Q9NRJ4 1543 aa12.82□□□□□ -0.36
ATP2B1-207ENST00000550716 NRAPQ86VF7 1730 aa12.82□□□□□ -0.36
ATP2B1-207ENST00000550716 ALS2Q96Q42 1657 aa12.81□□□□□ -0.36
ATP2B1-207ENST00000550716 PDE4AP27815 886 aa12.81□□□□□ -0.36
ATP2B1-207ENST00000550716 CCDC125Q86Z20 511 aa12.81□□□□□ -0.36
ATP2B1-207ENST00000550716 DCAF11Q8TEB1 546 aa12.81□□□□□ -0.36
ATP2B1-207ENST00000550716 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
ATP2B1-207ENST00000550716 NWD2Q9ULI1 1742 aa12.8□□□□□ -0.36
ATP2B1-207ENST00000550716 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
ATP2B1-207ENST00000550716 EMP3P54852 163 aa12.8□□□□□ -0.36
ATP2B1-207ENST00000550716 PPP1R15BQ5SWA1 713 aa12.8□□□□□ -0.36
ATP2B1-207ENST00000550716 ATP7BP35670 1465 aa12.79□□□□□ -0.36
ATP2B1-207ENST00000550716 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
ATP2B1-207ENST00000550716 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
ATP2B1-207ENST00000550716 ZSWIM6Q9HCJ5 1215 aa12.79□□□□□ -0.36
ATP2B1-207ENST00000550716 BTG4Q9NY30 223 aa12.79□□□□□ -0.36
ATP2B1-207ENST00000550716 HOXB1P14653 301 aaPredicted RBP12.78□□□□□ -0.36
ATP2B1-207ENST00000550716 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
ATP2B1-207ENST00000550716 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
ATP2B1-207ENST00000550716 CRYBG1Q9Y4K1 1723 aa12.78□□□□□ -0.36
ATP2B1-207ENST00000550716 FAM182BQ5T319 152 aa12.77□□□□□ -0.37
ATP2B1-207ENST00000550716 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.37
ATP2B1-207ENST00000550716 GPRASP1Q5JY77 1395 aa12.77□□□□□ -0.37
ATP2B1-207ENST00000550716 ARHGEF28Q8N1W1 1705 aaKnown RBP12.76□□□□□ -0.37
ATP2B1-207ENST00000550716 A0A0G2JS52 829 aa12.76□□□□□ -0.37
ATP2B1-207ENST00000550716 MYT1Q01538 1121 aa12.76□□□□□ -0.37
ATP2B1-207ENST00000550716 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
ATP2B1-207ENST00000550716 COL14A1Q05707 1796 aaKnown RBP12.76□□□□□ -0.37
ATP2B1-207ENST00000550716 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
ATP2B1-207ENST00000550716 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
ATP2B1-207ENST00000550716 NGDNQ8NEJ9 315 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms