RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 SAMD7Q7Z3H4 446 aa5.83□□□□□ -1.48
CCDC59-204ENST00000550589 EIF2AK4Q9P2K8 1649 aaKnown RBP5.83□□□□□ -1.48
CCDC59-204ENST00000550589 POLR1AO95602 1720 aaPredicted RBP5.83□□□□□ -1.48
CCDC59-204ENST00000550589 GOLGA8CPA6NN73 597 aa5.83□□□□□ -1.48
CCDC59-204ENST00000550589 NLRP13Q86W25 1043 aa5.83□□□□□ -1.48
CCDC59-204ENST00000550589 BCANQ96GW7 911 aa5.83□□□□□ -1.48
CCDC59-204ENST00000550589 PPP4R2Q9NY27 417 aa5.83□□□□□ -1.48
CCDC59-204ENST00000550589 EIF3AQ14152 1382 aaKnown RBP5.83□□□□□ -1.48
CCDC59-204ENST00000550589 XP32Q5T750 250 aa5.82□□□□□ -1.48
CCDC59-204ENST00000550589 ANKK1Q8NFD2 765 aa5.82□□□□□ -1.48
CCDC59-204ENST00000550589 PXYLP1Q8TE99 480 aa5.82□□□□□ -1.48
CCDC59-204ENST00000550589 DHX29Q7Z478 1369 aaKnown RBP5.82□□□□□ -1.48
CCDC59-204ENST00000550589 MAGI2Q86UL8 1455 aa5.82□□□□□ -1.48
CCDC59-204ENST00000550589 ABCC1P33527 1531 aa5.82□□□□□ -1.48
CCDC59-204ENST00000550589 ZCCHC11Q5TAX3 1644 aaKnown RBP5.82□□□□□ -1.48
CCDC59-204ENST00000550589 IQGAP3Q86VI3 1631 aa5.82□□□□□ -1.48
CCDC59-204ENST00000550589 FANCAO15360 1455 aa5.81□□□□□ -1.48
CCDC59-204ENST00000550589 PDE3BQ13370 1112 aa5.81□□□□□ -1.48
CCDC59-204ENST00000550589 AFAP1Q8N556 730 aa5.81□□□□□ -1.48
CCDC59-204ENST00000550589 PSMG3-AS1Q96PY0 264 aa5.81□□□□□ -1.48
CCDC59-204ENST00000550589 KIF3BO15066 747 aa5.81□□□□□ -1.48
CCDC59-204ENST00000550589 SWT1Q5T5J6 900 aaKnown RBP5.81□□□□□ -1.48
CCDC59-204ENST00000550589 METTL3Q86U44 580 aaKnown RBP5.81□□□□□ -1.48
CCDC59-204ENST00000550589 PNISRQ8TF01 805 aaKnown RBP5.81□□□□□ -1.48
CCDC59-204ENST00000550589 ZC3H15Q8WU90 426 aaKnown RBP5.81□□□□□ -1.48
CCDC59-204ENST00000550589 WBP1LQ9NX94 342 aa5.81□□□□□ -1.48
CCDC59-204ENST00000550589 NUDCQ9Y266 331 aa5.81□□□□□ -1.48
CCDC59-204ENST00000550589 TRAPPC8Q9Y2L5 1435 aa5.8□□□□□ -1.48
CCDC59-204ENST00000550589 RCCD1A6NED2 376 aa5.8□□□□□ -1.48
CCDC59-204ENST00000550589 BTBD11A6QL63 1104 aa5.8□□□□□ -1.48
CCDC59-204ENST00000550589 NLRP7Q8WX94 980 aa5.8□□□□□ -1.48
CCDC59-204ENST00000550589 KNSTRNQ9Y448 316 aa5.8□□□□□ -1.48
CCDC59-204ENST00000550589 ADGRL1O94910 1474 aa5.8□□□□□ -1.48
CCDC59-204ENST00000550589 SCAPERQ9BY12 1400 aa5.8□□□□□ -1.48
CCDC59-204ENST00000550589 INSRP06213 1382 aa5.8□□□□□ -1.48
CCDC59-204ENST00000550589 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.8□□□□□ -1.48
CCDC59-204ENST00000550589 ERCC6L2Q5T890 1561 aa5.79□□□□□ -1.48
CCDC59-204ENST00000550589 PLA2R1Q13018 1463 aa5.79□□□□□ -1.48
CCDC59-204ENST00000550589 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
CCDC59-204ENST00000550589 TULP1O00294 542 aaPredicted RBP5.79□□□□□ -1.48
CCDC59-204ENST00000550589 ZMYND10O75800 440 aa5.79□□□□□ -1.48
CCDC59-204ENST00000550589 CCDC184Q52MB2 194 aa5.79□□□□□ -1.48
CCDC59-204ENST00000550589 RBM46Q8TBY0 533 aaKnown RBP5.79□□□□□ -1.48
CCDC59-204ENST00000550589 LRCH3Q96II8 777 aa5.79□□□□□ -1.48
CCDC59-204ENST00000550589 TMEM134Q9H6X4 195 aa5.79□□□□□ -1.48
CCDC59-204ENST00000550589 A2MP01023 1474 aa5.79□□□□□ -1.48
CCDC59-204ENST00000550589 PTPRTO14522 1441 aa5.79□□□□□ -1.48
CCDC59-204ENST00000550589 SMG6Q86US8 1419 aaKnown RBP5.79□□□□□ -1.48
CCDC59-204ENST00000550589 LAMC1P11047 1609 aa5.79□□□□□ -1.48
CCDC59-204ENST00000550589 IRF6O14896 467 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 CNGB1Q14028 1251 aaPredicted RBP5.78□□□□□ -1.48
CCDC59-204ENST00000550589 NBPF1Q3BBV0 1214 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 HPS5Q9UPZ3 1129 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 ZNF518AQ6AHZ1 1483 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 ASXL2Q76L83 1435 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 OATP04181 439 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 KCNC4Q03721 635 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 MAP2K5Q13163 448 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 TSR3Q9UJK0 312 aaKnown RBP5.78□□□□□ -1.48
CCDC59-204ENST00000550589 NEURL4Q96JN8 1562 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 PARD3Q8TEW0 1356 aa5.78□□□□□ -1.48
CCDC59-204ENST00000550589 TRPM2O94759 1503 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 ATP7AQ04656 1500 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 PER1O15534 1290 aaPredicted RBP5.77□□□□□ -1.49
CCDC59-204ENST00000550589 DNAJB2P25686 324 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 BARGINQ6ZT62 677 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 TESK2Q96S53 571 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 PANK3Q9H999 370 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 V9GY48 417 aaPredicted RBP5.77□□□□□ -1.49
CCDC59-204ENST00000550589 TRPM1Q7Z4N2 1603 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 PRDM15P57071 1507 aaPredicted RBP5.77□□□□□ -1.49
CCDC59-204ENST00000550589 ZFYVE16Q7Z3T8 1539 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 SCAF11Q99590 1463 aaKnown RBP5.77□□□□□ -1.49
CCDC59-204ENST00000550589 COL17A1Q9UMD9 1497 aaPredicted RBP5.77□□□□□ -1.49
CCDC59-204ENST00000550589 ABCA9Q8IUA7 1624 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 PDZRN3Q9UPQ7 1066 aa5.77□□□□□ -1.49
CCDC59-204ENST00000550589 LRPPRCP42704 1394 aaKnown RBP5.76□□□□□ -1.49
CCDC59-204ENST00000550589 ZMYM4Q5VZL5 1548 aa5.76□□□□□ -1.49
CCDC59-204ENST00000550589 RPGRIP1LQ68CZ1 1315 aa5.76□□□□□ -1.49
CCDC59-204ENST00000550589 CD109Q6YHK3 1445 aa5.76□□□□□ -1.49
CCDC59-204ENST00000550589 WDR43Q15061 677 aaKnown RBP eCLIP5.76□□□□□ -1.49
CCDC59-204ENST00000550589 NGEFQ8N5V2 710 aa5.76□□□□□ -1.49
CCDC59-204ENST00000550589 BCORL1Q5H9F3 1711 aa5.76□□□□□ -1.49
CCDC59-204ENST00000550589 MINK1Q8N4C8 1332 aaPredicted RBP5.76□□□□□ -1.49
CCDC59-204ENST00000550589 CFAP74Q9C0B2 1584 aa5.76□□□□□ -1.49
CCDC59-204ENST00000550589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.75□□□□□ -1.49
CCDC59-204ENST00000550589 SLC10A3P09131 477 aa5.75□□□□□ -1.49
CCDC59-204ENST00000550589 CCDC102AQ96A19 550 aa5.75□□□□□ -1.49
CCDC59-204ENST00000550589 APLP1P51693 650 aa5.75□□□□□ -1.49
CCDC59-204ENST00000550589 PPP4CP60510 307 aa5.75□□□□□ -1.49
CCDC59-204ENST00000550589 CC2D1BQ5T0F9 858 aaKnown RBP5.75□□□□□ -1.49
CCDC59-204ENST00000550589 CCDC136Q96JN2 1154 aa5.75□□□□□ -1.49
CCDC59-204ENST00000550589 RBM19Q9Y4C8 960 aaKnown RBP5.75□□□□□ -1.49
CCDC59-204ENST00000550589 TET3O43151 1660 aa5.75□□□□□ -1.49
CCDC59-204ENST00000550589 NPC1L1Q9UHC9 1359 aa5.74□□□□□ -1.49
CCDC59-204ENST00000550589 DEPDC5O75140 1603 aa5.74□□□□□ -1.49
CCDC59-204ENST00000550589 MLH3Q9UHC1 1453 aa5.74□□□□□ -1.49
CCDC59-204ENST00000550589 DISP3Q9P2K9 1392 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms