RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ZDHHC9Q9Y397 364 aa14.75□□□□□ -0.05
VDR-208ENST00000550325 CGNQ9P2M7 1197 aaKnown RBP14.75□□□□□ -0.05
VDR-208ENST00000550325 ZBTB7BO15156 539 aaPredicted RBP14.74□□□□□ -0.05
VDR-208ENST00000550325 U2AF2P26368 475 aaKnown RBP eCLIP14.74□□□□□ -0.05
VDR-208ENST00000550325 ERVK-7P63135 1459 aa14.74□□□□□ -0.05
VDR-208ENST00000550325 ZNF710Q8N1W2 664 aa14.74□□□□□ -0.05
VDR-208ENST00000550325 LAMC1P11047 1609 aa14.74□□□□□ -0.05
VDR-208ENST00000550325 CLEC17AQ6ZS10 378 aa14.74□□□□□ -0.05
VDR-208ENST00000550325 PPIP5K1Q6PFW1 1433 aa14.74□□□□□ -0.05
VDR-208ENST00000550325 ADCY5O95622 1261 aa14.74□□□□□ -0.05
VDR-208ENST00000550325 SRPK2P78362 688 aaKnown RBP14.74□□□□□ -0.05
VDR-208ENST00000550325 AFAP1Q8N556 730 aa14.74□□□□□ -0.05
VDR-208ENST00000550325 HMOX1P09601 288 aa14.73□□□□□ -0.05
VDR-208ENST00000550325 PLEKHM2Q8IWE5 1019 aa14.73□□□□□ -0.05
VDR-208ENST00000550325 CHMP4BQ9H444 224 aaKnown RBP14.73□□□□□ -0.05
VDR-208ENST00000550325 STK26Q9P289 416 aa14.73□□□□□ -0.05
VDR-208ENST00000550325 GADD45BO75293 160 aaPredicted RBP14.73□□□□□ -0.05
VDR-208ENST00000550325 HCLS1P14317 486 aaPredicted RBP14.73□□□□□ -0.05
VDR-208ENST00000550325 SIRT2Q8IXJ6 389 aa14.73□□□□□ -0.05
VDR-208ENST00000550325 TSPYL6Q8N831 410 aa14.73□□□□□ -0.05
VDR-208ENST00000550325 BCL2L12Q9HB09 334 aa14.73□□□□□ -0.05
VDR-208ENST00000550325 KDM5AP29375 1690 aaKnown RBP14.72□□□□□ -0.05
VDR-208ENST00000550325 CDK11BP21127 795 aaKnown RBP14.72□□□□□ -0.05
VDR-208ENST00000550325 SDSP20132 328 aa14.72□□□□□ -0.05
VDR-208ENST00000550325 FBLN1P23142 703 aa14.72□□□□□ -0.05
VDR-208ENST00000550325 TTC22Q5TAA0 569 aa14.72□□□□□ -0.05
VDR-208ENST00000550325 UTP14CQ5TAP6 766 aaKnown RBP14.72□□□□□ -0.05
VDR-208ENST00000550325 PRIMPOLQ96LW4 560 aa14.72□□□□□ -0.05
VDR-208ENST00000550325 VGLL3A8MV65 326 aa14.71□□□□□ -0.05
VDR-208ENST00000550325 DTNBO60941 627 aa14.71□□□□□ -0.05
VDR-208ENST00000550325 PHF14O94880 888 aa14.71□□□□□ -0.05
VDR-208ENST00000550325 REC8O95072 547 aa14.71□□□□□ -0.05
VDR-208ENST00000550325 CYP2E1P05181 493 aaPredicted RBP14.71□□□□□ -0.05
VDR-208ENST00000550325 MLECQ14165 292 aa14.71□□□□□ -0.05
VDR-208ENST00000550325 TSHZ3Q63HK5 1081 aa14.71□□□□□ -0.06
VDR-208ENST00000550325 TMX3Q96JJ7 454 aa14.71□□□□□ -0.06
VDR-208ENST00000550325 SPAG9O60271 1321 aaKnown RBP14.7□□□□□ -0.06
VDR-208ENST00000550325 CHMP3Q9Y3E7 222 aa14.7□□□□□ -0.06
VDR-208ENST00000550325 PRKAR2BP31323 418 aa14.7□□□□□ -0.06
VDR-208ENST00000550325 PIBF1Q8WXW3 757 aa14.7□□□□□ -0.06
VDR-208ENST00000550325 UPF3BQ9BZI7 483 aaKnown RBP14.7□□□□□ -0.06
VDR-208ENST00000550325 DIAPH1O60610 1272 aaKnown RBP14.7□□□□□ -0.06
VDR-208ENST00000550325 PDE4CQ08493 712 aa14.7□□□□□ -0.06
VDR-208ENST00000550325 GTPBP4Q9BZE4 634 aaKnown RBP14.7□□□□□ -0.06
VDR-208ENST00000550325 SAMD9LQ8IVG5 1584 aa14.69□□□□□ -0.06
VDR-208ENST00000550325 ABCC11Q96J66 1382 aa14.69□□□□□ -0.06
VDR-208ENST00000550325 IQSEC2Q5JU85 1478 aa14.69□□□□□ -0.06
VDR-208ENST00000550325 DRC7Q8IY82 874 aa14.68□□□□□ -0.06
VDR-208ENST00000550325 LARP6Q9BRS8 491 aaKnown RBP14.68□□□□□ -0.06
VDR-208ENST00000550325 ANO2Q9NQ90 1003 aa14.68□□□□□ -0.06
VDR-208ENST00000550325 RILPL2Q969X0 211 aa14.68□□□□□ -0.06
VDR-208ENST00000550325 TRIM6-TRIM34B2RNG4 842 aa14.68□□□□□ -0.06
VDR-208ENST00000550325 RIOK3O14730 519 aaKnown RBP14.68□□□□□ -0.06
VDR-208ENST00000550325 ZBTB22O15209 634 aa14.68□□□□□ -0.06
VDR-208ENST00000550325 ALDH1L2Q3SY69 923 aa14.68□□□□□ -0.06
VDR-208ENST00000550325 USP48Q86UV5 1035 aa14.68□□□□□ -0.06
VDR-208ENST00000550325 PTPRTO14522 1441 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 ZNF518AQ6AHZ1 1483 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 MADDQ8WXG6 1647 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 CHD1O14646 1710 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 FIBPO43427 364 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 LETM1O95202 739 aaPredicted RBP14.67□□□□□ -0.06
VDR-208ENST00000550325 KANK1Q14678 1352 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 ERC2O15083 957 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 FAM69CQ0P6D2 419 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 EFCAB2Q5VUJ9 269 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 MYOM1P52179 1685 aa14.67□□□□□ -0.06
VDR-208ENST00000550325 ZNF592Q92610 1267 aa14.66□□□□□ -0.06
VDR-208ENST00000550325 STAC3Q96MF2 364 aa14.66□□□□□ -0.06
VDR-208ENST00000550325 CFAP44Q96MT7 982 aa14.66□□□□□ -0.06
VDR-208ENST00000550325 DIAPH3Q9NSV4 1193 aa14.66□□□□□ -0.06
VDR-208ENST00000550325 ARHGEF5Q12774 1597 aa14.66□□□□□ -0.06
VDR-208ENST00000550325 TWISTNBQ3B726 338 aaPredicted RBP14.66□□□□□ -0.06
VDR-208ENST00000550325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.66□□□□□ -0.06
VDR-208ENST00000550325 MRPL50Q8N5N7 158 aaKnown RBP14.66□□□□□ -0.06
VDR-208ENST00000550325 PLEKHF1Q96S99 279 aa14.66□□□□□ -0.06
VDR-208ENST00000550325 CD109Q6YHK3 1445 aa14.65□□□□□ -0.06
VDR-208ENST00000550325 KIF20AO95235 890 aa14.65□□□□□ -0.06
VDR-208ENST00000550325 IQGAP1P46940 1657 aa14.65□□□□□ -0.06
VDR-208ENST00000550325 RNF17Q9BXT8 1623 aaKnown RBP14.65□□□□□ -0.06
VDR-208ENST00000550325 GIMAP6Q6P9H5 292 aa14.65□□□□□ -0.06
VDR-208ENST00000550325 VAMP4O75379 141 aa14.64□□□□□ -0.07
VDR-208ENST00000550325 SLC4A10Q6U841 1118 aa14.64□□□□□ -0.07
VDR-208ENST00000550325 MCCP23508 829 aa14.64□□□□□ -0.07
VDR-208ENST00000550325 ESF1Q9H501 851 aaKnown RBP14.64□□□□□ -0.07
VDR-208ENST00000550325 EVC2Q86UK5 1308 aa14.64□□□□□ -0.07
VDR-208ENST00000550325 NOS1P29475 1434 aa14.63□□□□□ -0.07
VDR-208ENST00000550325 PYCARDQ9ULZ3 195 aa14.63□□□□□ -0.07
VDR-208ENST00000550325 CNPY2Q9Y2B0 182 aa14.63□□□□□ -0.07
VDR-208ENST00000550325 MAST1Q9Y2H9 1570 aa14.63□□□□□ -0.07
VDR-208ENST00000550325 C16orf45Q96MC5 204 aaPredicted RBP14.63□□□□□ -0.07
VDR-208ENST00000550325 IFT57Q9NWB7 429 aa14.63□□□□□ -0.07
VDR-208ENST00000550325 DCTN1Q14203 1278 aa14.63□□□□□ -0.07
VDR-208ENST00000550325 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
VDR-208ENST00000550325 API5Q9BZZ5 524 aaKnown RBP14.62□□□□□ -0.07
VDR-208ENST00000550325 ERICH4A6NGS2 130 aa14.62□□□□□ -0.07
VDR-208ENST00000550325 CEP152O94986 1710 aa14.62□□□□□ -0.07
VDR-208ENST00000550325 BRD1O95696 1058 aa14.61□□□□□ -0.07
VDR-208ENST00000550325 TTC37Q6PGP7 1564 aa14.61□□□□□ -0.07
VDR-208ENST00000550325 GTF2E1P29083 439 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms