RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 MARCH10Q8NA82 808 aaPredicted RBP16.25■□□□□ 0.19
TROAP-210ENST00000549534 CD2APQ9Y5K6 639 aa16.25■□□□□ 0.19
TROAP-210ENST00000549534 CRB1P82279 1406 aa16.25■□□□□ 0.19
TROAP-210ENST00000549534 BRD4O60885 1362 aaPredicted RBP16.25■□□□□ 0.19
TROAP-210ENST00000549534 KIF1BO60333 1816 aa16.24■□□□□ 0.19
TROAP-210ENST00000549534 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
TROAP-210ENST00000549534 CDCA7Q9BWT1 371 aaPredicted RBP16.24■□□□□ 0.19
TROAP-210ENST00000549534 CPDO75976 1380 aa16.24■□□□□ 0.19
TROAP-210ENST00000549534 MLLT1Q03111 559 aaPredicted RBP16.23■□□□□ 0.19
TROAP-210ENST00000549534 AKT1S1Q96B36 256 aa16.23■□□□□ 0.19
TROAP-210ENST00000549534 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
TROAP-210ENST00000549534 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
TROAP-210ENST00000549534 PNPLA7Q6ZV29 1317 aa16.2■□□□□ 0.18
TROAP-210ENST00000549534 YTHDC2Q9H6S0 1430 aaKnown RBP16.2■□□□□ 0.18
TROAP-210ENST00000549534 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
TROAP-210ENST00000549534 LMO7Q8WWI1 1683 aa16.2■□□□□ 0.18
TROAP-210ENST00000549534 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
TROAP-210ENST00000549534 COL5A2P05997 1499 aaPredicted RBP16.19■□□□□ 0.18
TROAP-210ENST00000549534 EIF3AQ14152 1382 aaKnown RBP16.19■□□□□ 0.18
TROAP-210ENST00000549534 QSER1Q2KHR3 1735 aa16.19■□□□□ 0.18
TROAP-210ENST00000549534 USP19O94966 1318 aa16.19■□□□□ 0.18
TROAP-210ENST00000549534 ROCK1Q13464 1354 aa16.18■□□□□ 0.18
TROAP-210ENST00000549534 TMEM132EQ6IEE7 984 aa16.18■□□□□ 0.18
TROAP-210ENST00000549534 NGDNQ8NEJ9 315 aaKnown RBP16.18■□□□□ 0.18
TROAP-210ENST00000549534 NMRK2Q9NPI5 230 aa16.18■□□□□ 0.18
TROAP-210ENST00000549534 RGS19P49795 217 aa16.17■□□□□ 0.18
TROAP-210ENST00000549534 PPLO60437 1756 aa16.15■□□□□ 0.18
TROAP-210ENST00000549534 SLC27A3Q5K4L6 730 aa16.15■□□□□ 0.18
TROAP-210ENST00000549534 LRRC4BQ9NT99 713 aa16.15■□□□□ 0.18
TROAP-210ENST00000549534 TFCP2L1Q9NZI6 479 aa16.15■□□□□ 0.18
TROAP-210ENST00000549534 ADGRF5Q8IZF2 1346 aa16.15■□□□□ 0.18
TROAP-210ENST00000549534 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
TROAP-210ENST00000549534 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
TROAP-210ENST00000549534 EXOC5O00471 708 aa16.11■□□□□ 0.17
TROAP-210ENST00000549534 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
TROAP-210ENST00000549534 SMC1BQ8NDV3 1235 aa16.11■□□□□ 0.17
TROAP-210ENST00000549534 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
TROAP-210ENST00000549534 CICQ96RK0 1608 aaPredicted RBP16.1■□□□□ 0.17
TROAP-210ENST00000549534 ABHD8Q96I13 439 aa16.1■□□□□ 0.17
TROAP-210ENST00000549534 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
TROAP-210ENST00000549534 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
TROAP-210ENST00000549534 NHSQ6T4R5 1651 aa16.1■□□□□ 0.17
TROAP-210ENST00000549534 KIAA1210Q9ULL0 1709 aa16.09■□□□□ 0.17
TROAP-210ENST00000549534 PRR36Q9H6K5 1346 aa16.09■□□□□ 0.17
TROAP-210ENST00000549534 NUTM2GQ5VZR2 741 aa16.08■□□□□ 0.16
TROAP-210ENST00000549534 IGSF1Q8N6C5 1336 aa16.08■□□□□ 0.16
TROAP-210ENST00000549534 SAFB2Q14151 953 aaKnown RBP eCLIP16.07■□□□□ 0.16
TROAP-210ENST00000549534 USP6P35125 1406 aa16.07■□□□□ 0.16
TROAP-210ENST00000549534 POGKQ9P215 609 aa16.06■□□□□ 0.16
TROAP-210ENST00000549534 PIK3C2GO75747 1445 aa16.05■□□□□ 0.16
TROAP-210ENST00000549534 KDM2BQ8NHM5 1336 aa16.05■□□□□ 0.16
TROAP-210ENST00000549534 GCP02774 474 aa16.05■□□□□ 0.16
TROAP-210ENST00000549534 PLEKHG2Q9H7P9 1386 aa16.04■□□□□ 0.16
TROAP-210ENST00000549534 WDR17Q8IZU2 1322 aa16.04■□□□□ 0.16
TROAP-210ENST00000549534 FOXN1O15353 648 aa16.04■□□□□ 0.16
TROAP-210ENST00000549534 CTCFP49711 727 aaPredicted RBP16.04■□□□□ 0.16
TROAP-210ENST00000549534 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
TROAP-210ENST00000549534 MSH5O43196 834 aa16.02■□□□□ 0.16
TROAP-210ENST00000549534 APLP2Q06481 763 aa16.02■□□□□ 0.16
TROAP-210ENST00000549534 NLRP13Q86W25 1043 aa16.02■□□□□ 0.16
TROAP-210ENST00000549534 COL23A1Q86Y22 540 aaPredicted RBP16.02■□□□□ 0.16
TROAP-210ENST00000549534 ABTB2Q8N961 1025 aa16.02■□□□□ 0.16
TROAP-210ENST00000549534 PXDNLA1KZ92 1463 aa16.02■□□□□ 0.15
TROAP-210ENST00000549534 TRPM1Q7Z4N2 1603 aa16.01■□□□□ 0.15
TROAP-210ENST00000549534 WNK3Q9BYP7 1800 aa16.01■□□□□ 0.15
TROAP-210ENST00000549534 WASLO00401 505 aaPredicted RBP16.01■□□□□ 0.15
TROAP-210ENST00000549534 CARD10Q9BWT7 1032 aa16.01■□□□□ 0.15
TROAP-210ENST00000549534 C14orf93Q9H972 538 aaKnown RBP16.01■□□□□ 0.15
TROAP-210ENST00000549534 AIDAQ96BJ3 306 aa16■□□□□ 0.15
TROAP-210ENST00000549534 MSL1Q68DK7 614 aa15.99■□□□□ 0.15
TROAP-210ENST00000549534 BTAF1O14981 1849 aa15.97■□□□□ 0.15
TROAP-210ENST00000549534 CCDC85CA6NKD9 419 aa15.97■□□□□ 0.15
TROAP-210ENST00000549534 FLAD1Q8NFF5 587 aa15.96■□□□□ 0.15
TROAP-210ENST00000549534 RRAGCQ9HB90 399 aa15.96■□□□□ 0.15
TROAP-210ENST00000549534 POLR3AO14802 1390 aaPredicted RBP15.96■□□□□ 0.15
TROAP-210ENST00000549534 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
TROAP-210ENST00000549534 TUBGCP6Q96RT7 1819 aa15.96■□□□□ 0.14
TROAP-210ENST00000549534 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
TROAP-210ENST00000549534 ABCC6O95255 1503 aa15.94■□□□□ 0.14
TROAP-210ENST00000549534 ZBTB7CA1YPR0 619 aa15.92■□□□□ 0.14
TROAP-210ENST00000549534 C9orf131Q5VYM1 1079 aa15.92■□□□□ 0.14
TROAP-210ENST00000549534 ARHGAP27Q6ZUM4 889 aa15.92■□□□□ 0.14
TROAP-210ENST00000549534 NUDT16Q96DE0 195 aaKnown RBP15.92■□□□□ 0.14
TROAP-210ENST00000549534 KCPQ6ZWJ8 1503 aa15.92■□□□□ 0.14
TROAP-210ENST00000549534 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
TROAP-210ENST00000549534 LBX1P52954 281 aa15.91■□□□□ 0.14
TROAP-210ENST00000549534 RGL3Q3MIN7 710 aa15.91■□□□□ 0.14
TROAP-210ENST00000549534 CREBZFQ9NS37 354 aa15.91■□□□□ 0.14
TROAP-210ENST00000549534 ACEP12821 1306 aa15.91■□□□□ 0.14
TROAP-210ENST00000549534 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
TROAP-210ENST00000549534 AXIN2Q9Y2T1 843 aa15.9■□□□□ 0.14
TROAP-210ENST00000549534 PPIP5K1Q6PFW1 1433 aa15.9■□□□□ 0.14
TROAP-210ENST00000549534 ITSN1Q15811 1721 aa15.9■□□□□ 0.14
TROAP-210ENST00000549534 SPATA31E1Q6ZUB1 1445 aa15.89■□□□□ 0.13
TROAP-210ENST00000549534 CFAP70Q5T0N1 1121 aa15.89■□□□□ 0.13
TROAP-210ENST00000549534 TNRC6CQ9HCJ0 1690 aaKnown RBP15.89■□□□□ 0.13
TROAP-210ENST00000549534 KCNQ4P56696 695 aa15.88■□□□□ 0.13
TROAP-210ENST00000549534 MKRN1Q9UHC7 482 aaKnown RBP15.88■□□□□ 0.13
TROAP-210ENST00000549534 BCS1LQ9Y276 419 aa15.88■□□□□ 0.13
TROAP-210ENST00000549534 PIK3C2AO00443 1686 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms