RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 PPIP5K1Q6PFW1 1433 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 RAB11FIP3O75154 756 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 PDE4AP27815 886 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 NACAP1Q9BZK3 213 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 TBX22Q9Y458 520 aa11.17□□□□□ -0.62
PPFIA2-216ENST00000549396 PRAG1Q86YV5 1406 aa11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 EXOSC9Q06265 439 aaKnown RBP11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 MYO5CQ9NQX4 1742 aa11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 APPP05067 770 aa11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 PDCP20941 246 aa11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 DHX8Q14562 1220 aaKnown RBP11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 BCL2L13Q9BXK5 485 aa11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 NUTM2GQ5VZR2 741 aa11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 SIRT1Q96EB6 747 aa11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 ADGRF5Q8IZF2 1346 aa11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 TSR1Q2NL82 804 aaKnown RBP11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 LARP1Q6PKG0 1096 aaKnown RBP11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 ASXL1Q8IXJ9 1541 aa11.16□□□□□ -0.62
PPFIA2-216ENST00000549396 ATF7IPQ6VMQ6 1270 aa11.15□□□□□ -0.62
PPFIA2-216ENST00000549396 AKAP2Q9Y2D5 859 aa11.15□□□□□ -0.62
PPFIA2-216ENST00000549396 ABCA8O94911 1581 aa11.15□□□□□ -0.62
PPFIA2-216ENST00000549396 PTPRCP08575 1304 aa11.15□□□□□ -0.62
PPFIA2-216ENST00000549396 C11orf95C9JLR9 678 aaPredicted RBP11.15□□□□□ -0.62
PPFIA2-216ENST00000549396 TAF7Q15545 349 aaPredicted RBP11.15□□□□□ -0.62
PPFIA2-216ENST00000549396 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
PPFIA2-216ENST00000549396 GOLGA6L3A6NEY3 463 aa11.15□□□□□ -0.63
PPFIA2-216ENST00000549396 CDCA7Q9BWT1 371 aaPredicted RBP11.15□□□□□ -0.63
PPFIA2-216ENST00000549396 HYPKQ9NX55 129 aa11.14□□□□□ -0.63
PPFIA2-216ENST00000549396 CTNNA3Q9UI47 895 aa11.14□□□□□ -0.63
PPFIA2-216ENST00000549396 ARAP3Q8WWN8 1544 aa11.14□□□□□ -0.63
PPFIA2-216ENST00000549396 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
PPFIA2-216ENST00000549396 NFXL1Q6ZNB6 911 aa11.14□□□□□ -0.63
PPFIA2-216ENST00000549396 KRT28Q7Z3Y7 464 aa11.14□□□□□ -0.63
PPFIA2-216ENST00000549396 CHMP5Q9NZZ3 219 aa11.14□□□□□ -0.63
PPFIA2-216ENST00000549396 TTC39AQ5SRH9 613 aa11.14□□□□□ -0.63
PPFIA2-216ENST00000549396 NKTRP30414 1462 aaKnown RBP11.14□□□□□ -0.63
PPFIA2-216ENST00000549396 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 CNNM1Q9NRU3 951 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 LRRCC1Q9C099 1032 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 ZNF287Q9HBT7 754 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 SURF6O75683 361 aaKnown RBP11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 SLC4A2P04920 1241 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 AIMP1Q12904 312 aaKnown RBP11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 KRT32Q14532 448 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 RABEP1Q15276 862 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 NEUROD6Q96NK8 337 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 CEP89Q96ST8 783 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 FSD1Q9BTV5 496 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 LETM1O95202 739 aaPredicted RBP11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 MVPQ14764 893 aaKnown RBP11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 ZMYM3Q14202 1370 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 SMARCC1Q92922 1105 aaPredicted RBP11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 SMC3Q9UQE7 1217 aa11.13□□□□□ -0.63
PPFIA2-216ENST00000549396 IGHMBP2P38935 993 aaKnown RBP11.12□□□□□ -0.63
PPFIA2-216ENST00000549396 IFNL2Q8IZJ0 200 aa11.12□□□□□ -0.63
PPFIA2-216ENST00000549396 TPD52L1Q16890 204 aaPredicted RBP11.12□□□□□ -0.63
PPFIA2-216ENST00000549396 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
PPFIA2-216ENST00000549396 WASHC4Q2M389 1173 aa11.12□□□□□ -0.63
PPFIA2-216ENST00000549396 NCBP3Q53F19 620 aaKnown RBP11.12□□□□□ -0.63
PPFIA2-216ENST00000549396 NPC1L1Q9UHC9 1359 aa11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 VPS53Q5VIR6 699 aa11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 SLF2Q8IX21 1173 aa11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 FMNL2Q96PY5 1086 aa11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 CWC22Q9HCG8 908 aaKnown RBP11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 PLXNC1O60486 1568 aa11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 GOLGA6L19H0YKK7 550 aa11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 SLFN5Q08AF3 891 aa11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 C19orf44Q9H6X5 657 aa11.11□□□□□ -0.63
PPFIA2-216ENST00000549396 PIK3C2GO75747 1445 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 EXOC5O00471 708 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 GCC2Q8IWJ2 1684 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 FANCIQ9NVI1 1328 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 BABAM1Q9NWV8 329 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 INSRP06213 1382 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 ABCC1P33527 1531 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 KDM5DQ9BY66 1539 aa11.1□□□□□ -0.63
PPFIA2-216ENST00000549396 CDKL5O76039 1030 aa11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 NECTIN2Q92692 538 aa11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 NOB1Q9ULX3 412 aaKnown RBP11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 NUTM2BA6NNL0 878 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 NUTM2EB1AL46 878 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 NUTM2AQ8IVF1 878 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 DBF4Q9UBU7 674 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 FBXW7Q969H0 707 aa11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 CCDC43Q96MW1 224 aaKnown RBP11.09□□□□□ -0.63
PPFIA2-216ENST00000549396 CCDC27Q2M243 656 aa11.08□□□□□ -0.63
PPFIA2-216ENST00000549396 WAPLQ7Z5K2 1190 aa11.08□□□□□ -0.63
PPFIA2-216ENST00000549396 ZSCAN31Q96LW9 406 aaPredicted RBP11.08□□□□□ -0.63
PPFIA2-216ENST00000549396 C22orf23Q9BZE7 217 aa11.08□□□□□ -0.63
PPFIA2-216ENST00000549396 PLIN1O60240 522 aa11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 POLR3AO14802 1390 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 277.7 ms