RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 NBPF20Q3BBV1 942 aa10.52□□□□□ -0.73
USP15-213ENST00000549268 KCTD15Q96SI1 283 aaPredicted RBP10.52□□□□□ -0.73
USP15-213ENST00000549268 ATP13A2Q9NQ11 1180 aa10.52□□□□□ -0.73
USP15-213ENST00000549268 TIMELESSQ9UNS1 1208 aa10.52□□□□□ -0.73
USP15-213ENST00000549268 WDR4P57081 412 aaKnown RBP10.51□□□□□ -0.73
USP15-213ENST00000549268 NR1H3Q13133 447 aa10.51□□□□□ -0.73
USP15-213ENST00000549268 MCM6Q14566 821 aa10.51□□□□□ -0.73
USP15-213ENST00000549268 ZNF787Q6DD87 383 aa10.51□□□□□ -0.73
USP15-213ENST00000549268 ZNF592Q92610 1267 aa10.51□□□□□ -0.73
USP15-213ENST00000549268 DZIP3Q86Y13 1208 aaKnown RBP10.5□□□□□ -0.73
USP15-213ENST00000549268 CCDC116Q8IYX3 515 aa10.5□□□□□ -0.73
USP15-213ENST00000549268 EMILIN1Q9Y6C2 1016 aa10.5□□□□□ -0.73
USP15-213ENST00000549268 DHX9Q08211 1270 aaKnown RBP10.48□□□□□ -0.73
USP15-213ENST00000549268 SEPT12Q8IYM1 358 aa10.48□□□□□ -0.73
USP15-213ENST00000549268 SENP2Q9HC62 589 aa10.48□□□□□ -0.73
USP15-213ENST00000549268 TBC1D2BQ9UPU7 963 aa10.48□□□□□ -0.73
USP15-213ENST00000549268 ZNF330Q9Y3S2 320 aaPredicted RBP10.48□□□□□ -0.73
USP15-213ENST00000549268 ESPNB1AK53 854 aa10.47□□□□□ -0.73
USP15-213ENST00000549268 ZIC2O95409 532 aaPredicted RBP10.47□□□□□ -0.73
USP15-213ENST00000549268 CCDC125Q86Z20 511 aa10.47□□□□□ -0.73
USP15-213ENST00000549268 ITPKCQ96DU7 683 aa10.47□□□□□ -0.73
USP15-213ENST00000549268 GMPR2Q9P2T1 348 aaKnown RBP10.47□□□□□ -0.73
USP15-213ENST00000549268 POTECB2RU33 542 aa10.46□□□□□ -0.73
USP15-213ENST00000549268 INTS6LQ5JSJ4 861 aaKnown RBP10.46□□□□□ -0.73
USP15-213ENST00000549268 KIFC2Q96AC6 838 aa10.46□□□□□ -0.73
USP15-213ENST00000549268 PPP1R26Q5T8A7 1209 aaPredicted RBP10.45□□□□□ -0.74
USP15-213ENST00000549268 TRIM46Q7Z4K8 759 aa10.45□□□□□ -0.74
USP15-213ENST00000549268 PGPEP1Q9NXJ5 209 aa10.45□□□□□ -0.74
USP15-213ENST00000549268 IRF5Q13568 498 aa10.44□□□□□ -0.74
USP15-213ENST00000549268 TRIM52Q96A61 297 aa10.44□□□□□ -0.74
USP15-213ENST00000549268 TRIM47Q96LD4 638 aa10.44□□□□□ -0.74
USP15-213ENST00000549268 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
USP15-213ENST00000549268 PCDHB9Q9Y5E1 797 aa10.44□□□□□ -0.74
USP15-213ENST00000549268 GDPD2Q9HCC8 539 aa10.43□□□□□ -0.74
USP15-213ENST00000549268 C11orf95C9JLR9 678 aaPredicted RBP10.42□□□□□ -0.74
USP15-213ENST00000549268 UBTFP17480 764 aaKnown RBP10.42□□□□□ -0.74
USP15-213ENST00000549268 MRPL14Q6P1L8 145 aaKnown RBP10.42□□□□□ -0.74
USP15-213ENST00000549268 MEIOBQ8N635 442 aa10.42□□□□□ -0.74
USP15-213ENST00000549268 BMP1P13497 986 aa10.41□□□□□ -0.74
USP15-213ENST00000549268 WASHC4Q2M389 1173 aa10.41□□□□□ -0.74
USP15-213ENST00000549268 RNF20Q5VTR2 975 aa10.41□□□□□ -0.74
USP15-213ENST00000549268 Q6ZVU0 165 aa10.41□□□□□ -0.74
USP15-213ENST00000549268 SCARF1Q14162 830 aa10.4□□□□□ -0.74
USP15-213ENST00000549268 ERVH48-1M5A8F1 160 aa10.39□□□□□ -0.75
USP15-213ENST00000549268 RAD21O60216 631 aa10.39□□□□□ -0.75
USP15-213ENST00000549268 GIGYF1O75420 1035 aaPredicted RBP10.39□□□□□ -0.75
USP15-213ENST00000549268 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
USP15-213ENST00000549268 EIF4G2P78344 907 aaKnown RBP eCLIP10.38□□□□□ -0.75
USP15-213ENST00000549268 ZFP42Q96MM3 310 aa10.38□□□□□ -0.75
USP15-213ENST00000549268 TSEN34Q9BSV6 310 aaKnown RBP10.38□□□□□ -0.75
USP15-213ENST00000549268 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
USP15-213ENST00000549268 ABL2P42684 1182 aa10.37□□□□□ -0.75
USP15-213ENST00000549268 UPP2O95045 317 aa10.36□□□□□ -0.75
USP15-213ENST00000549268 SNRPBP14678 240 aaKnown RBP10.36□□□□□ -0.75
USP15-213ENST00000549268 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
USP15-213ENST00000549268 LILRA1O75019 489 aa10.35□□□□□ -0.75
USP15-213ENST00000549268 SOX11P35716 441 aa10.35□□□□□ -0.75
USP15-213ENST00000549268 ZNF784Q8NCA9 323 aaPredicted RBP10.35□□□□□ -0.75
USP15-213ENST00000549268 CEP126Q9P2H0 1117 aa10.35□□□□□ -0.75
USP15-213ENST00000549268 CLUAP1Q96AJ1 413 aa10.34□□□□□ -0.75
USP15-213ENST00000549268 PURBQ96QR8 312 aaKnown RBP10.34□□□□□ -0.75
USP15-213ENST00000549268 TMPRSS4Q9NRS4 437 aa10.34□□□□□ -0.75
USP15-213ENST00000549268 RAB15P59190 212 aa10.33□□□□□ -0.76
USP15-213ENST00000549268 VAC14Q08AM6 782 aa10.33□□□□□ -0.76
USP15-213ENST00000549268 CBLBQ13191 982 aa10.33□□□□□ -0.76
USP15-213ENST00000549268 WWC1Q8IX03 1113 aa10.33□□□□□ -0.76
USP15-213ENST00000549268 SPINT1O43278 529 aa10.31□□□□□ -0.76
USP15-213ENST00000549268 BMP2P12643 396 aa10.31□□□□□ -0.76
USP15-213ENST00000549268 ZNF775Q96BV0 537 aaPredicted RBP10.31□□□□□ -0.76
USP15-213ENST00000549268 POM121Q96HA1 1249 aa10.31□□□□□ -0.76
USP15-213ENST00000549268 ADH1AP07327 375 aa10.3□□□□□ -0.76
USP15-213ENST00000549268 ADD1P35611 737 aaKnown RBP10.3□□□□□ -0.76
USP15-213ENST00000549268 ERVK-9P63128 1117 aa10.3□□□□□ -0.76
USP15-213ENST00000549268 PHTF2Q8N3S3 785 aa10.3□□□□□ -0.76
USP15-213ENST00000549268 C6orf118Q5T5N4 469 aa10.29□□□□□ -0.76
USP15-213ENST00000549268 SOS2Q07890 1332 aaPredicted RBP10.29□□□□□ -0.76
USP15-213ENST00000549268 SUPT5HO00267 1087 aaKnown RBP10.28□□□□□ -0.76
USP15-213ENST00000549268 CC2D2BQ6DHV5 1058 aa10.28□□□□□ -0.76
USP15-213ENST00000549268 CYLDQ9NQC7 956 aa10.28□□□□□ -0.76
USP15-213ENST00000549268 CHIC2Q9UKJ5 165 aa10.28□□□□□ -0.76
USP15-213ENST00000549268 SEMA3FQ13275 785 aa10.27□□□□□ -0.77
USP15-213ENST00000549268 KDF1Q8NAX2 398 aaPredicted RBP10.27□□□□□ -0.77
USP15-213ENST00000549268 PCDHB11Q9Y5F2 797 aa10.27□□□□□ -0.77
USP15-213ENST00000549268 A6NJR5 290 aa10.26□□□□□ -0.77
USP15-213ENST00000549268 PTGIRP43119 386 aa10.26□□□□□ -0.77
USP15-213ENST00000549268 SLFNL1Q499Z3 407 aa10.26□□□□□ -0.77
USP15-213ENST00000549268 NPAS3Q8IXF0 933 aa10.25□□□□□ -0.77
USP15-213ENST00000549268 AGBL1Q96MI9 1066 aa10.25□□□□□ -0.77
USP15-213ENST00000549268 CCDC85AQ96PX6 553 aaPredicted RBP10.25□□□□□ -0.77
USP15-213ENST00000549268 ALG2Q9H553 416 aa10.25□□□□□ -0.77
USP15-213ENST00000549268 TTLL8A6PVC2 850 aa10.24□□□□□ -0.77
USP15-213ENST00000549268 TRAK2O60296 914 aa10.24□□□□□ -0.77
USP15-213ENST00000549268 MAN1A2O60476 641 aa10.24□□□□□ -0.77
USP15-213ENST00000549268 RELBQ01201 579 aa10.24□□□□□ -0.77
USP15-213ENST00000549268 PROSER2Q86WR7 435 aaPredicted RBP10.24□□□□□ -0.77
USP15-213ENST00000549268 ATP5J2-PTCD1G3V325 749 aa10.23□□□□□ -0.77
USP15-213ENST00000549268 RNF135Q8IUD6 432 aa10.23□□□□□ -0.77
USP15-213ENST00000549268 SCTRP47872 440 aa10.22□□□□□ -0.77
USP15-213ENST00000549268 MAP7D1Q3KQU3 841 aa10.22□□□□□ -0.77
USP15-213ENST00000549268 CYP2U1Q7Z449 544 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms