RNA–Protein interactions for RNA: ENST00000549101.1

USP15-211, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-211ENST00000549101 RAD21O60216 631 aa11.87□□□□□ -0.51
USP15-211ENST00000549101 CTC1Q2NKJ3 1217 aa11.87□□□□□ -0.51
USP15-211ENST00000549101 AXIN1O15169 862 aa11.86□□□□□ -0.51
USP15-211ENST00000549101 SMCPP49901 116 aaPredicted RBP11.86□□□□□ -0.51
USP15-211ENST00000549101 CRIPAKQ8N1N5 446 aa11.86□□□□□ -0.51
USP15-211ENST00000549101 ZNF330Q9Y3S2 320 aaPredicted RBP11.86□□□□□ -0.51
USP15-211ENST00000549101 VAC14Q08AM6 782 aa11.85□□□□□ -0.51
USP15-211ENST00000549101 KLF16Q9BXK1 252 aaPredicted RBP11.85□□□□□ -0.51
USP15-211ENST00000549101 NBPF20Q3BBV1 942 aa11.84□□□□□ -0.51
USP15-211ENST00000549101 WDR4P57081 412 aaKnown RBP11.83□□□□□ -0.52
USP15-211ENST00000549101 WASHC4Q2M389 1173 aa11.83□□□□□ -0.52
USP15-211ENST00000549101 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
USP15-211ENST00000549101 GTF3C3Q9Y5Q9 886 aa11.83□□□□□ -0.52
USP15-211ENST00000549101 CAPN5O15484 640 aaPredicted RBP11.82□□□□□ -0.52
USP15-211ENST00000549101 MCCD1P59942 119 aaPredicted RBP11.82□□□□□ -0.52
USP15-211ENST00000549101 CCDC116Q8IYX3 515 aa11.82□□□□□ -0.52
USP15-211ENST00000549101 CLUAP1Q96AJ1 413 aa11.82□□□□□ -0.52
USP15-211ENST00000549101 DACH1Q9UI36 760 aa11.82□□□□□ -0.52
USP15-211ENST00000549101 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
USP15-211ENST00000549101 TIMP2P16035 220 aa11.81□□□□□ -0.52
USP15-211ENST00000549101 ITPKCQ96DU7 683 aa11.81□□□□□ -0.52
USP15-211ENST00000549101 ESPNB1AK53 854 aa11.8□□□□□ -0.52
USP15-211ENST00000549101 ZIC2O95409 532 aaPredicted RBP11.8□□□□□ -0.52
USP15-211ENST00000549101 RAB15P59190 212 aa11.8□□□□□ -0.52
USP15-211ENST00000549101 EIF4G2P78344 907 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP15-211ENST00000549101 PPP1R26Q5T8A7 1209 aaPredicted RBP11.8□□□□□ -0.52
USP15-211ENST00000549101 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
USP15-211ENST00000549101 ZNF592Q92610 1267 aa11.79□□□□□ -0.52
USP15-211ENST00000549101 EMILIN1Q9Y6C2 1016 aa11.79□□□□□ -0.52
USP15-211ENST00000549101 DHX9Q08211 1270 aaKnown RBP11.78□□□□□ -0.52
USP15-211ENST00000549101 WWC1Q8IX03 1113 aa11.78□□□□□ -0.52
USP15-211ENST00000549101 CEP126Q9P2H0 1117 aa11.78□□□□□ -0.52
USP15-211ENST00000549101 SEPT12Q8IYM1 358 aa11.77□□□□□ -0.53
USP15-211ENST00000549101 ERVH48-1M5A8F1 160 aa11.76□□□□□ -0.53
USP15-211ENST00000549101 TMPRSS4Q9NRS4 437 aa11.75□□□□□ -0.53
USP15-211ENST00000549101 PGPEP1Q9NXJ5 209 aa11.75□□□□□ -0.53
USP15-211ENST00000549101 RNF20Q5VTR2 975 aa11.74□□□□□ -0.53
USP15-211ENST00000549101 ATP13A2Q9NQ11 1180 aa11.74□□□□□ -0.53
USP15-211ENST00000549101 A6NJR5 290 aa11.73□□□□□ -0.53
USP15-211ENST00000549101 SEMA3FQ13275 785 aa11.73□□□□□ -0.53
USP15-211ENST00000549101 FNBP4Q8N3X1 1017 aaPredicted RBP11.73□□□□□ -0.53
USP15-211ENST00000549101 BMP1P13497 986 aa11.72□□□□□ -0.53
USP15-211ENST00000549101 SOX11P35716 441 aa11.72□□□□□ -0.53
USP15-211ENST00000549101 PROSER2Q86WR7 435 aaPredicted RBP11.72□□□□□ -0.53
USP15-211ENST00000549101 POM121CA8CG34 1229 aa11.71□□□□□ -0.53
USP15-211ENST00000549101 POTECB2RU33 542 aa11.71□□□□□ -0.53
USP15-211ENST00000549101 CBLBQ13191 982 aa11.71□□□□□ -0.53
USP15-211ENST00000549101 TRIM46Q7Z4K8 759 aa11.71□□□□□ -0.53
USP15-211ENST00000549101 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
USP15-211ENST00000549101 CCDC125Q86Z20 511 aa11.7□□□□□ -0.54
USP15-211ENST00000549101 PHTF2Q8N3S3 785 aa11.7□□□□□ -0.54
USP15-211ENST00000549101 ALG2Q9H553 416 aa11.7□□□□□ -0.54
USP15-211ENST00000549101 GMPR2Q9P2T1 348 aaKnown RBP11.7□□□□□ -0.54
USP15-211ENST00000549101 LILRA1O75019 489 aa11.69□□□□□ -0.54
USP15-211ENST00000549101 MRPL14Q6P1L8 145 aaKnown RBP11.69□□□□□ -0.54
USP15-211ENST00000549101 TSGA10IPQ3SY00 556 aa11.68□□□□□ -0.54
USP15-211ENST00000549101 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
USP15-211ENST00000549101 Q6ZVU0 165 aa11.68□□□□□ -0.54
USP15-211ENST00000549101 MEIOBQ8N635 442 aa11.68□□□□□ -0.54
USP15-211ENST00000549101 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
USP15-211ENST00000549101 ZNF787Q6DD87 383 aa11.67□□□□□ -0.54
USP15-211ENST00000549101 CYLDQ9NQC7 956 aa11.67□□□□□ -0.54
USP15-211ENST00000549101 PCDHB11Q9Y5F2 797 aa11.67□□□□□ -0.54
USP15-211ENST00000549101 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
USP15-211ENST00000549101 ADAMTS19Q8TE59 1207 aa11.66□□□□□ -0.54
USP15-211ENST00000549101 CCDC85AQ96PX6 553 aaPredicted RBP11.66□□□□□ -0.54
USP15-211ENST00000549101 RNF135Q8IUD6 432 aa11.65□□□□□ -0.54
USP15-211ENST00000549101 ZFP42Q96MM3 310 aa11.65□□□□□ -0.54
USP15-211ENST00000549101 SCARF1Q14162 830 aa11.64□□□□□ -0.55
USP15-211ENST00000549101 AGBL1Q96MI9 1066 aa11.64□□□□□ -0.55
USP15-211ENST00000549101 PURBQ96QR8 312 aaKnown RBP11.64□□□□□ -0.55
USP15-211ENST00000549101 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
USP15-211ENST00000549101 SENP2Q9HC62 589 aa11.64□□□□□ -0.55
USP15-211ENST00000549101 C11orf95C9JLR9 678 aaPredicted RBP11.63□□□□□ -0.55
USP15-211ENST00000549101 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
USP15-211ENST00000549101 C6orf118Q5T5N4 469 aa11.63□□□□□ -0.55
USP15-211ENST00000549101 LINC00528Q8N1L1 170 aa11.63□□□□□ -0.55
USP15-211ENST00000549101 TRIM52Q96A61 297 aa11.63□□□□□ -0.55
USP15-211ENST00000549101 TSEN34Q9BSV6 310 aaKnown RBP11.63□□□□□ -0.55
USP15-211ENST00000549101 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
USP15-211ENST00000549101 PIK3CDO00329 1044 aa11.62□□□□□ -0.55
USP15-211ENST00000549101 TRAK2O60296 914 aa11.62□□□□□ -0.55
USP15-211ENST00000549101 UPP2O95045 317 aa11.62□□□□□ -0.55
USP15-211ENST00000549101 BMP2P12643 396 aa11.62□□□□□ -0.55
USP15-211ENST00000549101 SCTRP47872 440 aa11.62□□□□□ -0.55
USP15-211ENST00000549101 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
USP15-211ENST00000549101 TRIM47Q96LD4 638 aa11.62□□□□□ -0.55
USP15-211ENST00000549101 ZMYND15Q9H091 742 aa11.62□□□□□ -0.55
USP15-211ENST00000549101 ADH1AP07327 375 aa11.6□□□□□ -0.55
USP15-211ENST00000549101 SNRPBP14678 240 aaKnown RBP11.6□□□□□ -0.55
USP15-211ENST00000549101 RELBQ01201 579 aa11.6□□□□□ -0.55
USP15-211ENST00000549101 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
USP15-211ENST00000549101 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
USP15-211ENST00000549101 DOLKQ9UPQ8 538 aa11.6□□□□□ -0.55
USP15-211ENST00000549101 PLPP7Q8NBV4 271 aa11.58□□□□□ -0.56
USP15-211ENST00000549101 GLMNQ92990 594 aa11.58□□□□□ -0.56
USP15-211ENST00000549101 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
USP15-211ENST00000549101 ZNF395Q9H8N7 513 aaPredicted RBP11.58□□□□□ -0.56
USP15-211ENST00000549101 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
USP15-211ENST00000549101 USP4Q13107 963 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms