RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 IGF1RP08069 1367 aa4.63□□□□□ -1.67
DEPDC4-206ENST00000549100 CHRNA4P43681 627 aa4.62□□□□□ -1.67
DEPDC4-206ENST00000549100 TSEN34Q9BSV6 310 aaKnown RBP4.62□□□□□ -1.67
DEPDC4-206ENST00000549100 SUV39H2Q9H5I1 410 aa4.62□□□□□ -1.67
DEPDC4-206ENST00000549100 TULP1O00294 542 aaPredicted RBP4.61□□□□□ -1.67
DEPDC4-206ENST00000549100 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
DEPDC4-206ENST00000549100 ZC3H15Q8WU90 426 aaKnown RBP4.61□□□□□ -1.67
DEPDC4-206ENST00000549100 KRTAP4-5Q9BYR2 181 aa4.61□□□□□ -1.67
DEPDC4-206ENST00000549100 GPR25O00155 361 aa4.6□□□□□ -1.67
DEPDC4-206ENST00000549100 FCHSD2O94868 740 aa4.6□□□□□ -1.67
DEPDC4-206ENST00000549100 NR5A1Q13285 461 aa4.6□□□□□ -1.67
DEPDC4-206ENST00000549100 NBPF11Q86T75 865 aa4.6□□□□□ -1.67
DEPDC4-206ENST00000549100 SULF1Q8IWU6 871 aa4.6□□□□□ -1.67
DEPDC4-206ENST00000549100 GPR37O15354 613 aa4.59□□□□□ -1.67
DEPDC4-206ENST00000549100 CCNYL3P0C7X3 344 aa4.59□□□□□ -1.67
DEPDC4-206ENST00000549100 LAMC2Q13753 1193 aa4.59□□□□□ -1.67
DEPDC4-206ENST00000549100 FAM174AQ8TBP5 190 aa4.59□□□□□ -1.67
DEPDC4-206ENST00000549100 FOXJ1Q92949 421 aa4.59□□□□□ -1.67
DEPDC4-206ENST00000549100 MBIPQ9NS73 344 aa4.59□□□□□ -1.67
DEPDC4-206ENST00000549100 EVA1BQ9NVM1 165 aa4.59□□□□□ -1.67
DEPDC4-206ENST00000549100 SHISA8B8ZZ34 492 aa4.58□□□□□ -1.68
DEPDC4-206ENST00000549100 SPTLC1O15269 473 aa4.58□□□□□ -1.68
DEPDC4-206ENST00000549100 SPINT1O43278 529 aa4.58□□□□□ -1.68
DEPDC4-206ENST00000549100 KDM4AO75164 1064 aa4.58□□□□□ -1.68
DEPDC4-206ENST00000549100 CTSOP43234 321 aaPredicted RBP4.58□□□□□ -1.68
DEPDC4-206ENST00000549100 GRIN2CQ14957 1233 aa4.58□□□□□ -1.68
DEPDC4-206ENST00000549100 RBM26Q5T8P6 1007 aaKnown RBP4.58□□□□□ -1.68
DEPDC4-206ENST00000549100 CBLBQ13191 982 aa4.57□□□□□ -1.68
DEPDC4-206ENST00000549100 RSPO4Q2I0M5 234 aaPredicted RBP4.57□□□□□ -1.68
DEPDC4-206ENST00000549100 C4orf48Q5BLP8 95 aa4.57□□□□□ -1.68
DEPDC4-206ENST00000549100 SMYD5Q6GMV2 418 aa4.57□□□□□ -1.68
DEPDC4-206ENST00000549100 C1orf229Q6ZS94 237 aaPredicted RBP4.57□□□□□ -1.68
DEPDC4-206ENST00000549100 OIP5O43482 229 aa4.56□□□□□ -1.68
DEPDC4-206ENST00000549100 ZMYND10O75800 440 aa4.56□□□□□ -1.68
DEPDC4-206ENST00000549100 CD46P15529 392 aa4.56□□□□□ -1.68
DEPDC4-206ENST00000549100 HOXB4P17483 251 aaPredicted RBP4.56□□□□□ -1.68
DEPDC4-206ENST00000549100 KCNH2Q12809 1159 aa4.56□□□□□ -1.68
DEPDC4-206ENST00000549100 LINC00114Q6XXX2 140 aa4.56□□□□□ -1.68
DEPDC4-206ENST00000549100 SLC24A3Q9HC58 644 aa4.56□□□□□ -1.68
DEPDC4-206ENST00000549100 HOXA2O43364 376 aa4.55□□□□□ -1.68
DEPDC4-206ENST00000549100 BRPF1P55201 1214 aaPredicted RBP4.55□□□□□ -1.68
DEPDC4-206ENST00000549100 FZD5Q13467 585 aa4.55□□□□□ -1.68
DEPDC4-206ENST00000549100 ALYREFQ86V81 257 aaKnown RBP4.55□□□□□ -1.68
DEPDC4-206ENST00000549100 MKL2Q9ULH7 1088 aa4.55□□□□□ -1.68
DEPDC4-206ENST00000549100 MS4A1P11836 297 aa4.54□□□□□ -1.68
DEPDC4-206ENST00000549100 YBX3P16989 372 aaKnown RBP eCLIP4.54□□□□□ -1.68
DEPDC4-206ENST00000549100 NKAPLQ5M9Q1 402 aa4.54□□□□□ -1.68
DEPDC4-206ENST00000549100 GPIHBP1Q8IV16 184 aa4.54□□□□□ -1.68
DEPDC4-206ENST00000549100 BARGINQ6ZT62 677 aa4.53□□□□□ -1.68
DEPDC4-206ENST00000549100 RETREG3Q86VR2 466 aa4.53□□□□□ -1.68
DEPDC4-206ENST00000549100 ZNF837Q96EG3 531 aaPredicted RBP4.53□□□□□ -1.68
DEPDC4-206ENST00000549100 INSM2Q96T92 566 aaPredicted RBP4.53□□□□□ -1.68
DEPDC4-206ENST00000549100 LRRC4BQ9NT99 713 aa4.53□□□□□ -1.68
DEPDC4-206ENST00000549100 HYAL3O43820 417 aaPredicted RBP4.52□□□□□ -1.69
DEPDC4-206ENST00000549100 HIC1Q14526 733 aa4.52□□□□□ -1.69
DEPDC4-206ENST00000549100 PTPRNQ16849 979 aa4.52□□□□□ -1.69
DEPDC4-206ENST00000549100 MCTP1Q6DN14 999 aa4.52□□□□□ -1.69
DEPDC4-206ENST00000549100 RNF217Q8TC41 542 aa4.52□□□□□ -1.69
DEPDC4-206ENST00000549100 AGBL1Q96MI9 1066 aa4.52□□□□□ -1.69
DEPDC4-206ENST00000549100 DBN1Q16643 649 aa4.51□□□□□ -1.69
DEPDC4-206ENST00000549100 Q6ZVU0 165 aa4.51□□□□□ -1.69
DEPDC4-206ENST00000549100 RRAGCQ9HB90 399 aa4.51□□□□□ -1.69
DEPDC4-206ENST00000549100 PCDHGC3Q9UN70 934 aa4.51□□□□□ -1.69
DEPDC4-206ENST00000549100 FSHRP23945 695 aa4.5□□□□□ -1.69
DEPDC4-206ENST00000549100 NEUROD2Q15784 382 aa4.5□□□□□ -1.69
DEPDC4-206ENST00000549100 TMEM132AQ24JP5 1023 aa4.5□□□□□ -1.69
DEPDC4-206ENST00000549100 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
DEPDC4-206ENST00000549100 DYRK3O43781 588 aa4.49□□□□□ -1.69
DEPDC4-206ENST00000549100 PRSS36Q5K4E3 855 aa4.49□□□□□ -1.69
DEPDC4-206ENST00000549100 USP46P62068 366 aa4.48□□□□□ -1.69
DEPDC4-206ENST00000549100 GTPBP3Q969Y2 492 aaKnown RBP4.48□□□□□ -1.69
DEPDC4-206ENST00000549100 FMNL2Q96PY5 1086 aa4.48□□□□□ -1.69
DEPDC4-206ENST00000549100 EMILIN1Q9Y6C2 1016 aa4.48□□□□□ -1.69
DEPDC4-206ENST00000549100 GATA4P43694 442 aa4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 RELBQ01201 579 aa4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 LRP8Q14114 963 aa4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 TRIM22Q8IYM9 498 aa4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 KRI1Q8N9T8 703 aaKnown RBP4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 AK7Q96M32 723 aa4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 OXCT2Q9BYC2 517 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 ZNF395Q9H8N7 513 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 GPBP1L1Q9HC44 474 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 TPSG1Q9NRR2 321 aa4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 GTF3C3Q9Y5Q9 886 aa4.47□□□□□ -1.69
DEPDC4-206ENST00000549100 TRIM66O15016 1216 aa4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 GNPATO15228 680 aa4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 MX2P20592 715 aa4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 TXKP42681 527 aa4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 PPP1R26Q5T8A7 1209 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 FOXD4L5Q5VV16 416 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 RIC3Q7Z5B4 369 aa4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 CCDC116Q8IYX3 515 aa4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 POLMQ9NP87 494 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-206ENST00000549100 C6orf229H3BNL8 230 aa4.45□□□□□ -1.7
DEPDC4-206ENST00000549100 EDARADDQ8WWZ3 215 aa4.45□□□□□ -1.7
DEPDC4-206ENST00000549100 CCDC102AQ96A19 550 aa4.45□□□□□ -1.7
DEPDC4-206ENST00000549100 TIMELESSQ9UNS1 1208 aa4.45□□□□□ -1.7
DEPDC4-206ENST00000549100 COL17A1Q9UMD9 1497 aaPredicted RBP4.44□□□□□ -1.7
DEPDC4-206ENST00000549100 RHOQP17081 205 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms