RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
SLC38A1-205ENST00000548979 GPCPD1Q9NPB8 672 aa12.8□□□□□ -0.36
SLC38A1-205ENST00000548979 CD46P15529 392 aa12.79□□□□□ -0.36
SLC38A1-205ENST00000548979 FAM217BQ9NTX9 383 aaPredicted RBP12.79□□□□□ -0.36
SLC38A1-205ENST00000548979 SHANK2Q9UPX8 1470 aa12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 CLCN1P35523 988 aa12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 GCGRP47871 477 aa12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 KCNC4Q03721 635 aa12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 KMT5BQ4FZB7 885 aa12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 PCDHB3Q9Y5E6 796 aa12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 ABCC5O15440 1437 aa12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 PTPRKQ15262 1439 aa12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
SLC38A1-205ENST00000548979 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.36
SLC38A1-205ENST00000548979 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.36
SLC38A1-205ENST00000548979 SULF1Q8IWU6 871 aa12.77□□□□□ -0.37
SLC38A1-205ENST00000548979 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.37
SLC38A1-205ENST00000548979 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.37
SLC38A1-205ENST00000548979 KDM5DQ9BY66 1539 aa12.77□□□□□ -0.37
SLC38A1-205ENST00000548979 DUOX2Q9NRD8 1548 aa12.77□□□□□ -0.37
SLC38A1-205ENST00000548979 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
SLC38A1-205ENST00000548979 PARP9Q8IXQ6 854 aa12.76□□□□□ -0.37
SLC38A1-205ENST00000548979 FBXO41Q8TF61 875 aa12.76□□□□□ -0.37
SLC38A1-205ENST00000548979 IL21Q9HBE4 155 aa12.76□□□□□ -0.37
SLC38A1-205ENST00000548979 KIF15Q9NS87 1388 aa12.76□□□□□ -0.37
SLC38A1-205ENST00000548979 PTPRTO14522 1441 aa12.75□□□□□ -0.37
SLC38A1-205ENST00000548979 DAPK1P53355 1430 aa12.75□□□□□ -0.37
SLC38A1-205ENST00000548979 FUT2Q10981 343 aa12.75□□□□□ -0.37
SLC38A1-205ENST00000548979 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
SLC38A1-205ENST00000548979 RRP7BPQ9NSQ0 103 aa12.75□□□□□ -0.37
SLC38A1-205ENST00000548979 EIF2AK4Q9P2K8 1649 aaKnown RBP12.74□□□□□ -0.37
SLC38A1-205ENST00000548979 PZPP20742 1482 aa12.74□□□□□ -0.37
SLC38A1-205ENST00000548979 ERBINQ96RT1 1412 aa12.74□□□□□ -0.37
SLC38A1-205ENST00000548979 FAM50AQ14320 339 aaKnown RBP12.74□□□□□ -0.37
SLC38A1-205ENST00000548979 PRR14Q9BWN1 585 aa12.74□□□□□ -0.37
SLC38A1-205ENST00000548979 TNRQ92752 1358 aa12.73□□□□□ -0.37
SLC38A1-205ENST00000548979 SSTR3P32745 418 aaPredicted RBP12.73□□□□□ -0.37
SLC38A1-205ENST00000548979 GIGYF2Q6Y7W6 1299 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-205ENST00000548979 NCOA1Q15788 1441 aa12.72□□□□□ -0.37
SLC38A1-205ENST00000548979 KANK1Q14678 1352 aa12.72□□□□□ -0.37
SLC38A1-205ENST00000548979 PDE4DQ08499 809 aa12.72□□□□□ -0.37
SLC38A1-205ENST00000548979 DNMT1P26358 1616 aaKnown RBP12.72□□□□□ -0.37
SLC38A1-205ENST00000548979 PLA2R1Q13018 1463 aa12.72□□□□□ -0.37
SLC38A1-205ENST00000548979 RNF17Q9BXT8 1623 aaKnown RBP12.71□□□□□ -0.37
SLC38A1-205ENST00000548979 TLL1O43897 1013 aa12.71□□□□□ -0.37
SLC38A1-205ENST00000548979 ZPR1O75312 459 aa12.71□□□□□ -0.37
SLC38A1-205ENST00000548979 FBXO31Q5XUX0 539 aaPredicted RBP12.71□□□□□ -0.37
SLC38A1-205ENST00000548979 THEMISQ8N1K5 641 aaPredicted RBP12.71□□□□□ -0.37
SLC38A1-205ENST00000548979 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.37
SLC38A1-205ENST00000548979 A2ML1A8K2U0 1454 aa12.71□□□□□ -0.38
SLC38A1-205ENST00000548979 HLA-CQ95604 372 aa12.7□□□□□ -0.38
SLC38A1-205ENST00000548979 NLRP1Q9C000 1473 aa12.7□□□□□ -0.38
SLC38A1-205ENST00000548979 CAMSAP1Q5T5Y3 1602 aa12.7□□□□□ -0.38
SLC38A1-205ENST00000548979 A0A0G2JS52 829 aa12.69□□□□□ -0.38
SLC38A1-205ENST00000548979 MS4A1P11836 297 aa12.69□□□□□ -0.38
SLC38A1-205ENST00000548979 MORN1Q5T089 497 aa12.69□□□□□ -0.38
SLC38A1-205ENST00000548979 CROCC2H7BZ55 1655 aa12.69□□□□□ -0.38
SLC38A1-205ENST00000548979 ZC3H13Q5T200 1668 aaKnown RBP12.69□□□□□ -0.38
SLC38A1-205ENST00000548979 STRCQ7RTU9 1775 aa12.69□□□□□ -0.38
SLC38A1-205ENST00000548979 CEP170BQ9Y4F5 1589 aaPredicted RBP12.69□□□□□ -0.38
SLC38A1-205ENST00000548979 ABCC3O15438 1527 aa12.68□□□□□ -0.38
SLC38A1-205ENST00000548979 ZNF142P52746 1687 aaPredicted RBP12.68□□□□□ -0.38
SLC38A1-205ENST00000548979 ADGRL2O95490 1459 aa12.68□□□□□ -0.38
SLC38A1-205ENST00000548979 TPRNQ4KMQ1 711 aa12.68□□□□□ -0.38
SLC38A1-205ENST00000548979 SCUBE3Q8IX30 993 aa12.68□□□□□ -0.38
SLC38A1-205ENST00000548979 MYO3AQ8NEV4 1616 aa12.68□□□□□ -0.38
SLC38A1-205ENST00000548979 ANKLE2Q86XL3 938 aa12.67□□□□□ -0.38
SLC38A1-205ENST00000548979 ARHGAP31Q2M1Z3 1444 aa12.67□□□□□ -0.38
SLC38A1-205ENST00000548979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.67□□□□□ -0.38
SLC38A1-205ENST00000548979 KDM4AO75164 1064 aa12.66□□□□□ -0.38
SLC38A1-205ENST00000548979 ATP6V1AP38606 617 aa12.66□□□□□ -0.38
SLC38A1-205ENST00000548979 SLC27A5Q9Y2P5 690 aa12.66□□□□□ -0.38
SLC38A1-205ENST00000548979 PRDM15P57071 1507 aaPredicted RBP12.64□□□□□ -0.39
SLC38A1-205ENST00000548979 GUCA2AQ02747 115 aa12.64□□□□□ -0.39
SLC38A1-205ENST00000548979 ROCK1Q13464 1354 aa12.64□□□□□ -0.39
SLC38A1-205ENST00000548979 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
SLC38A1-205ENST00000548979 ERVK-7P63135 1459 aa12.63□□□□□ -0.39
SLC38A1-205ENST00000548979 SPATA31D1Q6ZQQ2 1576 aa12.63□□□□□ -0.39
SLC38A1-205ENST00000548979 MROH1Q8NDA8 1641 aa12.62□□□□□ -0.39
SLC38A1-205ENST00000548979 UGGT1Q9NYU2 1555 aa12.62□□□□□ -0.39
SLC38A1-205ENST00000548979 NR1I2O75469 434 aa12.62□□□□□ -0.39
SLC38A1-205ENST00000548979 PPP1R18Q6NYC8 613 aa12.62□□□□□ -0.39
SLC38A1-205ENST00000548979 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
SLC38A1-205ENST00000548979 GPBP1L1Q9HC44 474 aaPredicted RBP12.62□□□□□ -0.39
SLC38A1-205ENST00000548979 THAP11Q96EK4 314 aa12.61□□□□□ -0.39
SLC38A1-205ENST00000548979 DEPDC5O75140 1603 aa12.61□□□□□ -0.39
SLC38A1-205ENST00000548979 LMTK2Q8IWU2 1503 aa12.61□□□□□ -0.39
SLC38A1-205ENST00000548979 HOXA2O43364 376 aa12.6□□□□□ -0.39
SLC38A1-205ENST00000548979 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
SLC38A1-205ENST00000548979 SPIRE2Q8WWL2 714 aa12.6□□□□□ -0.39
SLC38A1-205ENST00000548979 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
SLC38A1-205ENST00000548979 RNF19BQ6ZMZ0 732 aa12.59□□□□□ -0.39
SLC38A1-205ENST00000548979 SLC52A1Q9NWF4 448 aa12.59□□□□□ -0.39
SLC38A1-205ENST00000548979 EID1Q9Y6B2 187 aa12.59□□□□□ -0.39
SLC38A1-205ENST00000548979 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
SLC38A1-205ENST00000548979 CEP152O94986 1710 aa12.57□□□□□ -0.4
SLC38A1-205ENST00000548979 VWDEQ8N2E2 1590 aa12.57□□□□□ -0.4
SLC38A1-205ENST00000548979 NDUFV2P19404 249 aa12.57□□□□□ -0.4
SLC38A1-205ENST00000548979 NUTM1Q86Y26 1132 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms