RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 YEATS2Q9ULM3 1422 aa17.66■□□□□ 0.42
RAPGEF3-218ENST00000548919 ARHGEF40Q8TER5 1519 aa17.66■□□□□ 0.42
RAPGEF3-218ENST00000548919 HSP90AA1P07900 732 aaKnown RBP17.66■□□□□ 0.42
RAPGEF3-218ENST00000548919 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
RAPGEF3-218ENST00000548919 GRPEL1Q9HAV7 217 aa17.66■□□□□ 0.42
RAPGEF3-218ENST00000548919 MRE11P49959 708 aa17.65■□□□□ 0.42
RAPGEF3-218ENST00000548919 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
RAPGEF3-218ENST00000548919 MAP2P11137 1827 aaKnown RBP17.65■□□□□ 0.42
RAPGEF3-218ENST00000548919 BRPF1P55201 1214 aaPredicted RBP17.65■□□□□ 0.42
RAPGEF3-218ENST00000548919 FAM83GA6ND36 823 aa17.64■□□□□ 0.41
RAPGEF3-218ENST00000548919 C8orf58Q8NAV2 365 aa17.64■□□□□ 0.41
RAPGEF3-218ENST00000548919 ALKQ9UM73 1620 aa17.64■□□□□ 0.41
RAPGEF3-218ENST00000548919 STAG3Q9UJ98 1225 aa17.63■□□□□ 0.41
RAPGEF3-218ENST00000548919 CDC42BPGQ6DT37 1551 aa17.63■□□□□ 0.41
RAPGEF3-218ENST00000548919 PREX1Q8TCU6 1659 aa17.63■□□□□ 0.41
RAPGEF3-218ENST00000548919 RAB3GAP1Q15042 981 aa17.63■□□□□ 0.41
RAPGEF3-218ENST00000548919 TWISTNBQ3B726 338 aaPredicted RBP17.63■□□□□ 0.41
RAPGEF3-218ENST00000548919 ZNF428Q96B54 188 aa17.63■□□□□ 0.41
RAPGEF3-218ENST00000548919 GAS2L3Q86XJ1 694 aa17.62■□□□□ 0.41
RAPGEF3-218ENST00000548919 NME9Q86XW9 330 aa17.62■□□□□ 0.41
RAPGEF3-218ENST00000548919 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
RAPGEF3-218ENST00000548919 GNAI1P63096 354 aa17.62■□□□□ 0.41
RAPGEF3-218ENST00000548919 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
RAPGEF3-218ENST00000548919 ABCC4O15439 1325 aa17.62■□□□□ 0.41
RAPGEF3-218ENST00000548919 ARHGAP45Q92619 1136 aa17.62■□□□□ 0.41
RAPGEF3-218ENST00000548919 IL13P35225 146 aa17.61■□□□□ 0.41
RAPGEF3-218ENST00000548919 IFT57Q9NWB7 429 aa17.61■□□□□ 0.41
RAPGEF3-218ENST00000548919 PIK3R4Q99570 1358 aa17.61■□□□□ 0.41
RAPGEF3-218ENST00000548919 K7ELQ4 463 aaPredicted RBP17.61■□□□□ 0.41
RAPGEF3-218ENST00000548919 GAS2L2Q8NHY3 880 aa17.61■□□□□ 0.41
RAPGEF3-218ENST00000548919 GBP4Q96PP9 640 aa17.61■□□□□ 0.41
RAPGEF3-218ENST00000548919 CIZ1Q9ULV3 898 aaPredicted RBP17.6■□□□□ 0.41
RAPGEF3-218ENST00000548919 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
RAPGEF3-218ENST00000548919 GSPT1P15170 499 aaKnown RBP17.6■□□□□ 0.41
RAPGEF3-218ENST00000548919 NEO1Q92859 1461 aa17.59■□□□□ 0.41
RAPGEF3-218ENST00000548919 SSFA2P28290 1259 aa17.59■□□□□ 0.41
RAPGEF3-218ENST00000548919 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
RAPGEF3-218ENST00000548919 NCKAP5LQ9HCH0 1330 aa17.59■□□□□ 0.41
RAPGEF3-218ENST00000548919 CALD1Q05682 793 aaKnown RBP17.58■□□□□ 0.41
RAPGEF3-218ENST00000548919 C16orf71Q8IYS4 520 aaPredicted RBP17.58■□□□□ 0.41
RAPGEF3-218ENST00000548919 AK9Q5TCS8 1911 aa17.58■□□□□ 0.4
RAPGEF3-218ENST00000548919 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.4
RAPGEF3-218ENST00000548919 CDC45O75419 566 aa17.57■□□□□ 0.4
RAPGEF3-218ENST00000548919 CLCN1P35523 988 aa17.57■□□□□ 0.4
RAPGEF3-218ENST00000548919 RICTORQ6R327 1708 aa17.57■□□□□ 0.4
RAPGEF3-218ENST00000548919 NAP1L5Q96NT1 182 aaPredicted RBP17.57■□□□□ 0.4
RAPGEF3-218ENST00000548919 ERBB4Q15303 1308 aa17.57■□□□□ 0.4
RAPGEF3-218ENST00000548919 DLG5Q8TDM6 1919 aa17.57■□□□□ 0.4
RAPGEF3-218ENST00000548919 PLEKHM2Q8IWE5 1019 aa17.57■□□□□ 0.4
RAPGEF3-218ENST00000548919 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
RAPGEF3-218ENST00000548919 KNDC1Q76NI1 1749 aa17.56■□□□□ 0.4
RAPGEF3-218ENST00000548919 KRT24Q2M2I5 525 aa17.56■□□□□ 0.4
RAPGEF3-218ENST00000548919 OTUD7AQ8TE49 926 aaPredicted RBP17.55■□□□□ 0.4
RAPGEF3-218ENST00000548919 APBB1O00213 710 aa17.55■□□□□ 0.4
RAPGEF3-218ENST00000548919 ATP7BP35670 1465 aa17.55■□□□□ 0.4
RAPGEF3-218ENST00000548919 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
RAPGEF3-218ENST00000548919 API5Q9BZZ5 524 aaKnown RBP17.54■□□□□ 0.4
RAPGEF3-218ENST00000548919 RIMS2Q9UQ26 1411 aa17.53■□□□□ 0.4
RAPGEF3-218ENST00000548919 ESPNB1AK53 854 aa17.52■□□□□ 0.4
RAPGEF3-218ENST00000548919 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.4
RAPGEF3-218ENST00000548919 AEBP1Q8IUX7 1158 aa17.52■□□□□ 0.4
RAPGEF3-218ENST00000548919 DCTPP1Q9H773 170 aa17.52■□□□□ 0.4
RAPGEF3-218ENST00000548919 SMARCA5O60264 1052 aaPredicted RBP17.51■□□□□ 0.39
RAPGEF3-218ENST00000548919 ISY1Q9ULR0 285 aaKnown RBP17.51■□□□□ 0.39
RAPGEF3-218ENST00000548919 TTC22Q5TAA0 569 aa17.51■□□□□ 0.39
RAPGEF3-218ENST00000548919 CDK12Q9NYV4 1490 aaPredicted RBP17.51■□□□□ 0.39
RAPGEF3-218ENST00000548919 LMOD3Q0VAK6 560 aa17.51■□□□□ 0.39
RAPGEF3-218ENST00000548919 COG3Q96JB2 828 aa17.51■□□□□ 0.39
RAPGEF3-218ENST00000548919 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
RAPGEF3-218ENST00000548919 WASLO00401 505 aaPredicted RBP17.5■□□□□ 0.39
RAPGEF3-218ENST00000548919 BAG4O95429 457 aaKnown RBP17.5■□□□□ 0.39
RAPGEF3-218ENST00000548919 TXNDC2Q86VQ3 553 aa17.5■□□□□ 0.39
RAPGEF3-218ENST00000548919 CPSF1Q10570 1443 aaKnown RBP17.5■□□□□ 0.39
RAPGEF3-218ENST00000548919 TRIM44Q96DX7 344 aaPredicted RBP17.5■□□□□ 0.39
RAPGEF3-218ENST00000548919 CPS1P31327 1500 aa17.49■□□□□ 0.39
RAPGEF3-218ENST00000548919 PKP1Q13835 747 aa17.49■□□□□ 0.39
RAPGEF3-218ENST00000548919 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
RAPGEF3-218ENST00000548919 UBE2Q2Q8WVN8 375 aa17.49■□□□□ 0.39
RAPGEF3-218ENST00000548919 MCM10Q7L590 875 aa17.48■□□□□ 0.39
RAPGEF3-218ENST00000548919 NUDT16Q96DE0 195 aaKnown RBP17.48■□□□□ 0.39
RAPGEF3-218ENST00000548919 USP26Q9BXU7 913 aa17.48■□□□□ 0.39
RAPGEF3-218ENST00000548919 RABEP1Q15276 862 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 INTS3Q68E01 1043 aaKnown RBP17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 GOLGA6L22H0YM25 854 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 SDSP20132 328 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 MCTP1Q6DN14 999 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 SULT6B1Q6IMI4 303 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 ANKRD44Q8N8A2 993 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 ATP10DQ9P241 1426 aa17.47■□□□□ 0.39
RAPGEF3-218ENST00000548919 CEP85Q6P2H3 762 aa17.46■□□□□ 0.39
RAPGEF3-218ENST00000548919 MEIS3Q99687 375 aa17.46■□□□□ 0.39
RAPGEF3-218ENST00000548919 MSH6P52701 1360 aa17.46■□□□□ 0.39
RAPGEF3-218ENST00000548919 A2ML1A8K2U0 1454 aa17.46■□□□□ 0.39
RAPGEF3-218ENST00000548919 DLC1Q96QB1 1528 aa17.46■□□□□ 0.39
RAPGEF3-218ENST00000548919 RGS12O14924 1447 aa17.46■□□□□ 0.38
RAPGEF3-218ENST00000548919 METP08581 1390 aa17.46■□□□□ 0.38
RAPGEF3-218ENST00000548919 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms