RNA–Protein interactions for RNA: ENST00000548855.5

PDE1B-205, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 4,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-205ENST00000548855 RBM33Q96EV2 1170 aaKnown RBP15.95■□□□□ 0.14
PDE1B-205ENST00000548855 BTBD11A6QL63 1104 aa15.94■□□□□ 0.14
PDE1B-205ENST00000548855 TRIM27P14373 513 aa15.94■□□□□ 0.14
PDE1B-205ENST00000548855 COL17A1Q9UMD9 1497 aaPredicted RBP15.94■□□□□ 0.14
PDE1B-205ENST00000548855 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
PDE1B-205ENST00000548855 TOM1L2Q6ZVM7 507 aa15.94■□□□□ 0.14
PDE1B-205ENST00000548855 GCC2Q8IWJ2 1684 aa15.94■□□□□ 0.14
PDE1B-205ENST00000548855 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
PDE1B-205ENST00000548855 FOXO3O43524 673 aa15.93■□□□□ 0.14
PDE1B-205ENST00000548855 ATP7AQ04656 1500 aa15.93■□□□□ 0.14
PDE1B-205ENST00000548855 POLR3AO14802 1390 aaPredicted RBP15.93■□□□□ 0.14
PDE1B-205ENST00000548855 RIMS2Q9UQ26 1411 aa15.93■□□□□ 0.14
PDE1B-205ENST00000548855 CABP4P57796 275 aa15.93■□□□□ 0.14
PDE1B-205ENST00000548855 MAST1Q9Y2H9 1570 aa15.92■□□□□ 0.14
PDE1B-205ENST00000548855 TULP1O00294 542 aaPredicted RBP15.92■□□□□ 0.14
PDE1B-205ENST00000548855 RABEP1Q15276 862 aa15.92■□□□□ 0.14
PDE1B-205ENST00000548855 SMC3Q9UQE7 1217 aa15.92■□□□□ 0.14
PDE1B-205ENST00000548855 MBD5Q9P267 1494 aa15.92■□□□□ 0.14
PDE1B-205ENST00000548855 ERC1Q8IUD2 1116 aa15.92■□□□□ 0.14
PDE1B-205ENST00000548855 NEK4P51957 841 aa15.92■□□□□ 0.14
PDE1B-205ENST00000548855 FSD1Q9BTV5 496 aa15.92■□□□□ 0.14
PDE1B-205ENST00000548855 IL16Q14005 1332 aa15.91■□□□□ 0.14
PDE1B-205ENST00000548855 TTC21BQ7Z4L5 1316 aa15.91■□□□□ 0.14
PDE1B-205ENST00000548855 APPP05067 770 aa15.91■□□□□ 0.14
PDE1B-205ENST00000548855 USHBP1Q8N6Y0 703 aa15.91■□□□□ 0.14
PDE1B-205ENST00000548855 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
PDE1B-205ENST00000548855 CCDC34Q96HJ3 373 aa15.91■□□□□ 0.14
PDE1B-205ENST00000548855 ABCA8O94911 1581 aa15.9■□□□□ 0.14
PDE1B-205ENST00000548855 PIK3C2GO75747 1445 aa15.9■□□□□ 0.14
PDE1B-205ENST00000548855 SRGAP3O43295 1099 aa15.9■□□□□ 0.14
PDE1B-205ENST00000548855 CPLX2Q6PUV4 134 aaKnown RBP15.9■□□□□ 0.14
PDE1B-205ENST00000548855 DDX54Q8TDD1 881 aaKnown RBP15.9■□□□□ 0.14
PDE1B-205ENST00000548855 MCTP1Q6DN14 999 aa15.9■□□□□ 0.14
PDE1B-205ENST00000548855 MYL6BP14649 208 aa15.89■□□□□ 0.13
PDE1B-205ENST00000548855 VPS37CA5D8V6 355 aaPredicted RBP15.89■□□□□ 0.13
PDE1B-205ENST00000548855 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
PDE1B-205ENST00000548855 ARHGEF5Q12774 1597 aa15.89■□□□□ 0.13
PDE1B-205ENST00000548855 FAM83GA6ND36 823 aa15.89■□□□□ 0.13
PDE1B-205ENST00000548855 TRDNQ13061 729 aa15.88■□□□□ 0.13
PDE1B-205ENST00000548855 CCDC27Q2M243 656 aa15.88■□□□□ 0.13
PDE1B-205ENST00000548855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.13
PDE1B-205ENST00000548855 G3V3G9 751 aa15.88■□□□□ 0.13
PDE1B-205ENST00000548855 DCAF8Q5TAQ9 597 aa15.88■□□□□ 0.13
PDE1B-205ENST00000548855 MBIPQ9NS73 344 aa15.88■□□□□ 0.13
PDE1B-205ENST00000548855 TPM4P67936 248 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 SYNE3Q6ZMZ3 975 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 EXOC6BQ9Y2D4 811 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 CPLX1O14810 134 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 PPIP5K1Q6PFW1 1433 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 MCM2P49736 904 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 POLKQ9UBT6 870 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 PLEKHH1Q9ULM0 1364 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 WASHC4Q2M389 1173 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 IL1RAPL2Q9NP60 686 aa15.87■□□□□ 0.13
PDE1B-205ENST00000548855 AMOTQ4VCS5 1084 aa15.86■□□□□ 0.13
PDE1B-205ENST00000548855 SPATA31E1Q6ZUB1 1445 aa15.86■□□□□ 0.13
PDE1B-205ENST00000548855 VPS37DQ86XT2 251 aa15.86■□□□□ 0.13
PDE1B-205ENST00000548855 SIL1Q9H173 461 aa15.86■□□□□ 0.13
PDE1B-205ENST00000548855 ADGBQ8N7X0 1667 aa15.86■□□□□ 0.13
PDE1B-205ENST00000548855 F6X3S4 739 aa15.86■□□□□ 0.13
PDE1B-205ENST00000548855 HIP1O00291 1037 aa15.86■□□□□ 0.13
PDE1B-205ENST00000548855 KDM6BO15054 1643 aa15.86■□□□□ 0.13
PDE1B-205ENST00000548855 PSMA5P28066 241 aa15.85■□□□□ 0.13
PDE1B-205ENST00000548855 IGHDP01880 384 aa15.85■□□□□ 0.13
PDE1B-205ENST00000548855 KIF6Q6ZMV9 814 aa15.85■□□□□ 0.13
PDE1B-205ENST00000548855 DNAJC2Q99543 621 aaKnown RBP15.85■□□□□ 0.13
PDE1B-205ENST00000548855 A0A1W2PP64 1363 aa15.85■□□□□ 0.13
PDE1B-205ENST00000548855 NPC1L1Q9UHC9 1359 aa15.84■□□□□ 0.13
PDE1B-205ENST00000548855 AKAP17AQ02040 695 aaKnown RBP15.84■□□□□ 0.13
PDE1B-205ENST00000548855 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
PDE1B-205ENST00000548855 YTHDC2Q9H6S0 1430 aaKnown RBP15.84■□□□□ 0.13
PDE1B-205ENST00000548855 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.84■□□□□ 0.13
PDE1B-205ENST00000548855 TTC21AQ8NDW8 1320 aa15.83■□□□□ 0.13
PDE1B-205ENST00000548855 TRAK2O60296 914 aa15.83■□□□□ 0.12
PDE1B-205ENST00000548855 MPRIPQ6WCQ1 1025 aa15.83■□□□□ 0.12
PDE1B-205ENST00000548855 ZMYM3Q14202 1370 aa15.83■□□□□ 0.12
PDE1B-205ENST00000548855 K7ELQ4 463 aaPredicted RBP15.83■□□□□ 0.12
PDE1B-205ENST00000548855 RALYLQ86SE5 291 aaKnown RBP15.83■□□□□ 0.12
PDE1B-205ENST00000548855 RASSF8Q8NHQ8 419 aa15.82■□□□□ 0.12
PDE1B-205ENST00000548855 PTPRCP08575 1304 aa15.82■□□□□ 0.12
PDE1B-205ENST00000548855 MSH5O43196 834 aa15.82■□□□□ 0.12
PDE1B-205ENST00000548855 MAP4K4O95819 1239 aaPredicted RBP15.82■□□□□ 0.12
PDE1B-205ENST00000548855 FAM177BA6PVY3 158 aa15.81■□□□□ 0.12
PDE1B-205ENST00000548855 FLIIQ13045 1269 aa15.81■□□□□ 0.12
PDE1B-205ENST00000548855 SMARCA5O60264 1052 aaPredicted RBP15.81■□□□□ 0.12
PDE1B-205ENST00000548855 AACSQ86V21 672 aa15.81■□□□□ 0.12
PDE1B-205ENST00000548855 BICD2Q8TD16 824 aa15.81■□□□□ 0.12
PDE1B-205ENST00000548855 TRIM29Q14134 588 aa15.8■□□□□ 0.12
PDE1B-205ENST00000548855 KRT28Q7Z3Y7 464 aa15.8■□□□□ 0.12
PDE1B-205ENST00000548855 AEBP1Q8IUX7 1158 aa15.8■□□□□ 0.12
PDE1B-205ENST00000548855 PCDHB15Q9Y5E8 787 aa15.8■□□□□ 0.12
PDE1B-205ENST00000548855 ARHGAP45Q92619 1136 aa15.8■□□□□ 0.12
PDE1B-205ENST00000548855 NPATQ14207 1427 aa15.79■□□□□ 0.12
PDE1B-205ENST00000548855 EIF4A2Q14240 407 aaKnown RBP15.79■□□□□ 0.12
PDE1B-205ENST00000548855 MEX3CQ5U5Q3 659 aaKnown RBP15.79■□□□□ 0.12
PDE1B-205ENST00000548855 ABCC1P33527 1531 aa15.79■□□□□ 0.12
PDE1B-205ENST00000548855 BECN2A8MW95 431 aa15.79■□□□□ 0.12
PDE1B-205ENST00000548855 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
PDE1B-205ENST00000548855 KIF1BPQ96EK5 621 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms