RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 KCTD17Q8N5Z5 321 aa9.94□□□□□ -0.82
CCDC38-206ENST00000548771 ITPKCQ96DU7 683 aa9.94□□□□□ -0.82
CCDC38-206ENST00000548771 FKBPLQ9UIM3 349 aa9.94□□□□□ -0.82
CCDC38-206ENST00000548771 MAP4K5Q9Y4K4 846 aa9.94□□□□□ -0.82
CCDC38-206ENST00000548771 AP1G2O75843 785 aa9.93□□□□□ -0.82
CCDC38-206ENST00000548771 NR3C2P08235 984 aa9.93□□□□□ -0.82
CCDC38-206ENST00000548771 NR5A1Q13285 461 aa9.93□□□□□ -0.82
CCDC38-206ENST00000548771 EPS8L1Q8TE68 723 aa9.93□□□□□ -0.82
CCDC38-206ENST00000548771 OCSTAMPQ9BR26 566 aa9.93□□□□□ -0.82
CCDC38-206ENST00000548771 ZC3H4Q9UPT8 1303 aaKnown RBP9.92□□□□□ -0.82
CCDC38-206ENST00000548771 MAN1A2O60476 641 aa9.92□□□□□ -0.82
CCDC38-206ENST00000548771 PPFIA3O75145 1194 aa9.92□□□□□ -0.82
CCDC38-206ENST00000548771 AGERQ15109 404 aa9.92□□□□□ -0.82
CCDC38-206ENST00000548771 HMX1Q9NP08 348 aaPredicted RBP9.92□□□□□ -0.82
CCDC38-206ENST00000548771 USP17L8P0C7I0 530 aa9.91□□□□□ -0.82
CCDC38-206ENST00000548771 ERFEQ4G0M1 354 aa9.91□□□□□ -0.82
CCDC38-206ENST00000548771 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
CCDC38-206ENST00000548771 KCNMA1Q12791 1236 aa9.88□□□□□ -0.83
CCDC38-206ENST00000548771 TMEM259Q4ZIN3 620 aa9.88□□□□□ -0.83
CCDC38-206ENST00000548771 GPR161Q8N6U8 529 aaKnown RBP9.88□□□□□ -0.83
CCDC38-206ENST00000548771 TRIM34Q9BYJ4 488 aa9.88□□□□□ -0.83
CCDC38-206ENST00000548771 ATP1B4Q9UN42 357 aaPredicted RBP9.88□□□□□ -0.83
CCDC38-206ENST00000548771 GPSM3Q9Y4H4 160 aa9.88□□□□□ -0.83
CCDC38-206ENST00000548771 MAGEB6P1A0A0J9YX57 407 aa9.87□□□□□ -0.83
CCDC38-206ENST00000548771 BMP2P12643 396 aa9.87□□□□□ -0.83
CCDC38-206ENST00000548771 KRT76Q01546 638 aa9.87□□□□□ -0.83
CCDC38-206ENST00000548771 ARHGAP9Q9BRR9 750 aa9.86□□□□□ -0.83
CCDC38-206ENST00000548771 DNMT3LQ9UJW3 386 aa9.86□□□□□ -0.83
CCDC38-206ENST00000548771 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
CCDC38-206ENST00000548771 VASH1Q7L8A9 365 aaPredicted RBP9.84□□□□□ -0.83
CCDC38-206ENST00000548771 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
CCDC38-206ENST00000548771 GJD4Q96KN9 370 aaPredicted RBP9.84□□□□□ -0.83
CCDC38-206ENST00000548771 FSHRP23945 695 aa9.83□□□□□ -0.84
CCDC38-206ENST00000548771 CNTNAP3BQ96NU0 1288 aa9.83□□□□□ -0.84
CCDC38-206ENST00000548771 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
CCDC38-206ENST00000548771 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
CCDC38-206ENST00000548771 PTK2Q05397 1052 aa9.82□□□□□ -0.84
CCDC38-206ENST00000548771 MEIOBQ8N635 442 aa9.82□□□□□ -0.84
CCDC38-206ENST00000548771 CCDC116Q8IYX3 515 aa9.81□□□□□ -0.84
CCDC38-206ENST00000548771 ADAM32Q8TC27 787 aa9.81□□□□□ -0.84
CCDC38-206ENST00000548771 CDV3Q9UKY7 258 aaKnown RBP9.81□□□□□ -0.84
CCDC38-206ENST00000548771 RASSF7Q02833 373 aa9.8□□□□□ -0.84
CCDC38-206ENST00000548771 ZBTB33Q86T24 672 aa9.8□□□□□ -0.84
CCDC38-206ENST00000548771 TMEM151AQ8N4L1 468 aa9.8□□□□□ -0.84
CCDC38-206ENST00000548771 KCTD15Q96SI1 283 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-206ENST00000548771 EMILIN1Q9Y6C2 1016 aa9.8□□□□□ -0.84
CCDC38-206ENST00000548771 SOCS7O14512 581 aa9.79□□□□□ -0.84
CCDC38-206ENST00000548771 GDF11O95390 407 aa9.79□□□□□ -0.84
CCDC38-206ENST00000548771 BANK1Q8NDB2 785 aa9.79□□□□□ -0.84
CCDC38-206ENST00000548771 ADAMTS8Q9UP79 889 aa9.79□□□□□ -0.84
CCDC38-206ENST00000548771 FIGNL2A6NMB9 653 aa9.78□□□□□ -0.84
CCDC38-206ENST00000548771 UPP2O95045 317 aa9.78□□□□□ -0.84
CCDC38-206ENST00000548771 GPR37L1O60883 481 aa9.77□□□□□ -0.85
CCDC38-206ENST00000548771 PPP1R26Q5T8A7 1209 aaPredicted RBP9.77□□□□□ -0.85
CCDC38-206ENST00000548771 Q6ZVU0 165 aa9.77□□□□□ -0.85
CCDC38-206ENST00000548771 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
CCDC38-206ENST00000548771 SLC10A4Q96EP9 437 aa9.77□□□□□ -0.85
CCDC38-206ENST00000548771 PTSQ03393 145 aa9.76□□□□□ -0.85
CCDC38-206ENST00000548771 INTS6LQ5JSJ4 861 aaKnown RBP9.76□□□□□ -0.85
CCDC38-206ENST00000548771 RNFT1Q5M7Z0 435 aa9.76□□□□□ -0.85
CCDC38-206ENST00000548771 COL25A1Q9BXS0 654 aaPredicted RBP9.76□□□□□ -0.85
CCDC38-206ENST00000548771 ESPNB1AK53 854 aa9.75□□□□□ -0.85
CCDC38-206ENST00000548771 WHAMMQ8TF30 809 aa9.75□□□□□ -0.85
CCDC38-206ENST00000548771 MTMR14Q8NCE2 650 aa9.74□□□□□ -0.85
CCDC38-206ENST00000548771 TTLL8A6PVC2 850 aa9.73□□□□□ -0.85
CCDC38-206ENST00000548771 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
CCDC38-206ENST00000548771 CBLBQ13191 982 aa9.73□□□□□ -0.85
CCDC38-206ENST00000548771 ZNF385CQ66K41 422 aaPredicted RBP9.73□□□□□ -0.85
CCDC38-206ENST00000548771 ZBBXA8MT70 800 aa9.72□□□□□ -0.85
CCDC38-206ENST00000548771 DHX9Q08211 1270 aaKnown RBP9.72□□□□□ -0.85
CCDC38-206ENST00000548771 TSEN34Q9BSV6 310 aaKnown RBP9.72□□□□□ -0.85
CCDC38-206ENST00000548771 SNRKQ9NRH2 765 aa9.72□□□□□ -0.85
CCDC38-206ENST00000548771 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
CCDC38-206ENST00000548771 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.71□□□□□ -0.86
CCDC38-206ENST00000548771 NBPF20Q3BBV1 942 aa9.71□□□□□ -0.86
CCDC38-206ENST00000548771 FBXO45P0C2W1 286 aa9.7□□□□□ -0.86
CCDC38-206ENST00000548771 DZIP3Q86Y13 1208 aaKnown RBP9.7□□□□□ -0.86
CCDC38-206ENST00000548771 CCDC155Q8N6L0 562 aa9.7□□□□□ -0.86
CCDC38-206ENST00000548771 SVOPQ8N4V2 548 aa9.69□□□□□ -0.86
CCDC38-206ENST00000548771 TMPRSS4Q9NRS4 437 aa9.69□□□□□ -0.86
CCDC38-206ENST00000548771 SPINT1O43278 529 aa9.68□□□□□ -0.86
CCDC38-206ENST00000548771 LILRA1O75019 489 aa9.68□□□□□ -0.86
CCDC38-206ENST00000548771 IRS1P35568 1242 aa9.68□□□□□ -0.86
CCDC38-206ENST00000548771 SEPT12Q8IYM1 358 aa9.68□□□□□ -0.86
CCDC38-206ENST00000548771 VWA5B2Q8N398 1253 aa9.68□□□□□ -0.86
CCDC38-206ENST00000548771 ERVH48-1M5A8F1 160 aa9.67□□□□□ -0.86
CCDC38-206ENST00000548771 GPAT2Q6NUI2 795 aa9.67□□□□□ -0.86
CCDC38-206ENST00000548771 KDF1Q8NAX2 398 aaPredicted RBP9.67□□□□□ -0.86
CCDC38-206ENST00000548771 ADD1P35611 737 aaKnown RBP9.66□□□□□ -0.86
CCDC38-206ENST00000548771 ZNF784Q8NCA9 323 aaPredicted RBP9.66□□□□□ -0.86
CCDC38-206ENST00000548771 NANOS1Q8WY41 292 aaKnown RBP9.66□□□□□ -0.86
CCDC38-206ENST00000548771 SLC35F4A4IF30 521 aa9.65□□□□□ -0.86
CCDC38-206ENST00000548771 NR1H3Q13133 447 aa9.65□□□□□ -0.86
CCDC38-206ENST00000548771 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
CCDC38-206ENST00000548771 NDUFB9Q9Y6M9 179 aa9.65□□□□□ -0.86
CCDC38-206ENST00000548771 CDC14CA4D256 554 aa9.64□□□□□ -0.87
CCDC38-206ENST00000548771 RNF225M0QZC1 329 aaPredicted RBP9.64□□□□□ -0.87
CCDC38-206ENST00000548771 GIGYF1O75420 1035 aaPredicted RBP9.64□□□□□ -0.87
CCDC38-206ENST00000548771 ARHGEF15O94989 841 aa9.64□□□□□ -0.87
CCDC38-206ENST00000548771 CTSOP43234 321 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms