RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 GLI3P10071 1580 aa13.3□□□□□ -0.28
USP15-208ENST00000548524 ONECUT3O60422 494 aaPredicted RBP13.3□□□□□ -0.28
USP15-208ENST00000548524 KCNH5Q8NCM2 988 aa13.3□□□□□ -0.28
USP15-208ENST00000548524 SPATA31A5Q5VU36 1347 aa13.3□□□□□ -0.28
USP15-208ENST00000548524 SPATA31A7Q8IWB4 1347 aa13.3□□□□□ -0.28
USP15-208ENST00000548524 PLCH1Q4KWH8 1693 aa13.3□□□□□ -0.28
USP15-208ENST00000548524 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
USP15-208ENST00000548524 CDCA8Q53HL2 280 aa13.29□□□□□ -0.28
USP15-208ENST00000548524 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
USP15-208ENST00000548524 PHRF1Q9P1Y6 1649 aaKnown RBP13.28□□□□□ -0.28
USP15-208ENST00000548524 KRT27Q7Z3Y8 459 aa13.28□□□□□ -0.28
USP15-208ENST00000548524 USP35Q9P2H5 1018 aa13.28□□□□□ -0.28
USP15-208ENST00000548524 NINLQ9Y2I6 1382 aa13.28□□□□□ -0.28
USP15-208ENST00000548524 CRYBG1Q9Y4K1 1723 aa13.27□□□□□ -0.28
USP15-208ENST00000548524 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
USP15-208ENST00000548524 NME9Q86XW9 330 aa13.27□□□□□ -0.29
USP15-208ENST00000548524 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
USP15-208ENST00000548524 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
USP15-208ENST00000548524 A0A1W2PP64 1363 aa13.27□□□□□ -0.29
USP15-208ENST00000548524 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
USP15-208ENST00000548524 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
USP15-208ENST00000548524 CD163L1Q9NR16 1453 aa13.26□□□□□ -0.29
USP15-208ENST00000548524 NRAPQ86VF7 1730 aa13.25□□□□□ -0.29
USP15-208ENST00000548524 SLIT3O75094 1523 aa13.25□□□□□ -0.29
USP15-208ENST00000548524 USP31Q70CQ4 1352 aa13.25□□□□□ -0.29
USP15-208ENST00000548524 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
USP15-208ENST00000548524 CCDC125Q86Z20 511 aa13.25□□□□□ -0.29
USP15-208ENST00000548524 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
USP15-208ENST00000548524 TCP11L2Q8N4U5 519 aa13.24□□□□□ -0.29
USP15-208ENST00000548524 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
USP15-208ENST00000548524 PIK3C2AO00443 1686 aa13.24□□□□□ -0.29
USP15-208ENST00000548524 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
USP15-208ENST00000548524 CSB-PGBD3P0DP91 1061 aa13.23□□□□□ -0.29
USP15-208ENST00000548524 EIF4G2P78344 907 aaKnown RBP eCLIP13.23□□□□□ -0.293e-6■■■■■ 33.4
USP15-208ENST00000548524 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
USP15-208ENST00000548524 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
USP15-208ENST00000548524 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
USP15-208ENST00000548524 THRAP3Q9Y2W1 955 aaKnown RBP13.23□□□□□ -0.29
USP15-208ENST00000548524 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
USP15-208ENST00000548524 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
USP15-208ENST00000548524 COG3Q96JB2 828 aa13.22□□□□□ -0.29
USP15-208ENST00000548524 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
USP15-208ENST00000548524 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
USP15-208ENST00000548524 COL5A2P05997 1499 aaPredicted RBP13.22□□□□□ -0.29
USP15-208ENST00000548524 PDE3BQ13370 1112 aa13.21□□□□□ -0.29
USP15-208ENST00000548524 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
USP15-208ENST00000548524 FAM182BQ5T319 152 aa13.2□□□□□ -0.3
USP15-208ENST00000548524 BLMP54132 1417 aaPredicted RBP13.2□□□□□ -0.3
USP15-208ENST00000548524 CRB1P82279 1406 aa13.2□□□□□ -0.3
USP15-208ENST00000548524 MON2Q7Z3U7 1717 aa13.19□□□□□ -0.3
USP15-208ENST00000548524 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
USP15-208ENST00000548524 LMO7Q8WWI1 1683 aa13.19□□□□□ -0.3
USP15-208ENST00000548524 NFAT5O94916 1531 aa13.18□□□□□ -0.3
USP15-208ENST00000548524 OVOS2A0A0J9YW53 1432 aa13.17□□□□□ -0.3
USP15-208ENST00000548524 OVOS2Q6IE36 1432 aa13.17□□□□□ -0.3
USP15-208ENST00000548524 CARD10Q9BWT7 1032 aa13.17□□□□□ -0.3
USP15-208ENST00000548524 GGNBP2Q9H3C7 697 aa13.17□□□□□ -0.3
USP15-208ENST00000548524 FYB1O15117 783 aa13.16□□□□□ -0.3
USP15-208ENST00000548524 FAM196AQ6ZSG2 479 aa13.16□□□□□ -0.3
USP15-208ENST00000548524 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
USP15-208ENST00000548524 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
USP15-208ENST00000548524 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
USP15-208ENST00000548524 BAG6P46379 1132 aa13.15□□□□□ -0.3
USP15-208ENST00000548524 AMPHP49418 695 aa13.15□□□□□ -0.3
USP15-208ENST00000548524 DDB1Q16531 1140 aa13.15□□□□□ -0.3
USP15-208ENST00000548524 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
USP15-208ENST00000548524 CDCA7Q9BWT1 371 aaPredicted RBP13.15□□□□□ -0.3
USP15-208ENST00000548524 NLRP2Q9NX02 1062 aa13.15□□□□□ -0.3
USP15-208ENST00000548524 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
USP15-208ENST00000548524 IP6K1Q92551 441 aa13.14□□□□□ -0.31
USP15-208ENST00000548524 ERBB3P21860 1342 aa13.13□□□□□ -0.31
USP15-208ENST00000548524 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
USP15-208ENST00000548524 BRWD3Q6RI45 1802 aa13.13□□□□□ -0.31
USP15-208ENST00000548524 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
USP15-208ENST00000548524 TRIM37O94972 964 aa13.13□□□□□ -0.31
USP15-208ENST00000548524 FBLN1P23142 703 aa13.13□□□□□ -0.31
USP15-208ENST00000548524 LTV1Q96GA3 475 aaPredicted RBP13.13□□□□□ -0.31
USP15-208ENST00000548524 CARD14Q9BXL6 1004 aa13.13□□□□□ -0.31
USP15-208ENST00000548524 ABCC6O95255 1503 aa13.13□□□□□ -0.31
USP15-208ENST00000548524 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
USP15-208ENST00000548524 COL18A1P39060 1754 aa13.12□□□□□ -0.31
USP15-208ENST00000548524 EP400Q96L91 3159 aa13.11□□□□□ -0.31
USP15-208ENST00000548524 C11orf95C9JLR9 678 aaPredicted RBP13.11□□□□□ -0.31
USP15-208ENST00000548524 EXOC5O00471 708 aa13.11□□□□□ -0.31
USP15-208ENST00000548524 HOXC9P31274 260 aa13.11□□□□□ -0.31
USP15-208ENST00000548524 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
USP15-208ENST00000548524 USP54Q70EL1 1684 aa13.11□□□□□ -0.31
USP15-208ENST00000548524 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
USP15-208ENST00000548524 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
USP15-208ENST00000548524 APBA3O96018 575 aa13.1□□□□□ -0.31
USP15-208ENST00000548524 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
USP15-208ENST00000548524 IL2RBP14784 551 aa13.09□□□□□ -0.31
USP15-208ENST00000548524 PANK3Q9H999 370 aa13.09□□□□□ -0.31
USP15-208ENST00000548524 OVOS2A0A0G2JMS6 1433 aa13.08□□□□□ -0.32
USP15-208ENST00000548524 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
USP15-208ENST00000548524 DISP2A7MBM2 1401 aa13.07□□□□□ -0.32
USP15-208ENST00000548524 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
USP15-208ENST00000548524 MARCH10Q8NA82 808 aaPredicted RBP13.07□□□□□ -0.32
USP15-208ENST00000548524 PPM1GO15355 546 aaPredicted RBP13.06□□□□□ -0.32
USP15-208ENST00000548524 EZH2Q15910 746 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms