RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 NBPF14Q5TI25 921 aa8.62□□□□□ -1.03
DEPDC4-205ENST00000548313 ADH1CP00326 375 aa8.61□□□□□ -1.03
DEPDC4-205ENST00000548313 PURBQ96QR8 312 aaKnown RBP8.61□□□□□ -1.03
DEPDC4-205ENST00000548313 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
DEPDC4-205ENST00000548313 VSIG8P0DPA2 414 aa8.6□□□□□ -1.03
DEPDC4-205ENST00000548313 TIMP2P16035 220 aa8.6□□□□□ -1.03
DEPDC4-205ENST00000548313 WDR4P57081 412 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-205ENST00000548313 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
DEPDC4-205ENST00000548313 GPSM3Q9Y4H4 160 aa8.6□□□□□ -1.03
DEPDC4-205ENST00000548313 LOC100996750A0A140TA64 210 aa8.59□□□□□ -1.03
DEPDC4-205ENST00000548313 A6NJR5 290 aa8.59□□□□□ -1.03
DEPDC4-205ENST00000548313 C14orf37Q86TY3 774 aa8.59□□□□□ -1.03
DEPDC4-205ENST00000548313 WWC1Q8IX03 1113 aa8.59□□□□□ -1.03
DEPDC4-205ENST00000548313 FAM174AQ8TBP5 190 aa8.59□□□□□ -1.03
DEPDC4-205ENST00000548313 KRTAP4-6Q9BYQ5 205 aa8.59□□□□□ -1.03
DEPDC4-205ENST00000548313 GDPD2Q9HCC8 539 aa8.59□□□□□ -1.03
DEPDC4-205ENST00000548313 TBC1D2BQ9UPU7 963 aa8.59□□□□□ -1.03
DEPDC4-205ENST00000548313 KLF16Q9BXK1 252 aaPredicted RBP8.57□□□□□ -1.04
DEPDC4-205ENST00000548313 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
DEPDC4-205ENST00000548313 GPR37L1O60883 481 aa8.56□□□□□ -1.04
DEPDC4-205ENST00000548313 PTK2Q05397 1052 aa8.56□□□□□ -1.04
DEPDC4-205ENST00000548313 WASHC4Q2M389 1173 aa8.56□□□□□ -1.04
DEPDC4-205ENST00000548313 BPHLQ86WA6 291 aaPredicted RBP8.56□□□□□ -1.04
DEPDC4-205ENST00000548313 POM121Q96HA1 1249 aa8.56□□□□□ -1.04
DEPDC4-205ENST00000548313 CDK15Q96Q40 435 aa8.56□□□□□ -1.04
DEPDC4-205ENST00000548313 MAN1A2O60476 641 aa8.55□□□□□ -1.04
DEPDC4-205ENST00000548313 ABL2P42684 1182 aa8.55□□□□□ -1.04
DEPDC4-205ENST00000548313 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
DEPDC4-205ENST00000548313 SOBPA7XYQ1 873 aa8.54□□□□□ -1.04
DEPDC4-205ENST00000548313 SH3BP5LQ7L8J4 393 aa8.54□□□□□ -1.04
DEPDC4-205ENST00000548313 ZBBXA8MT70 800 aa8.53□□□□□ -1.04
DEPDC4-205ENST00000548313 UPP2O95045 317 aa8.53□□□□□ -1.04
DEPDC4-205ENST00000548313 KCNMA1Q12791 1236 aa8.53□□□□□ -1.04
DEPDC4-205ENST00000548313 NR5A1Q13285 461 aa8.53□□□□□ -1.04
DEPDC4-205ENST00000548313 IRF5Q13568 498 aa8.53□□□□□ -1.04
DEPDC4-205ENST00000548313 SH3RF1Q7Z6J0 888 aa8.53□□□□□ -1.04
DEPDC4-205ENST00000548313 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-205ENST00000548313 ZIC2O95409 532 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-205ENST00000548313 NR1H3Q13133 447 aa8.52□□□□□ -1.05
DEPDC4-205ENST00000548313 ARID5BQ14865 1188 aa8.52□□□□□ -1.05
DEPDC4-205ENST00000548313 AGERQ15109 404 aa8.52□□□□□ -1.05
DEPDC4-205ENST00000548313 FNBP4Q8N3X1 1017 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-205ENST00000548313 ZNF592Q92610 1267 aa8.52□□□□□ -1.05
DEPDC4-205ENST00000548313 ARHGAP9Q9BRR9 750 aa8.52□□□□□ -1.05
DEPDC4-205ENST00000548313 ZNF330Q9Y3S2 320 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-205ENST00000548313 FOXJ1Q92949 421 aa8.51□□□□□ -1.05
DEPDC4-205ENST00000548313 PPFIA3O75145 1194 aa8.5□□□□□ -1.05
DEPDC4-205ENST00000548313 FBXO45P0C2W1 286 aa8.5□□□□□ -1.05
DEPDC4-205ENST00000548313 MCCD1P59942 119 aaPredicted RBP8.5□□□□□ -1.05
DEPDC4-205ENST00000548313 SUZ12Q15022 739 aaKnown RBP8.5□□□□□ -1.05
DEPDC4-205ENST00000548313 C6orf118Q5T5N4 469 aa8.5□□□□□ -1.05
DEPDC4-205ENST00000548313 ZBTB33Q86T24 672 aa8.5□□□□□ -1.05
DEPDC4-205ENST00000548313 ITPKCQ96DU7 683 aa8.5□□□□□ -1.05
DEPDC4-205ENST00000548313 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
DEPDC4-205ENST00000548313 TIMELESSQ9UNS1 1208 aa8.5□□□□□ -1.05
DEPDC4-205ENST00000548313 TRAK2O60296 914 aa8.49□□□□□ -1.05
DEPDC4-205ENST00000548313 BMP2P12643 396 aa8.49□□□□□ -1.05
DEPDC4-205ENST00000548313 SOX11P35716 441 aa8.48□□□□□ -1.05
DEPDC4-205ENST00000548313 EIF4G2P78344 907 aaKnown RBP eCLIP8.48□□□□□ -1.05
DEPDC4-205ENST00000548313 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
DEPDC4-205ENST00000548313 ADAM32Q8TC27 787 aa8.48□□□□□ -1.05
DEPDC4-205ENST00000548313 OCSTAMPQ9BR26 566 aa8.48□□□□□ -1.05
DEPDC4-205ENST00000548313 C1QTNF2Q9BXJ5 285 aa8.48□□□□□ -1.05
DEPDC4-205ENST00000548313 MAGEB6P1A0A0J9YX57 407 aa8.47□□□□□ -1.05
DEPDC4-205ENST00000548313 TRMT44Q8IYL2 757 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-205ENST00000548313 LINC00528Q8N1L1 170 aa8.47□□□□□ -1.05
DEPDC4-205ENST00000548313 CDV3Q9UKY7 258 aaKnown RBP8.47□□□□□ -1.05
DEPDC4-205ENST00000548313 GRM5P41594 1212 aa8.46□□□□□ -1.06
DEPDC4-205ENST00000548313 VAC14Q08AM6 782 aa8.46□□□□□ -1.06
DEPDC4-205ENST00000548313 ERFEQ4G0M1 354 aa8.46□□□□□ -1.06
DEPDC4-205ENST00000548313 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.06
DEPDC4-205ENST00000548313 CARD14Q9BXL6 1004 aa8.46□□□□□ -1.06
DEPDC4-205ENST00000548313 RNF225M0QZC1 329 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-205ENST00000548313 NR3C2P08235 984 aa8.45□□□□□ -1.06
DEPDC4-205ENST00000548313 TMEM151AQ8N4L1 468 aa8.45□□□□□ -1.06
DEPDC4-205ENST00000548313 MEIOBQ8N635 442 aa8.45□□□□□ -1.06
DEPDC4-205ENST00000548313 SOS2Q07890 1332 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-205ENST00000548313 GSK3AP49840 483 aa8.44□□□□□ -1.06
DEPDC4-205ENST00000548313 DZIP3Q86Y13 1208 aaKnown RBP8.44□□□□□ -1.06
DEPDC4-205ENST00000548313 SLC10A4Q96EP9 437 aa8.44□□□□□ -1.06
DEPDC4-205ENST00000548313 TSEN34Q9BSV6 310 aaKnown RBP8.44□□□□□ -1.06
DEPDC4-205ENST00000548313 MAP4K5Q9Y4K4 846 aa8.44□□□□□ -1.06
DEPDC4-205ENST00000548313 SEMA3FQ13275 785 aa8.43□□□□□ -1.06
DEPDC4-205ENST00000548313 PCDHB9Q9Y5E1 797 aa8.43□□□□□ -1.06
DEPDC4-205ENST00000548313 GDF11O95390 407 aa8.42□□□□□ -1.06
DEPDC4-205ENST00000548313 RASSF7Q02833 373 aa8.42□□□□□ -1.06
DEPDC4-205ENST00000548313 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.42□□□□□ -1.06
DEPDC4-205ENST00000548313 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
DEPDC4-205ENST00000548313 NBPF20Q3BBV1 942 aa8.41□□□□□ -1.06
DEPDC4-205ENST00000548313 CCDC125Q86Z20 511 aa8.41□□□□□ -1.06
DEPDC4-205ENST00000548313 ALG2Q9H553 416 aa8.41□□□□□ -1.06
DEPDC4-205ENST00000548313 EMILIN1Q9Y6C2 1016 aa8.41□□□□□ -1.06
DEPDC4-205ENST00000548313 POM121CA8CG34 1229 aa8.4□□□□□ -1.06
DEPDC4-205ENST00000548313 ZNF777Q9ULD5 760 aaPredicted RBP8.4□□□□□ -1.06
DEPDC4-205ENST00000548313 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
DEPDC4-205ENST00000548313 FSHRP23945 695 aa8.39□□□□□ -1.07
DEPDC4-205ENST00000548313 HDGFL1Q5TGJ6 251 aa8.39□□□□□ -1.07
DEPDC4-205ENST00000548313 VASH1Q7L8A9 365 aaPredicted RBP8.39□□□□□ -1.07
DEPDC4-205ENST00000548313 CNTNAP3BQ96NU0 1288 aa8.39□□□□□ -1.07
DEPDC4-205ENST00000548313 CNTNAP3Q9BZ76 1288 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms