RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 ZNF521Q96K83 1311 aa16.27■□□□□ 0.2
RAB5B-204ENST00000548068 CCDC27Q2M243 656 aa16.27■□□□□ 0.2
RAB5B-204ENST00000548068 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
RAB5B-204ENST00000548068 ABCC6O95255 1503 aa16.27■□□□□ 0.2
RAB5B-204ENST00000548068 SPATA31A3Q5VYP0 1347 aa16.26■□□□□ 0.19
RAB5B-204ENST00000548068 HOXC9P31274 260 aa16.26■□□□□ 0.19
RAB5B-204ENST00000548068 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
RAB5B-204ENST00000548068 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
RAB5B-204ENST00000548068 SENP3-EIF4A1A0A087X0R7 540 aa16.25■□□□□ 0.19
RAB5B-204ENST00000548068 GCP02774 474 aa16.25■□□□□ 0.19
RAB5B-204ENST00000548068 NEFLP07196 543 aa16.25■□□□□ 0.19
RAB5B-204ENST00000548068 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
RAB5B-204ENST00000548068 SOS2Q07890 1332 aaPredicted RBP16.24■□□□□ 0.19
RAB5B-204ENST00000548068 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
RAB5B-204ENST00000548068 IP6K1Q92551 441 aa16.24■□□□□ 0.19
RAB5B-204ENST00000548068 GTF3C3Q9Y5Q9 886 aa16.24■□□□□ 0.19
RAB5B-204ENST00000548068 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
RAB5B-204ENST00000548068 AHDC1Q5TGY3 1603 aaPredicted RBP16.23■□□□□ 0.19
RAB5B-204ENST00000548068 E9PSI1 815 aa16.22■□□□□ 0.19
RAB5B-204ENST00000548068 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
RAB5B-204ENST00000548068 WDR63Q8IWG1 891 aa16.22■□□□□ 0.19
RAB5B-204ENST00000548068 WWC1Q8IX03 1113 aa16.22■□□□□ 0.19
RAB5B-204ENST00000548068 DDX17Q92841 729 aaKnown RBP16.22■□□□□ 0.19
RAB5B-204ENST00000548068 IGSF1Q8N6C5 1336 aa16.21■□□□□ 0.19
RAB5B-204ENST00000548068 HMOX1P09601 288 aa16.21■□□□□ 0.19
RAB5B-204ENST00000548068 ARHGEF25Q86VW2 580 aa16.21■□□□□ 0.19
RAB5B-204ENST00000548068 ABCA3Q99758 1704 aa16.21■□□□□ 0.19
RAB5B-204ENST00000548068 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.18
RAB5B-204ENST00000548068 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
RAB5B-204ENST00000548068 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
RAB5B-204ENST00000548068 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
RAB5B-204ENST00000548068 KDRP35968 1356 aa16.2■□□□□ 0.18
RAB5B-204ENST00000548068 SLFN5Q08AF3 891 aa16.19■□□□□ 0.18
RAB5B-204ENST00000548068 SULT6B1Q6IMI4 303 aa16.19■□□□□ 0.18
RAB5B-204ENST00000548068 RRP7AQ9Y3A4 280 aaKnown RBP16.19■□□□□ 0.18
RAB5B-204ENST00000548068 DLG5Q8TDM6 1919 aa16.19■□□□□ 0.18
RAB5B-204ENST00000548068 CAMTA1Q9Y6Y1 1673 aa16.18■□□□□ 0.18
RAB5B-204ENST00000548068 CPDO75976 1380 aa16.18■□□□□ 0.18
RAB5B-204ENST00000548068 CALD1Q05682 793 aaKnown RBP16.18■□□□□ 0.18
RAB5B-204ENST00000548068 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
RAB5B-204ENST00000548068 IL16Q14005 1332 aa16.18■□□□□ 0.18
RAB5B-204ENST00000548068 ZBTB7CA1YPR0 619 aa16.17■□□□□ 0.18
RAB5B-204ENST00000548068 RIPK4P57078 832 aa16.17■□□□□ 0.18
RAB5B-204ENST00000548068 SUPT16HQ9Y5B9 1047 aaKnown RBP16.17■□□□□ 0.18
RAB5B-204ENST00000548068 COL18A1P39060 1754 aa16.16■□□□□ 0.18
RAB5B-204ENST00000548068 DUSP27Q5VZP5 1158 aa16.16■□□□□ 0.18
RAB5B-204ENST00000548068 TRMT2AQ8IZ69 625 aaKnown RBP16.16■□□□□ 0.18
RAB5B-204ENST00000548068 EYA1Q99502 592 aa16.16■□□□□ 0.18
RAB5B-204ENST00000548068 MYH16Q9H6N6 1097 aa16.16■□□□□ 0.18
RAB5B-204ENST00000548068 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
RAB5B-204ENST00000548068 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
RAB5B-204ENST00000548068 TOM1O60784 492 aa16.14■□□□□ 0.17
RAB5B-204ENST00000548068 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
RAB5B-204ENST00000548068 PHACTR3Q96KR7 559 aa16.14■□□□□ 0.17
RAB5B-204ENST00000548068 RCAN3Q9UKA8 241 aa16.14■□□□□ 0.17
RAB5B-204ENST00000548068 COL22A1Q8NFW1 1626 aaPredicted RBP16.14■□□□□ 0.17
RAB5B-204ENST00000548068 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
RAB5B-204ENST00000548068 NCAPD2Q15021 1401 aa16.13■□□□□ 0.17
RAB5B-204ENST00000548068 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
RAB5B-204ENST00000548068 HAP1P54257 671 aaPredicted RBP16.13■□□□□ 0.17
RAB5B-204ENST00000548068 ZC3H6P61129 1189 aaKnown RBP16.13■□□□□ 0.17
RAB5B-204ENST00000548068 LRRC59Q96AG4 307 aaKnown RBP16.13■□□□□ 0.17
RAB5B-204ENST00000548068 LTV1Q96GA3 475 aaPredicted RBP16.13■□□□□ 0.17
RAB5B-204ENST00000548068 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
RAB5B-204ENST00000548068 LMO7Q8WWI1 1683 aa16.12■□□□□ 0.17
RAB5B-204ENST00000548068 GAS2L2Q8NHY3 880 aa16.12■□□□□ 0.17
RAB5B-204ENST00000548068 ANKRD24Q8TF21 1146 aa16.12■□□□□ 0.17
RAB5B-204ENST00000548068 RNF123Q5XPI4 1314 aa16.11■□□□□ 0.17
RAB5B-204ENST00000548068 KIAA0232Q92628 1395 aa16.11■□□□□ 0.17
RAB5B-204ENST00000548068 PLEKHG2Q9H7P9 1386 aa16.11■□□□□ 0.17
RAB5B-204ENST00000548068 COL16A1Q07092 1604 aaPredicted RBP16.1■□□□□ 0.17
RAB5B-204ENST00000548068 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
RAB5B-204ENST00000548068 CABLES1Q8TDN4 633 aa16.1■□□□□ 0.17
RAB5B-204ENST00000548068 ERBB3P21860 1342 aa16.1■□□□□ 0.17
RAB5B-204ENST00000548068 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
RAB5B-204ENST00000548068 CT47B1P0C2W7 299 aaPredicted RBP16.08■□□□□ 0.16
RAB5B-204ENST00000548068 FKBP8Q14318 412 aa16.08■□□□□ 0.16
RAB5B-204ENST00000548068 PRDM11Q9NQV5 511 aa16.08■□□□□ 0.16
RAB5B-204ENST00000548068 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
RAB5B-204ENST00000548068 GNAI1P63096 354 aa16.07■□□□□ 0.16
RAB5B-204ENST00000548068 NBPF6Q5VWK0 638 aa16.07■□□□□ 0.16
RAB5B-204ENST00000548068 NBPF4Q96M43 638 aa16.07■□□□□ 0.16
RAB5B-204ENST00000548068 COL14A1Q05707 1796 aaKnown RBP16.06■□□□□ 0.16
RAB5B-204ENST00000548068 LRRC37A3O60309 1634 aa16.06■□□□□ 0.16
RAB5B-204ENST00000548068 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.06■□□□□ 0.16
RAB5B-204ENST00000548068 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
RAB5B-204ENST00000548068 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
RAB5B-204ENST00000548068 AXIN2Q9Y2T1 843 aa16.06■□□□□ 0.16
RAB5B-204ENST00000548068 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
RAB5B-204ENST00000548068 RRP1P56182 461 aaKnown RBP16.05■□□□□ 0.16
RAB5B-204ENST00000548068 AMOTQ4VCS5 1084 aa16.05■□□□□ 0.16
RAB5B-204ENST00000548068 MAP3K5Q99683 1374 aa16.04■□□□□ 0.16
RAB5B-204ENST00000548068 UBAP1LF5GYI3 381 aa16.04■□□□□ 0.16
RAB5B-204ENST00000548068 CSB-PGBD3P0DP91 1061 aa16.04■□□□□ 0.16
RAB5B-204ENST00000548068 MTHFSDQ2M296 383 aaKnown RBP16.04■□□□□ 0.16
RAB5B-204ENST00000548068 USHBP1Q8N6Y0 703 aa16.04■□□□□ 0.16
RAB5B-204ENST00000548068 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
RAB5B-204ENST00000548068 CHRNA2Q15822 529 aa16.03■□□□□ 0.16
RAB5B-204ENST00000548068 PLEKHO1Q53GL0 409 aaPredicted RBP16.03■□□□□ 0.16
RAB5B-204ENST00000548068 NLRP2Q9NX02 1062 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms