RNA–Protein interactions for RNA: ENST00000547273.1

PPFIA2-208, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 371 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-208ENST00000547273 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
PPFIA2-208ENST00000547273 NPC1L1Q9UHC9 1359 aa11.08□□□□□ -0.64
PPFIA2-208ENST00000547273 TNS3Q68CZ2 1445 aa11.08□□□□□ -0.64
PPFIA2-208ENST00000547273 UBAP1LF5GYI3 381 aa11.07□□□□□ -0.64
PPFIA2-208ENST00000547273 OVOS2A0A0J9YW53 1432 aa11.07□□□□□ -0.64
PPFIA2-208ENST00000547273 OVOS2Q6IE36 1432 aa11.07□□□□□ -0.64
PPFIA2-208ENST00000547273 CGNL1Q0VF96 1302 aa11.07□□□□□ -0.64
PPFIA2-208ENST00000547273 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
PPFIA2-208ENST00000547273 COL22A1Q8NFW1 1626 aaPredicted RBP11.06□□□□□ -0.64
PPFIA2-208ENST00000547273 SBNO1A3KN83 1393 aa11.06□□□□□ -0.64
PPFIA2-208ENST00000547273 SHPRHQ149N8 1683 aa11.06□□□□□ -0.64
PPFIA2-208ENST00000547273 GALR2O43603 387 aaPredicted RBP11.06□□□□□ -0.64
PPFIA2-208ENST00000547273 CARD14Q9BXL6 1004 aa11.06□□□□□ -0.64
PPFIA2-208ENST00000547273 KNSTRNQ9Y448 316 aa11.06□□□□□ -0.64
PPFIA2-208ENST00000547273 FOXO3O43524 673 aa11.05□□□□□ -0.64
PPFIA2-208ENST00000547273 TTC21BQ7Z4L5 1316 aa11.05□□□□□ -0.64
PPFIA2-208ENST00000547273 SLIT3O75094 1523 aa11.04□□□□□ -0.64
PPFIA2-208ENST00000547273 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-208ENST00000547273 TIE1P35590 1138 aa11.04□□□□□ -0.64
PPFIA2-208ENST00000547273 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
PPFIA2-208ENST00000547273 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
PPFIA2-208ENST00000547273 SOS2Q07890 1332 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-208ENST00000547273 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
PPFIA2-208ENST00000547273 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
PPFIA2-208ENST00000547273 PSME1Q06323 249 aa11.03□□□□□ -0.64
PPFIA2-208ENST00000547273 LTN1O94822 1766 aa11.03□□□□□ -0.64
PPFIA2-208ENST00000547273 PARD3Q8TEW0 1356 aa11.03□□□□□ -0.64
PPFIA2-208ENST00000547273 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-208ENST00000547273 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
PPFIA2-208ENST00000547273 DIEXFQ68CQ4 756 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-208ENST00000547273 KRT28Q7Z3Y7 464 aa11.02□□□□□ -0.65
PPFIA2-208ENST00000547273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.02□□□□□ -0.65
PPFIA2-208ENST00000547273 NFAT5O94916 1531 aa11.02□□□□□ -0.65
PPFIA2-208ENST00000547273 XPCQ01831 940 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-208ENST00000547273 PDAP1Q13442 181 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-208ENST00000547273 DDX17Q92841 729 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-208ENST00000547273 SPATA31A3Q5VYP0 1347 aa11.01□□□□□ -0.65
PPFIA2-208ENST00000547273 MAP2P11137 1827 aaKnown RBP11□□□□□ -0.65
PPFIA2-208ENST00000547273 NME9Q86XW9 330 aa11□□□□□ -0.65
PPFIA2-208ENST00000547273 USP19O94966 1318 aa11□□□□□ -0.65
PPFIA2-208ENST00000547273 ABCC6O95255 1503 aa10.99□□□□□ -0.65
PPFIA2-208ENST00000547273 FYB1O15117 783 aa10.99□□□□□ -0.65
PPFIA2-208ENST00000547273 SMG6Q86US8 1419 aaKnown RBP10.99□□□□□ -0.65
PPFIA2-208ENST00000547273 ANP32CO43423 234 aa10.98□□□□□ -0.65
PPFIA2-208ENST00000547273 CC2D1BQ5T0F9 858 aaKnown RBP10.98□□□□□ -0.65
PPFIA2-208ENST00000547273 COG3Q96JB2 828 aa10.98□□□□□ -0.65
PPFIA2-208ENST00000547273 GGNBP2Q9H3C7 697 aa10.98□□□□□ -0.65
PPFIA2-208ENST00000547273 PCDHB8Q9UN66 801 aa10.98□□□□□ -0.65
PPFIA2-208ENST00000547273 PNPLA6Q8IY17 1366 aa10.98□□□□□ -0.65
PPFIA2-208ENST00000547273 RALBP1Q15311 655 aa10.97□□□□□ -0.65
PPFIA2-208ENST00000547273 ABTB2Q8N961 1025 aa10.97□□□□□ -0.65
PPFIA2-208ENST00000547273 PRKRIP1Q9H875 184 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-208ENST00000547273 AATKQ6ZMQ8 1374 aa10.97□□□□□ -0.65
PPFIA2-208ENST00000547273 CDK12Q9NYV4 1490 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-208ENST00000547273 PEAK1Q9H792 1746 aa10.97□□□□□ -0.65
PPFIA2-208ENST00000547273 NLRP6P59044 892 aa10.96□□□□□ -0.65
PPFIA2-208ENST00000547273 ASTLQ6HA08 431 aaPredicted RBP10.96□□□□□ -0.65
PPFIA2-208ENST00000547273 MORC1Q86VD1 984 aa10.96□□□□□ -0.65
PPFIA2-208ENST00000547273 NLRP13Q86W25 1043 aa10.96□□□□□ -0.65
PPFIA2-208ENST00000547273 FAM208AQ9UK61 1670 aaKnown RBP10.95□□□□□ -0.66
PPFIA2-208ENST00000547273 MYBBP1AQ9BQG0 1328 aaKnown RBP10.95□□□□□ -0.66
PPFIA2-208ENST00000547273 PSEN1P49768 467 aa10.95□□□□□ -0.66
PPFIA2-208ENST00000547273 LMOD2Q6P5Q4 547 aa10.95□□□□□ -0.66
PPFIA2-208ENST00000547273 LRRC59Q96AG4 307 aaKnown RBP10.95□□□□□ -0.66
PPFIA2-208ENST00000547273 PLCH1Q4KWH8 1693 aa10.95□□□□□ -0.66
PPFIA2-208ENST00000547273 LMO7Q8WWI1 1683 aa10.95□□□□□ -0.66
PPFIA2-208ENST00000547273 RTL1A6NKG5 1358 aa10.94□□□□□ -0.66
PPFIA2-208ENST00000547273 JCADQ9P266 1359 aa10.94□□□□□ -0.66
PPFIA2-208ENST00000547273 CNGB1Q14028 1251 aaPredicted RBP10.94□□□□□ -0.66
PPFIA2-208ENST00000547273 RNF25Q96BH1 459 aaPredicted RBP10.94□□□□□ -0.66
PPFIA2-208ENST00000547273 COL18A1P39060 1754 aa10.94□□□□□ -0.66
PPFIA2-208ENST00000547273 COL14A1Q05707 1796 aaKnown RBP10.94□□□□□ -0.66
PPFIA2-208ENST00000547273 KIF24Q5T7B8 1368 aa10.93□□□□□ -0.66
PPFIA2-208ENST00000547273 NUTM2GQ5VZR2 741 aa10.93□□□□□ -0.66
PPFIA2-208ENST00000547273 KCNH5Q8NCM2 988 aa10.93□□□□□ -0.66
PPFIA2-208ENST00000547273 TMEM106CQ9BVX2 250 aa10.93□□□□□ -0.66
PPFIA2-208ENST00000547273 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
PPFIA2-208ENST00000547273 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
PPFIA2-208ENST00000547273 COL3A1P02461 1466 aaPredicted RBP10.93□□□□□ -0.66
PPFIA2-208ENST00000547273 RGPD5Q99666 1765 aa10.93□□□□□ -0.66
PPFIA2-208ENST00000547273 NWD2Q9ULI1 1742 aa10.92□□□□□ -0.66
PPFIA2-208ENST00000547273 CPDO75976 1380 aa10.92□□□□□ -0.66
PPFIA2-208ENST00000547273 RGL2O15211 777 aa10.92□□□□□ -0.66
PPFIA2-208ENST00000547273 ATMINO43313 823 aaPredicted RBP10.92□□□□□ -0.66
PPFIA2-208ENST00000547273 CAMTA1Q9Y6Y1 1673 aa10.92□□□□□ -0.66
PPFIA2-208ENST00000547273 TTLL13PA6NNM8 815 aa10.91□□□□□ -0.66
PPFIA2-208ENST00000547273 PPP2R1AP30153 589 aa10.91□□□□□ -0.66
PPFIA2-208ENST00000547273 HSPA1LP34931 641 aa10.91□□□□□ -0.66
PPFIA2-208ENST00000547273 FBXO41Q8TF61 875 aa10.91□□□□□ -0.66
PPFIA2-208ENST00000547273 RGPD1P0DJD0 1748 aa10.91□□□□□ -0.66
PPFIA2-208ENST00000547273 NRAPQ86VF7 1730 aa10.91□□□□□ -0.66
PPFIA2-208ENST00000547273 FLT4P35916 1363 aa10.9□□□□□ -0.66
PPFIA2-208ENST00000547273 GCP02774 474 aa10.9□□□□□ -0.66
PPFIA2-208ENST00000547273 TNNT2P45379 298 aaPredicted RBP10.9□□□□□ -0.66
PPFIA2-208ENST00000547273 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
PPFIA2-208ENST00000547273 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.89□□□□□ -0.67
PPFIA2-208ENST00000547273 MAP3K19Q56UN5 1328 aa10.89□□□□□ -0.67
PPFIA2-208ENST00000547273 SPATA31A6Q5VVP1 1343 aa10.89□□□□□ -0.67
PPFIA2-208ENST00000547273 LRP6O75581 1613 aa10.89□□□□□ -0.67
PPFIA2-208ENST00000547273 SOX12O15370 315 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms