RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 ZNF592Q92610 1267 aa12.39□□□□□ -0.43
CPNE8-204ENST00000546603 WDR4P57081 412 aaKnown RBP12.38□□□□□ -0.43
CPNE8-204ENST00000546603 MCCD1P59942 119 aaPredicted RBP12.37□□□□□ -0.43
CPNE8-204ENST00000546603 CCDC116Q8IYX3 515 aa12.37□□□□□ -0.43
CPNE8-204ENST00000546603 KLF16Q9BXK1 252 aaPredicted RBP12.37□□□□□ -0.43
CPNE8-204ENST00000546603 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
CPNE8-204ENST00000546603 PCDHB9Q9Y5E1 797 aa12.36□□□□□ -0.43
CPNE8-204ENST00000546603 EMILIN1Q9Y6C2 1016 aa12.36□□□□□ -0.43
CPNE8-204ENST00000546603 TIMP2P16035 220 aa12.35□□□□□ -0.43
CPNE8-204ENST00000546603 DHX9Q08211 1270 aaKnown RBP12.35□□□□□ -0.43
CPNE8-204ENST00000546603 DACH1Q9UI36 760 aa12.35□□□□□ -0.43
CPNE8-204ENST00000546603 ZIC2O95409 532 aaPredicted RBP12.34□□□□□ -0.43
CPNE8-204ENST00000546603 ATP13A2Q9NQ11 1180 aa12.34□□□□□ -0.43
CPNE8-204ENST00000546603 ABL2P42684 1182 aa12.33□□□□□ -0.44
CPNE8-204ENST00000546603 ZNF787Q6DD87 383 aa12.33□□□□□ -0.44
CPNE8-204ENST00000546603 ITPKCQ96DU7 683 aa12.33□□□□□ -0.44
CPNE8-204ENST00000546603 IRF5Q13568 498 aa12.32□□□□□ -0.44
CPNE8-204ENST00000546603 INTS6LQ5JSJ4 861 aaKnown RBP12.32□□□□□ -0.44
CPNE8-204ENST00000546603 PGPEP1Q9NXJ5 209 aa12.32□□□□□ -0.44
CPNE8-204ENST00000546603 ESPNB1AK53 854 aa12.31□□□□□ -0.44
CPNE8-204ENST00000546603 PPP1R26Q5T8A7 1209 aaPredicted RBP12.31□□□□□ -0.44
CPNE8-204ENST00000546603 SEPT12Q8IYM1 358 aa12.31□□□□□ -0.44
CPNE8-204ENST00000546603 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
CPNE8-204ENST00000546603 RAD21O60216 631 aa12.3□□□□□ -0.44
CPNE8-204ENST00000546603 WASHC4Q2M389 1173 aa12.3□□□□□ -0.44
CPNE8-204ENST00000546603 ZFAND3Q9H8U3 227 aa12.3□□□□□ -0.44
CPNE8-204ENST00000546603 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
CPNE8-204ENST00000546603 EIF4G2P78344 907 aaKnown RBP eCLIP12.29□□□□□ -0.44
CPNE8-204ENST00000546603 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
CPNE8-204ENST00000546603 SENP2Q9HC62 589 aa12.29□□□□□ -0.44
CPNE8-204ENST00000546603 WWC1Q8IX03 1113 aa12.28□□□□□ -0.44
CPNE8-204ENST00000546603 TRIM52Q96A61 297 aa12.28□□□□□ -0.44
CPNE8-204ENST00000546603 GMPR2Q9P2T1 348 aaKnown RBP12.28□□□□□ -0.44
CPNE8-204ENST00000546603 GIGYF1O75420 1035 aaPredicted RBP12.27□□□□□ -0.45
CPNE8-204ENST00000546603 RAB15P59190 212 aa12.27□□□□□ -0.45
CPNE8-204ENST00000546603 RNF20Q5VTR2 975 aa12.27□□□□□ -0.45
CPNE8-204ENST00000546603 POTECB2RU33 542 aa12.26□□□□□ -0.45
CPNE8-204ENST00000546603 BMP1P13497 986 aa12.26□□□□□ -0.45
CPNE8-204ENST00000546603 TRIM46Q7Z4K8 759 aa12.26□□□□□ -0.45
CPNE8-204ENST00000546603 SCARF1Q14162 830 aa12.25□□□□□ -0.45
CPNE8-204ENST00000546603 MRPL14Q6P1L8 145 aaKnown RBP12.25□□□□□ -0.45
CPNE8-204ENST00000546603 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
CPNE8-204ENST00000546603 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
CPNE8-204ENST00000546603 ERVH48-1M5A8F1 160 aa12.24□□□□□ -0.45
CPNE8-204ENST00000546603 UPP2O95045 317 aa12.24□□□□□ -0.45
CPNE8-204ENST00000546603 VAC14Q08AM6 782 aa12.24□□□□□ -0.45
CPNE8-204ENST00000546603 MEIOBQ8N635 442 aa12.23□□□□□ -0.45
CPNE8-204ENST00000546603 POM121Q96HA1 1249 aa12.23□□□□□ -0.45
CPNE8-204ENST00000546603 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
CPNE8-204ENST00000546603 TMPRSS4Q9NRS4 437 aa12.22□□□□□ -0.45
CPNE8-204ENST00000546603 CEP126Q9P2H0 1117 aa12.22□□□□□ -0.45
CPNE8-204ENST00000546603 SOX11P35716 441 aa12.21□□□□□ -0.45
CPNE8-204ENST00000546603 Q6ZVU0 165 aa12.21□□□□□ -0.45
CPNE8-204ENST00000546603 TSEN34Q9BSV6 310 aaKnown RBP12.21□□□□□ -0.45
CPNE8-204ENST00000546603 ZNF784Q8NCA9 323 aaPredicted RBP12.2□□□□□ -0.46
CPNE8-204ENST00000546603 ZFP42Q96MM3 310 aa12.2□□□□□ -0.46
CPNE8-204ENST00000546603 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
CPNE8-204ENST00000546603 CBLBQ13191 982 aa12.18□□□□□ -0.46
CPNE8-204ENST00000546603 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
CPNE8-204ENST00000546603 LINC00528Q8N1L1 170 aa12.18□□□□□ -0.46
CPNE8-204ENST00000546603 BMP2P12643 396 aa12.17□□□□□ -0.46
CPNE8-204ENST00000546603 LILRA1O75019 489 aa12.16□□□□□ -0.46
CPNE8-204ENST00000546603 SNRPBP14678 240 aaKnown RBP12.16□□□□□ -0.46
CPNE8-204ENST00000546603 C6orf118Q5T5N4 469 aa12.16□□□□□ -0.46
CPNE8-204ENST00000546603 SLFNL1Q499Z3 407 aa12.15□□□□□ -0.46
CPNE8-204ENST00000546603 CYLDQ9NQC7 956 aa12.15□□□□□ -0.46
CPNE8-204ENST00000546603 PCDHB11Q9Y5F2 797 aa12.15□□□□□ -0.46
CPNE8-204ENST00000546603 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
CPNE8-204ENST00000546603 CLUAP1Q96AJ1 413 aa12.13□□□□□ -0.47
CPNE8-204ENST00000546603 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
CPNE8-204ENST00000546603 ADH1AP07327 375 aa12.12□□□□□ -0.47
CPNE8-204ENST00000546603 ERVK-9P63128 1117 aa12.12□□□□□ -0.47
CPNE8-204ENST00000546603 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
CPNE8-204ENST00000546603 PHTF2Q8N3S3 785 aa12.12□□□□□ -0.47
CPNE8-204ENST00000546603 RNF135Q8IUD6 432 aa12.11□□□□□ -0.47
CPNE8-204ENST00000546603 AGBL1Q96MI9 1066 aa12.11□□□□□ -0.47
CPNE8-204ENST00000546603 SPINT1O43278 529 aa12.1□□□□□ -0.47
CPNE8-204ENST00000546603 RELBQ01201 579 aa12.1□□□□□ -0.47
CPNE8-204ENST00000546603 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
CPNE8-204ENST00000546603 ALG2Q9H553 416 aa12.1□□□□□ -0.47
CPNE8-204ENST00000546603 A6NJR5 290 aa12.09□□□□□ -0.47
CPNE8-204ENST00000546603 PROSER2Q86WR7 435 aaPredicted RBP12.09□□□□□ -0.47
CPNE8-204ENST00000546603 PTGIRP43119 386 aa12.08□□□□□ -0.48
CPNE8-204ENST00000546603 MAN1A2O60476 641 aa12.07□□□□□ -0.48
CPNE8-204ENST00000546603 MYCP01106 439 aaPredicted RBP12.07□□□□□ -0.48
CPNE8-204ENST00000546603 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
CPNE8-204ENST00000546603 CHIC2Q9UKJ5 165 aa12.07□□□□□ -0.48
CPNE8-204ENST00000546603 DOLKQ9UPQ8 538 aa12.07□□□□□ -0.48
CPNE8-204ENST00000546603 SOS2Q07890 1332 aaPredicted RBP12.07□□□□□ -0.48
CPNE8-204ENST00000546603 TTLL8A6PVC2 850 aa12.06□□□□□ -0.48
CPNE8-204ENST00000546603 ATP5J2-PTCD1G3V325 749 aa12.06□□□□□ -0.48
CPNE8-204ENST00000546603 SCTRP47872 440 aa12.06□□□□□ -0.48
CPNE8-204ENST00000546603 MAP7D1Q3KQU3 841 aa12.06□□□□□ -0.48
CPNE8-204ENST00000546603 KDF1Q8NAX2 398 aaPredicted RBP12.06□□□□□ -0.48
CPNE8-204ENST00000546603 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
CPNE8-204ENST00000546603 ZNF395Q9H8N7 513 aaPredicted RBP12.06□□□□□ -0.48
CPNE8-204ENST00000546603 POM121CA8CG34 1229 aa12.05□□□□□ -0.48
CPNE8-204ENST00000546603 USP4Q13107 963 aa12.05□□□□□ -0.48
CPNE8-204ENST00000546603 CYP2U1Q7Z449 544 aa12.05□□□□□ -0.48
CPNE8-204ENST00000546603 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms