RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ANKRD1Q15327 319 aa14.59□□□□□ -0.07
NPC1L1-204ENST00000546276 SAFBQ15424 915 aaKnown RBP eCLIP14.59□□□□□ -0.07
NPC1L1-204ENST00000546276 PARD3Q8TEW0 1356 aa14.58□□□□□ -0.07
NPC1L1-204ENST00000546276 CCDC66A2RUB6 948 aa14.58□□□□□ -0.07
NPC1L1-204ENST00000546276 HDGFL1Q5TGJ6 251 aa14.58□□□□□ -0.08
NPC1L1-204ENST00000546276 CCDC112Q8NEF3 446 aa14.58□□□□□ -0.08
NPC1L1-204ENST00000546276 ZNF396Q96N95 335 aaPredicted RBP14.58□□□□□ -0.08
NPC1L1-204ENST00000546276 SLC52A1Q9NWF4 448 aa14.58□□□□□ -0.08
NPC1L1-204ENST00000546276 SMC2O95347 1197 aa14.58□□□□□ -0.08
NPC1L1-204ENST00000546276 PSME1Q06323 249 aa14.58□□□□□ -0.08
NPC1L1-204ENST00000546276 SCAF11Q99590 1463 aaKnown RBP14.58□□□□□ -0.08
NPC1L1-204ENST00000546276 LARP1BQ659C4 914 aaKnown RBP14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 UGGT2Q9NYU1 1516 aa14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 BMP2KLQ5H9B9 411 aa14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 ZSCAN31Q96LW9 406 aaPredicted RBP14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 THOC2Q8NI27 1593 aaKnown RBP14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 CCP110O43303 1012 aa14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 ACBD3Q9H3P7 528 aa14.57□□□□□ -0.08
NPC1L1-204ENST00000546276 MARCH6O60337 910 aa14.56□□□□□ -0.08
NPC1L1-204ENST00000546276 WASHC4Q2M389 1173 aa14.56□□□□□ -0.08
NPC1L1-204ENST00000546276 PCMTD1Q96MG8 357 aaPredicted RBP14.56□□□□□ -0.08
NPC1L1-204ENST00000546276 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
NPC1L1-204ENST00000546276 KIF14Q15058 1648 aa14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 HSP90B2PQ58FF3 399 aa14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 PDILTQ8N807 584 aa14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 MAP4K4O95819 1239 aaPredicted RBP14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 NUTM2GQ5VZR2 741 aa14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 CCDC47Q96A33 483 aaKnown RBP14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 PDRG1Q9NUG6 133 aa14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 RTEL1-TNFRSF6BF6WH68 1400 aa14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 CEBPZQ03701 1054 aaKnown RBP14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 FMNL2Q96PY5 1086 aa14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 NUP62CLQ9H1M0 184 aa14.55□□□□□ -0.08
NPC1L1-204ENST00000546276 ERICH2A1L162 156 aa14.54□□□□□ -0.08
NPC1L1-204ENST00000546276 DHX8Q14562 1220 aaKnown RBP14.54□□□□□ -0.08
NPC1L1-204ENST00000546276 DNAJC2Q99543 621 aaKnown RBP14.54□□□□□ -0.08
NPC1L1-204ENST00000546276 RAPGEF4Q8WZA2 1011 aa14.54□□□□□ -0.08
NPC1L1-204ENST00000546276 STK38Q15208 465 aa14.54□□□□□ -0.08
NPC1L1-204ENST00000546276 PDIA4P13667 645 aaKnown RBP14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 GTF2E1P29083 439 aaPredicted RBP14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 TBC1D9Q6ZT07 1266 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 TXNDC2Q86VQ3 553 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 JAKMIP1Q96N16 626 aaKnown RBP14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 IL1RAPL2Q9NP60 686 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 EXOC6BQ9Y2D4 811 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 XRCC6P12956 609 aaKnown RBP eCLIP14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 HDAC1Q13547 482 aaPredicted RBP14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 RRS1Q15050 365 aaKnown RBP14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 SPATA32Q96LK8 384 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 SRGAP3O43295 1099 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 SMARCA5O60264 1052 aaPredicted RBP14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 MX1P20591 662 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 CLCN1P35523 988 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 XPCQ01831 940 aaPredicted RBP14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 STK3Q13188 491 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 BLOC1S2Q6QNY1 142 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 PPP6R1Q9UPN7 881 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 PCDHB15Q9Y5E8 787 aa14.53□□□□□ -0.08
NPC1L1-204ENST00000546276 DHX16O60231 1041 aaKnown RBP14.52□□□□□ -0.08
NPC1L1-204ENST00000546276 BAG4O95429 457 aaKnown RBP14.52□□□□□ -0.08
NPC1L1-204ENST00000546276 KLHL40Q2TBA0 621 aa14.52□□□□□ -0.08
NPC1L1-204ENST00000546276 PDCL3Q9H2J4 239 aa14.52□□□□□ -0.08
NPC1L1-204ENST00000546276 NOM1Q5C9Z4 860 aaKnown RBP14.52□□□□□ -0.08
NPC1L1-204ENST00000546276 CWC27Q6UX04 472 aaKnown RBP14.52□□□□□ -0.08
NPC1L1-204ENST00000546276 UPF3BQ9BZI7 483 aaKnown RBP14.52□□□□□ -0.09
NPC1L1-204ENST00000546276 PLEKHH1Q9ULM0 1364 aa14.51□□□□□ -0.09
NPC1L1-204ENST00000546276 CCDC183Q5T5S1 534 aa14.51□□□□□ -0.09
NPC1L1-204ENST00000546276 ADGRF5Q8IZF2 1346 aa14.51□□□□□ -0.09
NPC1L1-204ENST00000546276 MAP3K11Q16584 847 aa14.51□□□□□ -0.09
NPC1L1-204ENST00000546276 PLEKHO1Q53GL0 409 aaPredicted RBP14.51□□□□□ -0.09
NPC1L1-204ENST00000546276 CWC15Q9P013 229 aaKnown RBP14.51□□□□□ -0.09
NPC1L1-204ENST00000546276 PDCL2Q8N4E4 241 aa14.5□□□□□ -0.09
NPC1L1-204ENST00000546276 ME1P48163 572 aa14.5□□□□□ -0.09
NPC1L1-204ENST00000546276 NSD2O96028 1365 aa14.5□□□□□ -0.09
NPC1L1-204ENST00000546276 MCM5P33992 734 aa14.5□□□□□ -0.09
NPC1L1-204ENST00000546276 ABTB2Q8N961 1025 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 CEP89Q96ST8 783 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 CFAP45Q9UL16 551 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 FAM135AQ9P2D6 1515 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 IL16Q14005 1332 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 CASTP20810 708 aaKnown RBP14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 AK7Q96M32 723 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 GPATCH8Q9UKJ3 1502 aaKnown RBP14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 ASXL1Q8IXJ9 1541 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 TCOF1Q13428 1488 aaKnown RBP14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 NUCB1Q02818 461 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 AACSQ86V21 672 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 JMYQ8N9B5 988 aa14.49□□□□□ -0.09
NPC1L1-204ENST00000546276 CEP57L1Q8IYX8 460 aa14.48□□□□□ -0.09
NPC1L1-204ENST00000546276 CFAP43Q8NDM7 1665 aa14.48□□□□□ -0.09
NPC1L1-204ENST00000546276 NUTM1Q86Y26 1132 aa14.48□□□□□ -0.09
NPC1L1-204ENST00000546276 ERCC4Q92889 916 aaPredicted RBP14.48□□□□□ -0.09
NPC1L1-204ENST00000546276 RUFY1Q96T51 708 aa14.48□□□□□ -0.09
NPC1L1-204ENST00000546276 PRAG1Q86YV5 1406 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 PANK2Q9BZ23 570 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 SERPINC1P01008 464 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 NLRP2Q9NX02 1062 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms