RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	ZNF777	Q9ULD5	760 aa	Predicted RBP	8.46	□□□□□ -1.06
RAP1B-231	ENST00000544639	ARID3C	A6NKF2	412 aa		8.45	□□□□□ -1.06
RAP1B-231	ENST00000544639	PTK2	Q05397	1052 aa		8.45	□□□□□ -1.06
RAP1B-231	ENST00000544639	WFS1	O76024	890 aa		8.44	□□□□□ -1.06
RAP1B-231	ENST00000544639	SH3RF1	Q7Z6J0	888 aa		8.44	□□□□□ -1.06
RAP1B-231	ENST00000544639	ARHGAP9	Q9BRR9	750 aa		8.44	□□□□□ -1.06
RAP1B-231	ENST00000544639	BPHL	Q86WA6	291 aa	Predicted RBP	8.43	□□□□□ -1.06
RAP1B-231	ENST00000544639	MPND	Q8N594	471 aa		8.43	□□□□□ -1.06
RAP1B-231	ENST00000544639	ADAMTS19	Q8TE59	1207 aa		8.43	□□□□□ -1.06
RAP1B-231	ENST00000544639	FOXJ1	Q92949	421 aa		8.43	□□□□□ -1.06
RAP1B-231	ENST00000544639	SNRPB	P14678	240 aa	Known RBP	8.42	□□□□□ -1.06
RAP1B-231	ENST00000544639	SOX11	P35716	441 aa		8.42	□□□□□ -1.06
RAP1B-231	ENST00000544639	NFX1	Q12986	1120 aa	Known RBP	8.42	□□□□□ -1.06
RAP1B-231	ENST00000544639	C4orf48	Q5BLP8	95 aa		8.42	□□□□□ -1.06
RAP1B-231	ENST00000544639	GLMN	Q92990	594 aa		8.42	□□□□□ -1.06
RAP1B-231	ENST00000544639	WASF2	Q9Y6W5	498 aa		8.42	□□□□□ -1.06
RAP1B-231	ENST00000544639	VARS	P26640	1264 aa	Known RBP	8.41	□□□□□ -1.06
RAP1B-231	ENST00000544639	EIF4G2	P78344	907 aa	Known RBP eCLIP	8.41	□□□□□ -1.06
RAP1B-231	ENST00000544639	ADAM32	Q8TC27	787 aa		8.41	□□□□□ -1.06
RAP1B-231	ENST00000544639	CARD14	Q9BXL6	1004 aa		8.41	□□□□□ -1.06
RAP1B-231	ENST00000544639	ALG2	Q9H553	416 aa		8.41	□□□□□ -1.06
RAP1B-231	ENST00000544639	MAGEB6P1	A0A0J9YX57	407 aa		8.4	□□□□□ -1.06
RAP1B-231	ENST00000544639	AGER	Q15109	404 aa		8.4	□□□□□ -1.06
RAP1B-231	ENST00000544639	ZBTB33	Q86T24	672 aa		8.4	□□□□□ -1.06
RAP1B-231	ENST00000544639	C1QTNF2	Q9BXJ5	285 aa		8.4	□□□□□ -1.06
RAP1B-231	ENST00000544639	WIPF1	O43516	503 aa		8.39	□□□□□ -1.07
RAP1B-231	ENST00000544639	ERFE	Q4G0M1	354 aa		8.39	□□□□□ -1.07
RAP1B-231	ENST00000544639	HDGFL1	Q5TGJ6	251 aa		8.39	□□□□□ -1.07
RAP1B-231	ENST00000544639	TERT	O14746	1132 aa	Known RBP	8.38	□□□□□ -1.07
RAP1B-231	ENST00000544639	CAPN5	O15484	640 aa	Predicted RBP	8.38	□□□□□ -1.07
RAP1B-231	ENST00000544639	CALR3	Q96L12	384 aa	Known RBP	8.38	□□□□□ -1.07
RAP1B-231	ENST00000544639	PCDHB9	Q9Y5E1	797 aa		8.38	□□□□□ -1.07
RAP1B-231	ENST00000544639	SEMA3F	Q13275	785 aa		8.37	□□□□□ -1.07
RAP1B-231	ENST00000544639	CCDC82	Q8N4S0	544 aa		8.37	□□□□□ -1.07
RAP1B-231	ENST00000544639	ZNF592	Q92610	1267 aa		8.37	□□□□□ -1.07
RAP1B-231	ENST00000544639	MCCD1	P59942	119 aa	Predicted RBP	8.36	□□□□□ -1.07
RAP1B-231	ENST00000544639	TRMT44	Q8IYL2	757 aa	Known RBP	8.36	□□□□□ -1.07
RAP1B-231	ENST00000544639	TRIM46	Q7Z4K8	759 aa		8.35	□□□□□ -1.07
RAP1B-231	ENST00000544639	DZIP3	Q86Y13	1208 aa	Known RBP	8.35	□□□□□ -1.07
RAP1B-231	ENST00000544639	FAM174A	Q8TBP5	190 aa		8.35	□□□□□ -1.07
RAP1B-231	ENST00000544639	SLC10A4	Q96EP9	437 aa		8.35	□□□□□ -1.07
RAP1B-231	ENST00000544639	TLL2	Q9Y6L7	1015 aa		8.35	□□□□□ -1.07
RAP1B-231	ENST00000544639	CCDC97	Q96F63	343 aa	Predicted RBP	8.34	□□□□□ -1.07
RAP1B-231	ENST00000544639	UCN2	Q96RP3	112 aa		8.34	□□□□□ -1.07
RAP1B-231	ENST00000544639	SERPINA10	Q9UK55	444 aa		8.34	□□□□□ -1.07
RAP1B-231	ENST00000544639	INSM1	Q01101	510 aa	Predicted RBP	8.33	□□□□□ -1.08
RAP1B-231	ENST00000544639	NPAS3	Q8IXF0	933 aa		8.33	□□□□□ -1.08
RAP1B-231	ENST00000544639	CEP126	Q9P2H0	1117 aa		8.33	□□□□□ -1.08
RAP1B-231	ENST00000544639	BMP1	P13497	986 aa		8.32	□□□□□ -1.08
RAP1B-231	ENST00000544639	NNT	Q13423	1086 aa		8.32	□□□□□ -1.08
RAP1B-231	ENST00000544639	CDK15	Q96Q40	435 aa		8.32	□□□□□ -1.08
RAP1B-231	ENST00000544639	CDV3	Q9UKY7	258 aa	Known RBP	8.32	□□□□□ -1.08
RAP1B-231	ENST00000544639	MAP4K5	Q9Y4K4	846 aa		8.32	□□□□□ -1.08
RAP1B-231	ENST00000544639	ARID3A	Q99856	593 aa		8.31	□□□□□ -1.08
RAP1B-231	ENST00000544639	NXF1	Q9UBU9	619 aa	Known RBP	8.31	□□□□□ -1.08
RAP1B-231	ENST00000544639	ESPN	B1AK53	854 aa		8.3	□□□□□ -1.08
RAP1B-231	ENST00000544639	PIK3CD	O00329	1044 aa		8.3	□□□□□ -1.08
RAP1B-231	ENST00000544639	ADH1C	P00326	375 aa		8.3	□□□□□ -1.08
RAP1B-231	ENST00000544639	NBPF20	Q3BBV1	942 aa		8.3	□□□□□ -1.08
RAP1B-231	ENST00000544639	LCE2C	Q5TA81	110 aa		8.3	□□□□□ -1.08
RAP1B-231	ENST00000544639	SLC16A10	Q8TF71	515 aa		8.3	□□□□□ -1.08
RAP1B-231	ENST00000544639	STK17A	Q9UEE5	414 aa		8.3	□□□□□ -1.08
RAP1B-231	ENST00000544639	TIMP2	P16035	220 aa		8.29	□□□□□ -1.08
RAP1B-231	ENST00000544639	PHTF2	Q8N3S3	785 aa		8.29	□□□□□ -1.08
RAP1B-231	ENST00000544639	NFATC2IP	Q8NCF5	419 aa		8.29	□□□□□ -1.08
RAP1B-231	ENST00000544639	KLF16	Q9BXK1	252 aa	Predicted RBP	8.29	□□□□□ -1.08
RAP1B-231	ENST00000544639	PPP1R12C	Q9BZL4	782 aa		8.29	□□□□□ -1.08
RAP1B-231	ENST00000544639	PALM3	A6NDB9	673 aa	Predicted RBP	8.28	□□□□□ -1.08
RAP1B-231	ENST00000544639	GIGYF1	O75420	1035 aa	Predicted RBP	8.28	□□□□□ -1.08
RAP1B-231	ENST00000544639	NR5A1	Q13285	461 aa		8.28	□□□□□ -1.08
RAP1B-231	ENST00000544639	SLFNL1	Q499Z3	407 aa		8.28	□□□□□ -1.08
RAP1B-231	ENST00000544639	TBC1D9	Q6ZT07	1266 aa		8.28	□□□□□ -1.08
RAP1B-231	ENST00000544639	VASH1	Q7L8A9	365 aa	Predicted RBP	8.28	□□□□□ -1.08
RAP1B-231	ENST00000544639	ZFP42	Q96MM3	310 aa		8.28	□□□□□ -1.08
RAP1B-231	ENST00000544639	KCTD15	Q96SI1	283 aa	Predicted RBP	8.28	□□□□□ -1.08
RAP1B-231	ENST00000544639	ATP9B	O43861	1147 aa		8.27	□□□□□ -1.09
RAP1B-231	ENST00000544639	WDR4	P57081	412 aa	Known RBP	8.27	□□□□□ -1.09
RAP1B-231	ENST00000544639	SCARF1	Q14162	830 aa		8.27	□□□□□ -1.09
RAP1B-231	ENST00000544639	CFAP70	Q5T0N1	1121 aa		8.27	□□□□□ -1.09
RAP1B-231	ENST00000544639	MRPL14	Q6P1L8	145 aa	Known RBP	8.27	□□□□□ -1.09
RAP1B-231	ENST00000544639	RNF135	Q8IUD6	432 aa		8.27	□□□□□ -1.09
RAP1B-231	ENST00000544639	TFIP11	Q9UBB9	837 aa	Known RBP	8.27	□□□□□ -1.09
RAP1B-231	ENST00000544639	CHIC2	Q9UKJ5	165 aa		8.27	□□□□□ -1.09
RAP1B-231	ENST00000544639	ARID5B	Q14865	1188 aa		8.26	□□□□□ -1.09
RAP1B-231	ENST00000544639	INTS6L	Q5JSJ4	861 aa	Known RBP	8.26	□□□□□ -1.09
RAP1B-231	ENST00000544639	SEPT12	Q8IYM1	358 aa		8.26	□□□□□ -1.09
RAP1B-231	ENST00000544639	SKI	P12755	728 aa		8.25	□□□□□ -1.09
RAP1B-231	ENST00000544639	FSHR	P23945	695 aa		8.25	□□□□□ -1.09
RAP1B-231	ENST00000544639	GRM5	P41594	1212 aa		8.25	□□□□□ -1.09
RAP1B-231	ENST00000544639	RNF20	Q5VTR2	975 aa		8.25	□□□□□ -1.09
RAP1B-231	ENST00000544639	IRF7	Q92985	503 aa		8.25	□□□□□ -1.09
RAP1B-231	ENST00000544639	CCDC85A	Q96PX6	553 aa	Predicted RBP	8.25	□□□□□ -1.09
RAP1B-231	ENST00000544639	MAFB	Q9Y5Q3	323 aa	Predicted RBP	8.25	□□□□□ -1.09
RAP1B-231	ENST00000544639	USP17L5	A8MUK1	530 aa		8.24	□□□□□ -1.09
RAP1B-231	ENST00000544639	PLPP7	Q8NBV4	271 aa		8.24	□□□□□ -1.09
RAP1B-231	ENST00000544639		H3BM21	787 aa		8.23	□□□□□ -1.09
RAP1B-231	ENST00000544639	CCDC125	Q86Z20	511 aa		8.23	□□□□□ -1.09
RAP1B-231	ENST00000544639	USP17L3	A6NCW0	530 aa		8.22	□□□□□ -1.09
RAP1B-231	ENST00000544639	USP17L4	A6NCW7	530 aa		8.22	□□□□□ -1.09
RAP1B-231	ENST00000544639	LMOD1	P29536	600 aa	Predicted RBP	8.22	□□□□□ -1.09

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms