RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 TSHZ2Q9NRE2 1034 aa17.85■□□□□ 0.45
HCFC2-202ENST00000544223 TNNQ9UQP3 1299 aa17.85■□□□□ 0.45
HCFC2-202ENST00000544223 SKAP1Q86WV1 359 aa17.84■□□□□ 0.45
HCFC2-202ENST00000544223 FRAT1Q92837 279 aaPredicted RBP17.83■□□□□ 0.45
HCFC2-202ENST00000544223 ANKARQ7Z5J8 1434 aa17.83■□□□□ 0.45
HCFC2-202ENST00000544223 AMPHP49418 695 aa17.83■□□□□ 0.44
HCFC2-202ENST00000544223 TTC21AQ8NDW8 1320 aa17.82■□□□□ 0.44
HCFC2-202ENST00000544223 TMEM94Q12767 1356 aa17.82■□□□□ 0.44
HCFC2-202ENST00000544223 WDR63Q8IWG1 891 aa17.81■□□□□ 0.44
HCFC2-202ENST00000544223 FANCIQ9NVI1 1328 aa17.81■□□□□ 0.44
HCFC2-202ENST00000544223 ERICH6BQ5W0A0 696 aa17.81■□□□□ 0.44
HCFC2-202ENST00000544223 USP31Q70CQ4 1352 aa17.81■□□□□ 0.44
HCFC2-202ENST00000544223 EXOSC9Q06265 439 aaKnown RBP17.8■□□□□ 0.44
HCFC2-202ENST00000544223 CCDC27Q2M243 656 aa17.8■□□□□ 0.44
HCFC2-202ENST00000544223 USHBP1Q8N6Y0 703 aa17.8■□□□□ 0.44
HCFC2-202ENST00000544223 MARF1Q9Y4F3 1742 aaKnown RBP17.8■□□□□ 0.44
HCFC2-202ENST00000544223 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
HCFC2-202ENST00000544223 ELL2O00472 640 aaPredicted RBP17.78■□□□□ 0.44
HCFC2-202ENST00000544223 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
HCFC2-202ENST00000544223 CLUAP1Q96AJ1 413 aa17.78■□□□□ 0.44
HCFC2-202ENST00000544223 NEFMP07197 916 aa17.77■□□□□ 0.44
HCFC2-202ENST00000544223 RARSP54136 660 aaKnown RBP17.77■□□□□ 0.44
HCFC2-202ENST00000544223 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.44
HCFC2-202ENST00000544223 TCERG1O14776 1098 aaKnown RBP17.77■□□□□ 0.44
HCFC2-202ENST00000544223 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
HCFC2-202ENST00000544223 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.44
HCFC2-202ENST00000544223 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.43
HCFC2-202ENST00000544223 ZNF335Q9H4Z2 1342 aaPredicted RBP17.76■□□□□ 0.43
HCFC2-202ENST00000544223 MCM10Q7L590 875 aa17.76■□□□□ 0.43
HCFC2-202ENST00000544223 EYA1Q99502 592 aa17.76■□□□□ 0.43
HCFC2-202ENST00000544223 CANXP27824 592 aaKnown RBP17.76■□□□□ 0.43
HCFC2-202ENST00000544223 HOXC9P31274 260 aa17.75■□□□□ 0.43
HCFC2-202ENST00000544223 MYH16Q9H6N6 1097 aa17.75■□□□□ 0.43
HCFC2-202ENST00000544223 NWD1Q149M9 1564 aa17.75■□□□□ 0.43
HCFC2-202ENST00000544223 ATF3P18847 181 aa17.74■□□□□ 0.43
HCFC2-202ENST00000544223 COG6Q9Y2V7 657 aa17.74■□□□□ 0.43
HCFC2-202ENST00000544223 FLT4P35916 1363 aa17.74■□□□□ 0.43
HCFC2-202ENST00000544223 C1orf167Q5SNV9 1468 aa17.73■□□□□ 0.43
HCFC2-202ENST00000544223 RLBP1P12271 317 aa17.73■□□□□ 0.43
HCFC2-202ENST00000544223 KRT28Q7Z3Y7 464 aa17.73■□□□□ 0.43
HCFC2-202ENST00000544223 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
HCFC2-202ENST00000544223 STRCQ7RTU9 1775 aa17.73■□□□□ 0.43
HCFC2-202ENST00000544223 SBNO1A3KN83 1393 aa17.73■□□□□ 0.43
HCFC2-202ENST00000544223 CABLES1Q8TDN4 633 aa17.73■□□□□ 0.43
HCFC2-202ENST00000544223 MIS18AQ9NYP9 233 aa17.73■□□□□ 0.43
HCFC2-202ENST00000544223 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
HCFC2-202ENST00000544223 KRT24Q2M2I5 525 aa17.71■□□□□ 0.43
HCFC2-202ENST00000544223 LRRC59Q96AG4 307 aaKnown RBP17.71■□□□□ 0.43
HCFC2-202ENST00000544223 ZC3H6P61129 1189 aaKnown RBP17.7■□□□□ 0.42
HCFC2-202ENST00000544223 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
HCFC2-202ENST00000544223 SSH1Q8WYL5 1049 aa17.7■□□□□ 0.42
HCFC2-202ENST00000544223 LTN1O94822 1766 aa17.7■□□□□ 0.42
HCFC2-202ENST00000544223 MBIPQ9NS73 344 aa17.7■□□□□ 0.42
HCFC2-202ENST00000544223 GCP02774 474 aa17.69■□□□□ 0.42
HCFC2-202ENST00000544223 SMC4Q9NTJ3 1288 aa17.69■□□□□ 0.42
HCFC2-202ENST00000544223 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
HCFC2-202ENST00000544223 MST1RQ04912 1400 aa17.68■□□□□ 0.42
HCFC2-202ENST00000544223 AXIN2Q9Y2T1 843 aa17.68■□□□□ 0.42
HCFC2-202ENST00000544223 RGPD1P0DJD0 1748 aa17.68■□□□□ 0.42
HCFC2-202ENST00000544223 NBPF6Q5VWK0 638 aa17.67■□□□□ 0.42
HCFC2-202ENST00000544223 NBPF4Q96M43 638 aa17.67■□□□□ 0.42
HCFC2-202ENST00000544223 C8orf58Q8NAV2 365 aa17.66■□□□□ 0.42
HCFC2-202ENST00000544223 RGPD2P0DJD1 1756 aa17.66■□□□□ 0.42
HCFC2-202ENST00000544223 XIRP1Q702N8 1843 aaKnown RBP17.66■□□□□ 0.42
HCFC2-202ENST00000544223 IGSF1Q8N6C5 1336 aa17.65■□□□□ 0.42
HCFC2-202ENST00000544223 NFAT5O94916 1531 aa17.65■□□□□ 0.42
HCFC2-202ENST00000544223 NOB1Q9ULX3 412 aaKnown RBP17.64■□□□□ 0.41
HCFC2-202ENST00000544223 IL16Q14005 1332 aa17.63■□□□□ 0.41
HCFC2-202ENST00000544223 CHRNA2Q15822 529 aa17.62■□□□□ 0.41
HCFC2-202ENST00000544223 IP6K1Q92551 441 aa17.62■□□□□ 0.41
HCFC2-202ENST00000544223 RBM19Q9Y4C8 960 aaKnown RBP17.62■□□□□ 0.41
HCFC2-202ENST00000544223 ARHGEF10O15013 1369 aa17.62■□□□□ 0.41
HCFC2-202ENST00000544223 MSH6P52701 1360 aa17.62■□□□□ 0.41
HCFC2-202ENST00000544223 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
HCFC2-202ENST00000544223 ZNF853P0CG23 659 aa17.61■□□□□ 0.41
HCFC2-202ENST00000544223 CADPS2Q86UW7 1296 aa17.61■□□□□ 0.41
HCFC2-202ENST00000544223 TRPM3Q9HCF6 1732 aaPredicted RBP17.61■□□□□ 0.41
HCFC2-202ENST00000544223 TRIM27P14373 513 aa17.61■□□□□ 0.41
HCFC2-202ENST00000544223 CFAP44Q96MT7 982 aa17.61■□□□□ 0.41
HCFC2-202ENST00000544223 VAMP4O75379 141 aa17.6■□□□□ 0.41
HCFC2-202ENST00000544223 GNAI1P63096 354 aa17.6■□□□□ 0.41
HCFC2-202ENST00000544223 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
HCFC2-202ENST00000544223 IGHDP01880 384 aa17.6■□□□□ 0.41
HCFC2-202ENST00000544223 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
HCFC2-202ENST00000544223 ARHGEF25Q86VW2 580 aa17.6■□□□□ 0.41
HCFC2-202ENST00000544223 KDRP35968 1356 aa17.6■□□□□ 0.41
HCFC2-202ENST00000544223 RGPD5Q99666 1765 aa17.6■□□□□ 0.41
HCFC2-202ENST00000544223 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
HCFC2-202ENST00000544223 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.41
HCFC2-202ENST00000544223 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
HCFC2-202ENST00000544223 USP54Q70EL1 1684 aa17.57■□□□□ 0.4
HCFC2-202ENST00000544223 MED1Q15648 1581 aaPredicted RBP17.57■□□□□ 0.4
HCFC2-202ENST00000544223 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
HCFC2-202ENST00000544223 ZKSCAN2Q63HK3 967 aa17.57■□□□□ 0.4
HCFC2-202ENST00000544223 ANKRD24Q8TF21 1146 aa17.57■□□□□ 0.4
HCFC2-202ENST00000544223 LMOD3Q0VAK6 560 aa17.57■□□□□ 0.4
HCFC2-202ENST00000544223 RTF1Q92541 710 aaKnown RBP17.57■□□□□ 0.4
HCFC2-202ENST00000544223 SLAIN2Q9P270 581 aa17.57■□□□□ 0.4
HCFC2-202ENST00000544223 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
HCFC2-202ENST00000544223 PCDHB15Q9Y5E8 787 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms