RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
RAP1B-230ENST00000543697 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
RAP1B-230ENST00000543697 NUP153P49790 1475 aaKnown RBP11.75□□□□□ -0.53
RAP1B-230ENST00000543697 CPS1P31327 1500 aa11.75□□□□□ -0.53
RAP1B-230ENST00000543697 GOLGA8CPA6NN73 597 aa11.74□□□□□ -0.53
RAP1B-230ENST00000543697 ACTN4O43707 911 aaKnown RBP11.74□□□□□ -0.53
RAP1B-230ENST00000543697 SERPINA10Q9UK55 444 aa11.74□□□□□ -0.53
RAP1B-230ENST00000543697 ATP10BO94823 1461 aa11.74□□□□□ -0.53
RAP1B-230ENST00000543697 TCOF1Q13428 1488 aaKnown RBP11.74□□□□□ -0.53
RAP1B-230ENST00000543697 HRO43593 1189 aa11.73□□□□□ -0.53
RAP1B-230ENST00000543697 RNF40O75150 1001 aa11.73□□□□□ -0.53
RAP1B-230ENST00000543697 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
RAP1B-230ENST00000543697 DESI1Q6ICB0 168 aa11.73□□□□□ -0.53
RAP1B-230ENST00000543697 FAM163AQ96GL9 167 aaPredicted RBP11.73□□□□□ -0.53
RAP1B-230ENST00000543697 SALL2Q9Y467 1007 aaPredicted RBP11.73□□□□□ -0.53
RAP1B-230ENST00000543697 NDUFB9Q9Y6M9 179 aa11.73□□□□□ -0.53
RAP1B-230ENST00000543697 ATP10AO60312 1499 aa11.72□□□□□ -0.53
RAP1B-230ENST00000543697 PCDHGC3Q9UN70 934 aa11.72□□□□□ -0.53
RAP1B-230ENST00000543697 CDK13Q14004 1512 aaKnown RBP11.71□□□□□ -0.53
RAP1B-230ENST00000543697 PLA2R1Q13018 1463 aa11.71□□□□□ -0.53
RAP1B-230ENST00000543697 C9orf84Q5VXU9 1444 aa11.71□□□□□ -0.53
RAP1B-230ENST00000543697 PLEKHD1A6NEE1 506 aa11.71□□□□□ -0.53
RAP1B-230ENST00000543697 RETREG3Q86VR2 466 aa11.71□□□□□ -0.53
RAP1B-230ENST00000543697 PNMA1Q8ND90 353 aa11.71□□□□□ -0.53
RAP1B-230ENST00000543697 CABLES1Q8TDN4 633 aa11.71□□□□□ -0.53
RAP1B-230ENST00000543697 CASKIN1Q8WXD9 1431 aa11.7□□□□□ -0.54
RAP1B-230ENST00000543697 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
RAP1B-230ENST00000543697 FBXO31Q5XUX0 539 aaPredicted RBP11.7□□□□□ -0.54
RAP1B-230ENST00000543697 ZNF330Q9Y3S2 320 aaPredicted RBP11.7□□□□□ -0.54
RAP1B-230ENST00000543697 FYCO1Q9BQS8 1478 aa11.7□□□□□ -0.54
RAP1B-230ENST00000543697 SOWAHBA6NEL2 793 aa11.69□□□□□ -0.54
RAP1B-230ENST00000543697 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
RAP1B-230ENST00000543697 CCDC97Q96F63 343 aaPredicted RBP11.69□□□□□ -0.54
RAP1B-230ENST00000543697 POM121Q96HA1 1249 aa11.69□□□□□ -0.54
RAP1B-230ENST00000543697 CDK11AQ9UQ88 783 aaPredicted RBP11.69□□□□□ -0.54
RAP1B-230ENST00000543697 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
RAP1B-230ENST00000543697 MORN1Q5T089 497 aa11.68□□□□□ -0.54
RAP1B-230ENST00000543697 C1orf115Q9H7X2 142 aa11.68□□□□□ -0.54
RAP1B-230ENST00000543697 SHANK2Q9UPX8 1470 aa11.68□□□□□ -0.54
RAP1B-230ENST00000543697 PPP4CP60510 307 aa11.67□□□□□ -0.54
RAP1B-230ENST00000543697 TSR3Q9UJK0 312 aaKnown RBP11.67□□□□□ -0.54
RAP1B-230ENST00000543697 CCDC18Q5T9S5 1454 aa11.67□□□□□ -0.54
RAP1B-230ENST00000543697 NYAP1Q6ZVC0 841 aa11.66□□□□□ -0.54
RAP1B-230ENST00000543697 GDPD2Q9HCC8 539 aa11.66□□□□□ -0.54
RAP1B-230ENST00000543697 VPS8Q8N3P4 1428 aa11.66□□□□□ -0.54
RAP1B-230ENST00000543697 NR1I2O75469 434 aa11.65□□□□□ -0.54
RAP1B-230ENST00000543697 CCDC82Q8N4S0 544 aa11.65□□□□□ -0.54
RAP1B-230ENST00000543697 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
RAP1B-230ENST00000543697 ZNF142P52746 1687 aaPredicted RBP11.65□□□□□ -0.55
RAP1B-230ENST00000543697 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
RAP1B-230ENST00000543697 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
RAP1B-230ENST00000543697 CFAP74Q9C0B2 1584 aa11.63□□□□□ -0.55
RAP1B-230ENST00000543697 PRR7Q8TB68 274 aa11.63□□□□□ -0.55
RAP1B-230ENST00000543697 GJD4Q96KN9 370 aaPredicted RBP11.63□□□□□ -0.55
RAP1B-230ENST00000543697 NPATQ14207 1427 aa11.62□□□□□ -0.55
RAP1B-230ENST00000543697 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
RAP1B-230ENST00000543697 ABL2P42684 1182 aa11.62□□□□□ -0.55
RAP1B-230ENST00000543697 POTEBQ6S5H4 581 aa11.62□□□□□ -0.55
RAP1B-230ENST00000543697 SUPT6HQ7KZ85 1726 aaKnown RBP11.62□□□□□ -0.55
RAP1B-230ENST00000543697 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
RAP1B-230ENST00000543697 CFAP99D6REC4 459 aa11.61□□□□□ -0.55
RAP1B-230ENST00000543697 SOX11P35716 441 aa11.61□□□□□ -0.55
RAP1B-230ENST00000543697 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
RAP1B-230ENST00000543697 WNT2BQ93097 391 aa11.61□□□□□ -0.55
RAP1B-230ENST00000543697 HLA-CQ95604 372 aa11.61□□□□□ -0.55
RAP1B-230ENST00000543697 ZNF777Q9ULD5 760 aaPredicted RBP11.61□□□□□ -0.55
RAP1B-230ENST00000543697 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
RAP1B-230ENST00000543697 HPS5Q9UPZ3 1129 aa11.61□□□□□ -0.55
RAP1B-230ENST00000543697 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
RAP1B-230ENST00000543697 KIF14Q15058 1648 aa11.6□□□□□ -0.55
RAP1B-230ENST00000543697 MTUS2Q5JR59 1369 aa11.6□□□□□ -0.55
RAP1B-230ENST00000543697 TSC1Q92574 1164 aa11.6□□□□□ -0.55
RAP1B-230ENST00000543697 USB1Q9BQ65 265 aaKnown RBP11.6□□□□□ -0.55
RAP1B-230ENST00000543697 SLC27A5Q9Y2P5 690 aa11.6□□□□□ -0.55
RAP1B-230ENST00000543697 TROQ12816 1431 aaPredicted RBP11.6□□□□□ -0.55
RAP1B-230ENST00000543697 FMNL1O95466 1100 aaPredicted RBP11.59□□□□□ -0.55
RAP1B-230ENST00000543697 ANKRD13DQ6ZTN6 518 aa11.59□□□□□ -0.55
RAP1B-230ENST00000543697 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
RAP1B-230ENST00000543697 ARID3AQ99856 593 aa11.59□□□□□ -0.55
RAP1B-230ENST00000543697 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
RAP1B-230ENST00000543697 NEURL4Q96JN8 1562 aa11.58□□□□□ -0.55
RAP1B-230ENST00000543697 MYO3AQ8NEV4 1616 aa11.58□□□□□ -0.56
RAP1B-230ENST00000543697 RNF17Q9BXT8 1623 aaKnown RBP11.58□□□□□ -0.56
RAP1B-230ENST00000543697 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.58□□□□□ -0.568e-7■■□□□ 12.8
RAP1B-230ENST00000543697 CEP170BQ9Y4F5 1589 aaPredicted RBP11.58□□□□□ -0.56
RAP1B-230ENST00000543697 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
RAP1B-230ENST00000543697 AGLP35573 1532 aa11.57□□□□□ -0.56
RAP1B-230ENST00000543697 ZNF592Q92610 1267 aa11.57□□□□□ -0.56
RAP1B-230ENST00000543697 TRIM34Q9BYJ4 488 aa11.57□□□□□ -0.56
RAP1B-230ENST00000543697 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
RAP1B-230ENST00000543697 LCE2DQ5TA82 110 aaPredicted RBP11.56□□□□□ -0.56
RAP1B-230ENST00000543697 LYPD8Q6UX82 237 aa11.56□□□□□ -0.56
RAP1B-230ENST00000543697 CALR3Q96L12 384 aaKnown RBP11.56□□□□□ -0.56
RAP1B-230ENST00000543697 MYO5CQ9NQX4 1742 aa11.56□□□□□ -0.56
RAP1B-230ENST00000543697 STRCP1A6NGW2 1772 aa11.56□□□□□ -0.56
RAP1B-230ENST00000543697 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
RAP1B-230ENST00000543697 REREQ9P2R6 1566 aa11.55□□□□□ -0.56
RAP1B-230ENST00000543697 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
RAP1B-230ENST00000543697 BRICD5Q6PL45 260 aa11.55□□□□□ -0.56
RAP1B-230ENST00000543697 PPP1R15AO75807 674 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms