RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 FNBP4Q8N3X1 1017 aaPredicted RBP8.28□□□□□ -1.08
MDM2-229ENST00000543046 ZNF592Q92610 1267 aa8.28□□□□□ -1.08
MDM2-229ENST00000543046 KCTD15Q96SI1 283 aaPredicted RBP8.28□□□□□ -1.08
MDM2-229ENST00000543046 MCCD1P59942 119 aaPredicted RBP8.27□□□□□ -1.09
MDM2-229ENST00000543046 NNTQ13423 1086 aa8.27□□□□□ -1.09
MDM2-229ENST00000543046 HPS1Q92902 700 aa8.26□□□□□ -1.09
MDM2-229ENST00000543046 POM121CA8CG34 1229 aa8.25□□□□□ -1.09
MDM2-229ENST00000543046 AVPP01185 164 aa8.25□□□□□ -1.09
MDM2-229ENST00000543046 NR3C2P08235 984 aa8.25□□□□□ -1.09
MDM2-229ENST00000543046 INTS6LQ5JSJ4 861 aaKnown RBP8.25□□□□□ -1.09
MDM2-229ENST00000543046 ZMYND15Q9H091 742 aa8.25□□□□□ -1.09
MDM2-229ENST00000543046 ESPNB1AK53 854 aa8.24□□□□□ -1.09
MDM2-229ENST00000543046 GIGYF1O75420 1035 aaPredicted RBP8.24□□□□□ -1.09
MDM2-229ENST00000543046 SOX11P35716 441 aa8.24□□□□□ -1.09
MDM2-229ENST00000543046 SEMA3FQ13275 785 aa8.24□□□□□ -1.09
MDM2-229ENST00000543046 Q6ZNB5 142 aa8.24□□□□□ -1.09
MDM2-229ENST00000543046 C14orf37Q86TY3 774 aa8.24□□□□□ -1.09
MDM2-229ENST00000543046 RAB15P59190 212 aa8.23□□□□□ -1.09
MDM2-229ENST00000543046 CCDC116Q8IYX3 515 aa8.23□□□□□ -1.09
MDM2-229ENST00000543046 CEP126Q9P2H0 1117 aa8.23□□□□□ -1.09
MDM2-229ENST00000543046 TRAK2O60296 914 aa8.22□□□□□ -1.09
MDM2-229ENST00000543046 SEPT12Q8IYM1 358 aa8.22□□□□□ -1.09
MDM2-229ENST00000543046 WDR4P57081 412 aaKnown RBP8.21□□□□□ -1.1
MDM2-229ENST00000543046 MYT1Q01538 1121 aa8.21□□□□□ -1.1
MDM2-229ENST00000543046 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
MDM2-229ENST00000543046 PPP1R26Q5T8A7 1209 aaPredicted RBP8.21□□□□□ -1.1
MDM2-229ENST00000543046 ALG2Q9H553 416 aa8.21□□□□□ -1.1
MDM2-229ENST00000543046 ERVH48-1M5A8F1 160 aa8.2□□□□□ -1.1
MDM2-229ENST00000543046 TIMP2P16035 220 aa8.2□□□□□ -1.1
MDM2-229ENST00000543046 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
MDM2-229ENST00000543046 RNF20Q5VTR2 975 aa8.2□□□□□ -1.1
MDM2-229ENST00000543046 ADAMTS19Q8TE59 1207 aa8.2□□□□□ -1.1
MDM2-229ENST00000543046 KLF16Q9BXK1 252 aaPredicted RBP8.2□□□□□ -1.1
MDM2-229ENST00000543046 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
MDM2-229ENST00000543046 ZIC2O95409 532 aaPredicted RBP8.19□□□□□ -1.1
MDM2-229ENST00000543046 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
MDM2-229ENST00000543046 HDGFL1Q5TGJ6 251 aa8.19□□□□□ -1.1
MDM2-229ENST00000543046 CRIPAKQ8N1N5 446 aa8.19□□□□□ -1.1
MDM2-229ENST00000543046 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
MDM2-229ENST00000543046 AXIN1O15169 862 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 ST8SIA5O15466 376 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 CAPN5O15484 640 aaPredicted RBP8.18□□□□□ -1.1
MDM2-229ENST00000543046 SLFNL1Q499Z3 407 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 TRAF7Q6Q0C0 670 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 CCDC125Q86Z20 511 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 GLMNQ92990 594 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 AAASQ9NRG9 546 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 TMPRSS4Q9NRS4 437 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
MDM2-229ENST00000543046 LCE2BO14633 110 aa8.17□□□□□ -1.1
MDM2-229ENST00000543046 ERICH6Q7L0X2 663 aa8.17□□□□□ -1.1
MDM2-229ENST00000543046 RNF135Q8IUD6 432 aa8.17□□□□□ -1.1
MDM2-229ENST00000543046 PHTF2Q8N3S3 785 aa8.17□□□□□ -1.1
MDM2-229ENST00000543046 ZNF777Q9ULD5 760 aaPredicted RBP8.17□□□□□ -1.1
MDM2-229ENST00000543046 ZNF784Q8NCA9 323 aaPredicted RBP8.16□□□□□ -1.1
MDM2-229ENST00000543046 CCDC85AQ96PX6 553 aaPredicted RBP8.16□□□□□ -1.1
MDM2-229ENST00000543046 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
MDM2-229ENST00000543046 PIK3CDO00329 1044 aa8.15□□□□□ -1.1
MDM2-229ENST00000543046 CALR3Q96L12 384 aaKnown RBP8.15□□□□□ -1.1
MDM2-229ENST00000543046 TSGA10IPQ3SY00 556 aa8.14□□□□□ -1.11
MDM2-229ENST00000543046 TIMELESSQ9UNS1 1208 aa8.14□□□□□ -1.11
MDM2-229ENST00000543046 LILRA1O75019 489 aa8.13□□□□□ -1.11
MDM2-229ENST00000543046 CBLBQ13191 982 aa8.13□□□□□ -1.11
MDM2-229ENST00000543046 PLPP7Q8NBV4 271 aa8.13□□□□□ -1.11
MDM2-229ENST00000543046 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
MDM2-229ENST00000543046 UCN2Q96RP3 112 aa8.13□□□□□ -1.11
MDM2-229ENST00000543046 CDCA7Q9BWT1 371 aaPredicted RBP8.13□□□□□ -1.11
MDM2-229ENST00000543046 CYLDQ9NQC7 956 aa8.13□□□□□ -1.11
MDM2-229ENST00000543046 DACH1Q9UI36 760 aa8.13□□□□□ -1.11
MDM2-229ENST00000543046 CHIC2Q9UKJ5 165 aa8.13□□□□□ -1.11
MDM2-229ENST00000543046 DOLKQ9UPQ8 538 aa8.13□□□□□ -1.11
MDM2-229ENST00000543046 SKIP12755 728 aa8.12□□□□□ -1.11
MDM2-229ENST00000543046 ERVK-9P63128 1117 aa8.12□□□□□ -1.11
MDM2-229ENST00000543046 Q6ZVU0 165 aa8.12□□□□□ -1.11
MDM2-229ENST00000543046 MEIOBQ8N635 442 aa8.12□□□□□ -1.11
MDM2-229ENST00000543046 BMP1P13497 986 aa8.11□□□□□ -1.11
MDM2-229ENST00000543046 ADD1P35611 737 aaKnown RBP8.11□□□□□ -1.11
MDM2-229ENST00000543046 SCTRP47872 440 aa8.11□□□□□ -1.11
MDM2-229ENST00000543046 MAP7D1Q3KQU3 841 aa8.11□□□□□ -1.11
MDM2-229ENST00000543046 CC2D2BQ6DHV5 1058 aa8.11□□□□□ -1.11
MDM2-229ENST00000543046 NFATC2IPQ8NCF5 419 aa8.11□□□□□ -1.11
MDM2-229ENST00000543046 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
MDM2-229ENST00000543046 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
MDM2-229ENST00000543046 MRPL14Q6P1L8 145 aaKnown RBP8.1□□□□□ -1.11
MDM2-229ENST00000543046 TBC1D9Q6ZT07 1266 aa8.1□□□□□ -1.11
MDM2-229ENST00000543046 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
MDM2-229ENST00000543046 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
MDM2-229ENST00000543046 ADH1AP07327 375 aa8.09□□□□□ -1.11
MDM2-229ENST00000543046 USP17L5A8MUK1 530 aa8.08□□□□□ -1.12
MDM2-229ENST00000543046 ATP9BO43861 1147 aa8.08□□□□□ -1.12
MDM2-229ENST00000543046 MYCP01106 439 aaPredicted RBP8.08□□□□□ -1.12
MDM2-229ENST00000543046 USP4Q13107 963 aa8.08□□□□□ -1.12
MDM2-229ENST00000543046 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
MDM2-229ENST00000543046 AGBL1Q96MI9 1066 aa8.08□□□□□ -1.12
MDM2-229ENST00000543046 TSEN34Q9BSV6 310 aaKnown RBP8.08□□□□□ -1.12
MDM2-229ENST00000543046 ESF1Q9H501 851 aaKnown RBP8.08□□□□□ -1.12
MDM2-229ENST00000543046 UPP2O95045 317 aa8.07□□□□□ -1.12
MDM2-229ENST00000543046 SCARF1Q14162 830 aa8.07□□□□□ -1.12
MDM2-229ENST00000543046 SIRT1Q96EB6 747 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms