RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 RAPGEF3O95398 923 aa16.1■□□□□ 0.17
DDX11-223ENST00000542838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.1■□□□□ 0.17
DDX11-223ENST00000542838 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
DDX11-223ENST00000542838 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
DDX11-223ENST00000542838 HMOX1P09601 288 aa16.1■□□□□ 0.17
DDX11-223ENST00000542838 NFE2L2Q16236 605 aa16.1■□□□□ 0.17
DDX11-223ENST00000542838 CDC42BPGQ6DT37 1551 aa16.1■□□□□ 0.17
DDX11-223ENST00000542838 PTMSP20962 102 aa16.1■□□□□ 0.17
DDX11-223ENST00000542838 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
DDX11-223ENST00000542838 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
DDX11-223ENST00000542838 PTCH1Q13635 1447 aa16.09■□□□□ 0.17
DDX11-223ENST00000542838 GAS2L3Q86XJ1 694 aa16.09■□□□□ 0.17
DDX11-223ENST00000542838 POLKQ9UBT6 870 aa16.09■□□□□ 0.17
DDX11-223ENST00000542838 ARHGAP31Q2M1Z3 1444 aa16.09■□□□□ 0.17
DDX11-223ENST00000542838 CALD1Q05682 793 aaKnown RBP16.09■□□□□ 0.17
DDX11-223ENST00000542838 PIK3R4Q99570 1358 aa16.09■□□□□ 0.17
DDX11-223ENST00000542838 SIRT2Q8IXJ6 389 aa16.08■□□□□ 0.17
DDX11-223ENST00000542838 GNAI1P63096 354 aa16.08■□□□□ 0.16
DDX11-223ENST00000542838 ESPNB1AK53 854 aa16.07■□□□□ 0.16
DDX11-223ENST00000542838 TRIM44Q96DX7 344 aaPredicted RBP16.07■□□□□ 0.16
DDX11-223ENST00000542838 ABCC4O15439 1325 aa16.06■□□□□ 0.16
DDX11-223ENST00000542838 CDC45O75419 566 aa16.06■□□□□ 0.16
DDX11-223ENST00000542838 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
DDX11-223ENST00000542838 MAP2P11137 1827 aaKnown RBP16.06■□□□□ 0.16
DDX11-223ENST00000542838 GAS2L2Q8NHY3 880 aa16.06■□□□□ 0.16
DDX11-223ENST00000542838 MBIPQ9NS73 344 aa16.06■□□□□ 0.16
DDX11-223ENST00000542838 SSFA2P28290 1259 aa16.05■□□□□ 0.16
DDX11-223ENST00000542838 DIP2CQ9Y2E4 1556 aa16.05■□□□□ 0.16
DDX11-223ENST00000542838 TMEM131LA2VDJ0 1609 aa16.05■□□□□ 0.16
DDX11-223ENST00000542838 TWISTNBQ3B726 338 aaPredicted RBP16.05■□□□□ 0.16
DDX11-223ENST00000542838 ARHGEF40Q8TER5 1519 aa16.05■□□□□ 0.16
DDX11-223ENST00000542838 GOLGA6L22H0YM25 854 aa16.04■□□□□ 0.16
DDX11-223ENST00000542838 ERBB4Q15303 1308 aa16.04■□□□□ 0.16
DDX11-223ENST00000542838 ZNF853P0CG23 659 aa16.03■□□□□ 0.16
DDX11-223ENST00000542838 API5Q9BZZ5 524 aaKnown RBP16.03■□□□□ 0.16
DDX11-223ENST00000542838 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
DDX11-223ENST00000542838 PREX1Q8TCU6 1659 aa16.03■□□□□ 0.16
DDX11-223ENST00000542838 GSPT1P15170 499 aaKnown RBP16.03■□□□□ 0.16
DDX11-223ENST00000542838 ALKQ9UM73 1620 aa16.02■□□□□ 0.16
DDX11-223ENST00000542838 C8orf58Q8NAV2 365 aa16.02■□□□□ 0.16
DDX11-223ENST00000542838 REREQ9P2R6 1566 aa16.02■□□□□ 0.16
DDX11-223ENST00000542838 AK9Q5TCS8 1911 aa16.01■□□□□ 0.15
DDX11-223ENST00000542838 PLEKHM2Q8IWE5 1019 aa16.01■□□□□ 0.15
DDX11-223ENST00000542838 IL13P35225 146 aa16.01■□□□□ 0.15
DDX11-223ENST00000542838 CFAP44Q96MT7 982 aa16■□□□□ 0.15
DDX11-223ENST00000542838 DDX49Q9Y6V7 483 aaKnown RBP16■□□□□ 0.15
DDX11-223ENST00000542838 BAG4O95429 457 aaKnown RBP16■□□□□ 0.15
DDX11-223ENST00000542838 NEO1Q92859 1461 aa16■□□□□ 0.15
DDX11-223ENST00000542838 LMOD3Q0VAK6 560 aa16■□□□□ 0.15
DDX11-223ENST00000542838 RABEP1Q15276 862 aa16■□□□□ 0.15
DDX11-223ENST00000542838 WAPLQ7Z5K2 1190 aa16■□□□□ 0.15
DDX11-223ENST00000542838 STAG3Q9UJ98 1225 aa16■□□□□ 0.15
DDX11-223ENST00000542838 DLG5Q8TDM6 1919 aa15.99■□□□□ 0.15
DDX11-223ENST00000542838 CLEC17AQ6ZS10 378 aa15.99■□□□□ 0.15
DDX11-223ENST00000542838 ATP7BP35670 1465 aa15.99■□□□□ 0.15
DDX11-223ENST00000542838 DCTPP1Q9H773 170 aa15.99■□□□□ 0.15
DDX11-223ENST00000542838 FAM83GA6ND36 823 aa15.98■□□□□ 0.15
DDX11-223ENST00000542838 KLHL40Q2TBA0 621 aa15.98■□□□□ 0.15
DDX11-223ENST00000542838 TTC22Q5TAA0 569 aa15.98■□□□□ 0.15
DDX11-223ENST00000542838 FBXO31Q5XUX0 539 aaPredicted RBP15.98■□□□□ 0.15
DDX11-223ENST00000542838 KNDC1Q76NI1 1749 aa15.98■□□□□ 0.15
DDX11-223ENST00000542838 NASPP49321 788 aaPredicted RBP15.98■□□□□ 0.15
DDX11-223ENST00000542838 CCDC173Q0VFZ6 552 aa15.97■□□□□ 0.15
DDX11-223ENST00000542838 NME9Q86XW9 330 aa15.97■□□□□ 0.15
DDX11-223ENST00000542838 C16orf71Q8IYS4 520 aaPredicted RBP15.97■□□□□ 0.15
DDX11-223ENST00000542838 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
DDX11-223ENST00000542838 KIF24Q5T7B8 1368 aa15.97■□□□□ 0.15
DDX11-223ENST00000542838 YEATS2Q9ULM3 1422 aa15.97■□□□□ 0.15
DDX11-223ENST00000542838 RIMS2Q9UQ26 1411 aa15.97■□□□□ 0.15
DDX11-223ENST00000542838 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
DDX11-223ENST00000542838 MCTP1Q6DN14 999 aa15.96■□□□□ 0.15
DDX11-223ENST00000542838 ANP32BQ92688 251 aaKnown RBP15.96■□□□□ 0.15
DDX11-223ENST00000542838 USP26Q9BXU7 913 aa15.96■□□□□ 0.15
DDX11-223ENST00000542838 NUCB2P80303 420 aa15.96■□□□□ 0.14
DDX11-223ENST00000542838 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.14
DDX11-223ENST00000542838 CDK12Q9NYV4 1490 aaPredicted RBP15.95■□□□□ 0.14
DDX11-223ENST00000542838 IBTKQ9P2D0 1353 aaPredicted RBP15.94■□□□□ 0.14
DDX11-223ENST00000542838 NCLP19338 710 aaKnown RBP15.94■□□□□ 0.14
DDX11-223ENST00000542838 ANKRD44Q8N8A2 993 aa15.94■□□□□ 0.14
DDX11-223ENST00000542838 PPP1R9BQ96SB3 815 aa15.94■□□□□ 0.14
DDX11-223ENST00000542838 RICTORQ6R327 1708 aa15.94■□□□□ 0.14
DDX11-223ENST00000542838 EDC4Q6P2E9 1401 aaKnown RBP15.94■□□□□ 0.14
DDX11-223ENST00000542838 RRS1Q15050 365 aaKnown RBP15.94■□□□□ 0.14
DDX11-223ENST00000542838 HSP90AA2PQ14568 343 aaPredicted RBP15.93■□□□□ 0.14
DDX11-223ENST00000542838 OTUD7AQ8TE49 926 aaPredicted RBP15.93■□□□□ 0.14
DDX11-223ENST00000542838 APBB1O00213 710 aa15.93■□□□□ 0.14
DDX11-223ENST00000542838 COG3Q96JB2 828 aa15.93■□□□□ 0.14
DDX11-223ENST00000542838 DLC1Q96QB1 1528 aa15.92■□□□□ 0.14
DDX11-223ENST00000542838 CASC1Q6TDU7 716 aa15.92■□□□□ 0.14
DDX11-223ENST00000542838 AATKQ6ZMQ8 1374 aa15.92■□□□□ 0.14
DDX11-223ENST00000542838 CPSF1Q10570 1443 aaKnown RBP15.92■□□□□ 0.14
DDX11-223ENST00000542838 SMARCA5O60264 1052 aaPredicted RBP15.92■□□□□ 0.14
DDX11-223ENST00000542838 SDSP20132 328 aa15.92■□□□□ 0.14
DDX11-223ENST00000542838 CAVIN1Q6NZI2 390 aaKnown RBP15.92■□□□□ 0.14
DDX11-223ENST00000542838 RPAP2Q8IXW5 612 aaPredicted RBP15.92■□□□□ 0.14
DDX11-223ENST00000542838 ATP10DQ9P241 1426 aa15.91■□□□□ 0.14
DDX11-223ENST00000542838 RRP9O43818 475 aaKnown RBP15.91■□□□□ 0.14
DDX11-223ENST00000542838 CYP2E1P05181 493 aaPredicted RBP15.91■□□□□ 0.14
DDX11-223ENST00000542838 PKP1Q13835 747 aa15.91■□□□□ 0.14
DDX11-223ENST00000542838 CEP85Q6P2H3 762 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms