RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 NNTQ13423 1086 aa8.8□□□□□ -1
C12orf56-205ENST00000542397 NBPF14Q5TI25 921 aa8.8□□□□□ -1
C12orf56-205ENST00000542397 CDK15Q96Q40 435 aa8.8□□□□□ -1
C12orf56-205ENST00000542397 CADPSQ9ULU8 1353 aa8.79□□□□□ -1
C12orf56-205ENST00000542397 TRIM47Q96LD4 638 aa8.79□□□□□ -1
C12orf56-205ENST00000542397 CHD1O14646 1710 aa8.79□□□□□ -1
C12orf56-205ENST00000542397 ADH1CP00326 375 aa8.78□□□□□ -1
C12orf56-205ENST00000542397 ARID5BQ14865 1188 aa8.78□□□□□ -1
C12orf56-205ENST00000542397 SH3RF1Q7Z6J0 888 aa8.78□□□□□ -1
C12orf56-205ENST00000542397 LRRN4Q8WUT4 740 aa8.78□□□□□ -1
C12orf56-205ENST00000542397 GPKOWQ92917 476 aaPredicted RBP eCLIP8.78□□□□□ -1
C12orf56-205ENST00000542397 KIFC2Q96AC6 838 aa8.78□□□□□ -1
C12orf56-205ENST00000542397 ZNF608Q9ULD9 1512 aaPredicted RBP8.78□□□□□ -1
C12orf56-205ENST00000542397 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1
C12orf56-205ENST00000542397 URB2Q14146 1524 aaKnown RBP8.77□□□□□ -1.01
C12orf56-205ENST00000542397 SNRPBP14678 240 aaKnown RBP8.77□□□□□ -1.01
C12orf56-205ENST00000542397 SH3BP5LQ7L8J4 393 aa8.77□□□□□ -1.01
C12orf56-205ENST00000542397 TRIM46Q7Z4K8 759 aa8.76□□□□□ -1.01
C12orf56-205ENST00000542397 C1QTNF2Q9BXJ5 285 aa8.76□□□□□ -1.01
C12orf56-205ENST00000542397 PEG3Q9GZU2 1588 aa8.75□□□□□ -1.01
C12orf56-205ENST00000542397 AP1G2O75843 785 aa8.75□□□□□ -1.01
C12orf56-205ENST00000542397 BMP1P13497 986 aa8.75□□□□□ -1.01
C12orf56-205ENST00000542397 GOPCQ9HD26 462 aa8.75□□□□□ -1.01
C12orf56-205ENST00000542397 MROH2BQ7Z745 1585 aa8.74□□□□□ -1.01
C12orf56-205ENST00000542397 TIMP2P16035 220 aa8.74□□□□□ -1.01
C12orf56-205ENST00000542397 GRM5P41594 1212 aa8.74□□□□□ -1.01
C12orf56-205ENST00000542397 WDR4P57081 412 aaKnown RBP8.74□□□□□ -1.01
C12orf56-205ENST00000542397 NR5A1Q13285 461 aa8.74□□□□□ -1.01
C12orf56-205ENST00000542397 NR6A1Q15406 480 aa8.74□□□□□ -1.01
C12orf56-205ENST00000542397 KLF16Q9BXK1 252 aaPredicted RBP8.74□□□□□ -1.01
C12orf56-205ENST00000542397 FKBPLQ9UIM3 349 aa8.74□□□□□ -1.01
C12orf56-205ENST00000542397 MAGEB6P1A0A0J9YX57 407 aa8.73□□□□□ -1.01
C12orf56-205ENST00000542397 PDXDC2PQ6P474 469 aa8.73□□□□□ -1.01
C12orf56-205ENST00000542397 TRMT44Q8IYL2 757 aaKnown RBP8.73□□□□□ -1.01
C12orf56-205ENST00000542397 NR3C2P08235 984 aa8.72□□□□□ -1.01
C12orf56-205ENST00000542397 RFC5P40937 340 aa8.72□□□□□ -1.01
C12orf56-205ENST00000542397 PCMTD1Q96MG8 357 aaPredicted RBP8.72□□□□□ -1.01
C12orf56-205ENST00000542397 CARD14Q9BXL6 1004 aa8.72□□□□□ -1.01
C12orf56-205ENST00000542397 MAP4K5Q9Y4K4 846 aa8.72□□□□□ -1.01
C12orf56-205ENST00000542397 EIF4G3O43432 1585 aaKnown RBP8.71□□□□□ -1.02
C12orf56-205ENST00000542397 IL27Q8NEV9 243 aa8.71□□□□□ -1.02
C12orf56-205ENST00000542397 ZC3H4Q9UPT8 1303 aaKnown RBP8.71□□□□□ -1.02
C12orf56-205ENST00000542397 ZIC2O95409 532 aaPredicted RBP8.7□□□□□ -1.02
C12orf56-205ENST00000542397 USP17L8P0C7I0 530 aa8.7□□□□□ -1.02
C12orf56-205ENST00000542397 ERFEQ4G0M1 354 aa8.7□□□□□ -1.02
C12orf56-205ENST00000542397 VASH1Q7L8A9 365 aaPredicted RBP8.7□□□□□ -1.02
C12orf56-205ENST00000542397 HOMEZQ8IX15 550 aa8.7□□□□□ -1.02
C12orf56-205ENST00000542397 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
C12orf56-205ENST00000542397 ARHGAP9Q9BRR9 750 aa8.7□□□□□ -1.02
C12orf56-205ENST00000542397 FSHRP23945 695 aa8.69□□□□□ -1.02
C12orf56-205ENST00000542397 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
C12orf56-205ENST00000542397 ITPKCQ96DU7 683 aa8.69□□□□□ -1.02
C12orf56-205ENST00000542397 ZFAND3Q9H8U3 227 aa8.69□□□□□ -1.02
C12orf56-205ENST00000542397 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
C12orf56-205ENST00000542397 HMX1Q9NP08 348 aaPredicted RBP8.68□□□□□ -1.02
C12orf56-205ENST00000542397 PTK2Q05397 1052 aa8.67□□□□□ -1.02
C12orf56-205ENST00000542397 SCARF1Q14162 830 aa8.67□□□□□ -1.02
C12orf56-205ENST00000542397 ZBTB33Q86T24 672 aa8.67□□□□□ -1.02
C12orf56-205ENST00000542397 PNMA1Q8ND90 353 aa8.67□□□□□ -1.02
C12orf56-205ENST00000542397 GPSM3Q9Y4H4 160 aa8.67□□□□□ -1.02
C12orf56-205ENST00000542397 TERTO14746 1132 aaKnown RBP8.66□□□□□ -1.02
C12orf56-205ENST00000542397 TMEM259Q4ZIN3 620 aa8.66□□□□□ -1.02
C12orf56-205ENST00000542397 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
C12orf56-205ENST00000542397 WIZO95785 1651 aa8.65□□□□□ -1.02
C12orf56-205ENST00000542397 CCDC116Q8IYX3 515 aa8.65□□□□□ -1.02
C12orf56-205ENST00000542397 SLC10A4Q96EP9 437 aa8.65□□□□□ -1.02
C12orf56-205ENST00000542397 OCSTAMPQ9BR26 566 aa8.65□□□□□ -1.02
C12orf56-205ENST00000542397 CDV3Q9UKY7 258 aaKnown RBP8.65□□□□□ -1.02
C12orf56-205ENST00000542397 EMILIN1Q9Y6C2 1016 aa8.65□□□□□ -1.02
C12orf56-205ENST00000542397 MEIOBQ8N635 442 aa8.63□□□□□ -1.03
C12orf56-205ENST00000542397 ADAM32Q8TC27 787 aa8.63□□□□□ -1.03
C12orf56-205ENST00000542397 KCTD15Q96SI1 283 aaPredicted RBP8.63□□□□□ -1.03
C12orf56-205ENST00000542397 IFT140Q96RY7 1462 aa8.63□□□□□ -1.03
C12orf56-205ENST00000542397 RSF1Q96T23 1441 aaPredicted RBP8.63□□□□□ -1.03
C12orf56-205ENST00000542397 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
C12orf56-205ENST00000542397 TRIM34Q9BYJ4 488 aa8.62□□□□□ -1.03
C12orf56-205ENST00000542397 NXF1Q9UBU9 619 aaKnown RBP8.62□□□□□ -1.03
C12orf56-205ENST00000542397 UPP2O95045 317 aa8.61□□□□□ -1.03
C12orf56-205ENST00000542397 PPP1R26Q5T8A7 1209 aaPredicted RBP8.61□□□□□ -1.03
C12orf56-205ENST00000542397 AQRO60306 1485 aaKnown RBP eCLIP8.6□□□□□ -1.03
C12orf56-205ENST00000542397 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
C12orf56-205ENST00000542397 NPAS3Q8IXF0 933 aa8.6□□□□□ -1.03
C12orf56-205ENST00000542397 LINC00528Q8N1L1 170 aa8.6□□□□□ -1.03
C12orf56-205ENST00000542397 SLC16A10Q8TF71 515 aa8.6□□□□□ -1.03
C12orf56-205ENST00000542397 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
C12orf56-205ENST00000542397 CFTRP13569 1480 aa8.59□□□□□ -1.03
C12orf56-205ENST00000542397 BMP2P12643 396 aa8.59□□□□□ -1.03
C12orf56-205ENST00000542397 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
C12orf56-205ENST00000542397 DHX9Q08211 1270 aaKnown RBP8.58□□□□□ -1.04
C12orf56-205ENST00000542397 INTS6LQ5JSJ4 861 aaKnown RBP8.58□□□□□ -1.04
C12orf56-205ENST00000542397 GJD4Q96KN9 370 aaPredicted RBP8.58□□□□□ -1.04
C12orf56-205ENST00000542397 TSEN34Q9BSV6 310 aaKnown RBP8.58□□□□□ -1.04
C12orf56-205ENST00000542397 SOBPA7XYQ1 873 aa8.57□□□□□ -1.04
C12orf56-205ENST00000542397 SUPT5HO00267 1087 aaKnown RBP8.57□□□□□ -1.04
C12orf56-205ENST00000542397 NBPF20Q3BBV1 942 aa8.57□□□□□ -1.04
C12orf56-205ENST00000542397 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
C12orf56-205ENST00000542397 CLASP1Q7Z460 1538 aa8.57□□□□□ -1.04
C12orf56-205ENST00000542397 MAN1A2O60476 641 aa8.56□□□□□ -1.04
C12orf56-205ENST00000542397 CBLBQ13191 982 aa8.56□□□□□ -1.04
C12orf56-205ENST00000542397 Q6ZVU0 165 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms