RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 PTPROQ16827 1216 aa7.61□□□□□ -1.19
DDB1-219ENST00000541513 MAGEC2Q9UBF1 373 aaPredicted RBP7.61□□□□□ -1.19
DDB1-219ENST00000541513 ADAMTS12P58397 1594 aa7.61□□□□□ -1.19
DDB1-219ENST00000541513 SNAPC4Q5SXM2 1469 aa7.61□□□□□ -1.19
DDB1-219ENST00000541513 CHD1O14646 1710 aa7.61□□□□□ -1.19
DDB1-219ENST00000541513 CUL7Q14999 1698 aa7.6□□□□□ -1.19
DDB1-219ENST00000541513 PSME1Q06323 249 aa7.6□□□□□ -1.19
DDB1-219ENST00000541513 PLEKHM2Q8IWE5 1019 aa7.6□□□□□ -1.19
DDB1-219ENST00000541513 SPACA7Q96KW9 195 aa7.6□□□□□ -1.19
DDB1-219ENST00000541513 PCDHB15Q9Y5E8 787 aa7.6□□□□□ -1.19
DDB1-219ENST00000541513 hCG_2014768A0A024R1R8 64 aa7.59□□□□□ -1.19
DDB1-219ENST00000541513 PHF14O94880 888 aa7.59□□□□□ -1.19
DDB1-219ENST00000541513 FAM161AQ3B820 660 aa7.59□□□□□ -1.19
DDB1-219ENST00000541513 CCDC144BQ3MJ40 725 aa7.59□□□□□ -1.19
DDB1-219ENST00000541513 ZNF687Q8N1G0 1237 aa7.59□□□□□ -1.19
DDB1-219ENST00000541513 PRKAG2Q9UGJ0 569 aa7.59□□□□□ -1.19
DDB1-219ENST00000541513 SYNJ2O15056 1496 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 NUTM2BA6NNL0 878 aaPredicted RBP7.58□□□□□ -1.2
DDB1-219ENST00000541513 NUTM2EB1AL46 878 aaPredicted RBP7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L15C9J2P7 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L10C9JJH3 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L13C9JLJ4 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L12C9JPN9 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L11C9JVI0 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L21D6R901 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L18D6R9N7 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L22D6RA61 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L17D6RBQ6 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L19D6RCP7 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L20D6RJB6 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 MAP3K7O43318 606 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 ATP2B4P23634 1241 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 USP17L24Q0WX57 530 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 LDLRAD1Q5T700 205 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 NUTM2DQ5VT03 806 aaPredicted RBP7.58□□□□□ -1.2
DDB1-219ENST00000541513 NUTM1Q86Y26 1132 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 NUTM2AQ8IVF1 878 aaPredicted RBP7.58□□□□□ -1.2
DDB1-219ENST00000541513 TTC13Q8NBP0 860 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 ZBTB3Q9H5J0 574 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 ANO8Q9HCE9 1232 aaPredicted RBP7.58□□□□□ -1.2
DDB1-219ENST00000541513 KLHL42Q9P2K6 505 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 EEA1Q15075 1411 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 IGF1RP08069 1367 aa7.58□□□□□ -1.2
DDB1-219ENST00000541513 ATP2B1P20020 1258 aa7.57□□□□□ -1.2
DDB1-219ENST00000541513 FOSBP53539 338 aa7.57□□□□□ -1.2
DDB1-219ENST00000541513 METTL16Q86W50 562 aaKnown RBP7.57□□□□□ -1.2
DDB1-219ENST00000541513 NLGN1Q8N2Q7 840 aa7.57□□□□□ -1.2
DDB1-219ENST00000541513 CABLES1Q8TDN4 633 aa7.57□□□□□ -1.2
DDB1-219ENST00000541513 GMLQ99445 158 aa7.57□□□□□ -1.2
DDB1-219ENST00000541513 FHAD1B1AJZ9 1412 aa7.57□□□□□ -1.2
DDB1-219ENST00000541513 RUSC2Q8N2Y8 1516 aa7.57□□□□□ -1.2
DDB1-219ENST00000541513 USP17L3A6NCW0 530 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 USP17L4A6NCW7 530 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 EIF4G2P78344 907 aaKnown RBP eCLIP7.56□□□□□ -1.2
DDB1-219ENST00000541513 SWI5Q1ZZU3 235 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 USP17L2Q6R6M4 530 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 USP17L1Q7RTZ2 530 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 RNF135Q8IUD6 432 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 ZSCAN29Q8IWY8 852 aaPredicted RBP7.56□□□□□ -1.2
DDB1-219ENST00000541513 CERKQ8TCT0 537 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 MORC4Q8TE76 937 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 DCTN4Q9UJW0 460 aa7.56□□□□□ -1.2
DDB1-219ENST00000541513 NDUFV2P19404 249 aa7.55□□□□□ -1.2
DDB1-219ENST00000541513 CTDSPL2Q05D32 466 aa7.55□□□□□ -1.2
DDB1-219ENST00000541513 RBL2Q08999 1139 aa7.55□□□□□ -1.2
DDB1-219ENST00000541513 DOK7Q18PE1 504 aa7.55□□□□□ -1.2
DDB1-219ENST00000541513 EAPPQ56P03 285 aaPredicted RBP7.55□□□□□ -1.2
DDB1-219ENST00000541513 DHX38Q92620 1227 aaKnown RBP7.55□□□□□ -1.2
DDB1-219ENST00000541513 PLA2G2EQ9NZK7 142 aa7.55□□□□□ -1.2
DDB1-219ENST00000541513 NOP58Q9Y2X3 529 aaKnown RBP7.55□□□□□ -1.2
DDB1-219ENST00000541513 GRIN2AQ12879 1464 aa7.55□□□□□ -1.2
DDB1-219ENST00000541513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.54□□□□□ -1.2
DDB1-219ENST00000541513 PPP1R3GB7ZBB8 358 aa7.54□□□□□ -1.2
DDB1-219ENST00000541513 ICMTO60725 284 aa7.54□□□□□ -1.2
DDB1-219ENST00000541513 PARNO95453 639 aaKnown RBP7.54□□□□□ -1.2
DDB1-219ENST00000541513 IBSPP21815 317 aaPredicted RBP7.54□□□□□ -1.2
DDB1-219ENST00000541513 PTK7Q13308 1070 aa7.54□□□□□ -1.2
DDB1-219ENST00000541513 CRTC2Q53ET0 693 aaPredicted RBP7.54□□□□□ -1.2
DDB1-219ENST00000541513 PADI6Q6TGC4 694 aa7.54□□□□□ -1.2
DDB1-219ENST00000541513 ZCRB1Q8TBF4 217 aaKnown RBP7.54□□□□□ -1.2
DDB1-219ENST00000541513 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
DDB1-219ENST00000541513 PIF1Q9H611 641 aa7.54□□□□□ -1.2
DDB1-219ENST00000541513 METTL5Q9NRN9 209 aaKnown RBP7.54□□□□□ -1.2
DDB1-219ENST00000541513 CARMIL1Q5VZK9 1371 aa7.54□□□□□ -1.2
DDB1-219ENST00000541513 CCDC194A0A1B0GVG4 234 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 MAPK1P28482 360 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 HSP90AB4PQ58FF6 505 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 NT5DC4Q86YG4 428 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 TEX2Q8IWB9 1127 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 SULF1Q8IWU6 871 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 SMC5Q8IY18 1101 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 RGL4Q8IZJ4 473 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 PNMA1Q8ND90 353 aa7.53□□□□□ -1.2
DDB1-219ENST00000541513 PRXQ9BXM0 1461 aa7.52□□□□□ -1.21
DDB1-219ENST00000541513 EIF3JO75822 258 aaKnown RBP7.52□□□□□ -1.21
DDB1-219ENST00000541513 ANAPC15P60006 121 aa7.52□□□□□ -1.21
DDB1-219ENST00000541513 TCEAL1Q15170 157 aa7.52□□□□□ -1.21
DDB1-219ENST00000541513 HSP90AB2PQ58FF8 381 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms