RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 DCCP43146 1447 aa6.98□□□□□ -1.29
SPARCL1-209ENST00000541496 ADGRL3Q9HAR2 1447 aa6.98□□□□□ -1.29
SPARCL1-209ENST00000541496 LTBP4Q8N2S1 1624 aa6.98□□□□□ -1.29
SPARCL1-209ENST00000541496 LRRC7Q96NW7 1537 aa6.97□□□□□ -1.29
SPARCL1-209ENST00000541496 WASLO00401 505 aaPredicted RBP6.97□□□□□ -1.29
SPARCL1-209ENST00000541496 TMF1P82094 1093 aa6.97□□□□□ -1.29
SPARCL1-209ENST00000541496 CDCA8Q53HL2 280 aa6.97□□□□□ -1.29
SPARCL1-209ENST00000541496 PLPP6Q8IY26 295 aa6.97□□□□□ -1.29
SPARCL1-209ENST00000541496 EVC2Q86UK5 1308 aa6.97□□□□□ -1.29
SPARCL1-209ENST00000541496 DSG2Q14126 1118 aa6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 SAFB2Q14151 953 aaKnown RBP eCLIP6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 MFSD10Q14728 455 aa6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 PPP1R15BQ5SWA1 713 aa6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 CADPS2Q86UW7 1296 aa6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 DDX27Q96GQ7 796 aaKnown RBP6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 MINK1Q8N4C8 1332 aaPredicted RBP6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 KNDC1Q76NI1 1749 aa6.96□□□□□ -1.3
SPARCL1-209ENST00000541496 MSH6P52701 1360 aa6.95□□□□□ -1.3
SPARCL1-209ENST00000541496 ANKARQ7Z5J8 1434 aa6.95□□□□□ -1.3
SPARCL1-209ENST00000541496 LARP6Q9BRS8 491 aaKnown RBP6.95□□□□□ -1.3
SPARCL1-209ENST00000541496 CDK19Q9BWU1 502 aa6.95□□□□□ -1.3
SPARCL1-209ENST00000541496 IQSEC2Q5JU85 1478 aa6.95□□□□□ -1.3
SPARCL1-209ENST00000541496 ADGRB2O60241 1585 aa6.95□□□□□ -1.3
SPARCL1-209ENST00000541496 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
SPARCL1-209ENST00000541496 DISP3Q9P2K9 1392 aa6.95□□□□□ -1.3
SPARCL1-209ENST00000541496 NINLQ9Y2I6 1382 aa6.95□□□□□ -1.3
SPARCL1-209ENST00000541496 C11orf95C9JLR9 678 aaPredicted RBP6.94□□□□□ -1.3
SPARCL1-209ENST00000541496 TBC1D12O60347 775 aa6.94□□□□□ -1.3
SPARCL1-209ENST00000541496 VARS2Q5ST30 1063 aaKnown RBP6.94□□□□□ -1.3
SPARCL1-209ENST00000541496 C14orf37Q86TY3 774 aa6.94□□□□□ -1.3
SPARCL1-209ENST00000541496 RBM33Q96EV2 1170 aaKnown RBP6.94□□□□□ -1.3
SPARCL1-209ENST00000541496 HIRIP3Q9BW71 556 aaPredicted RBP6.94□□□□□ -1.3
SPARCL1-209ENST00000541496 CDC42BPGQ6DT37 1551 aa6.94□□□□□ -1.3
SPARCL1-209ENST00000541496 TULP4Q9NRJ4 1543 aa6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 CHD2O14647 1828 aaKnown RBP6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 ZNF316A6NFI3 1004 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 ATF3P18847 181 aa6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 SRPK2P78362 688 aaKnown RBP6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 PLCB2Q00722 1185 aa6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 GPR153Q6NV75 609 aa6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 CERKQ8TCT0 537 aa6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 PTCD2Q8WV60 388 aaKnown RBP6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 KIF7Q2M1P5 1343 aa6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 WASHC2AQ641Q2 1341 aa6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 CCDC7Q96M83 1385 aa6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 ARHGEF28Q8N1W1 1705 aaKnown RBP6.93□□□□□ -1.3
SPARCL1-209ENST00000541496 PLEKHG3A1L390 1219 aa6.92□□□□□ -1.3
SPARCL1-209ENST00000541496 NUDT16Q96DE0 195 aaKnown RBP6.92□□□□□ -1.3
SPARCL1-209ENST00000541496 PRR36Q9H6K5 1346 aa6.92□□□□□ -1.3
SPARCL1-209ENST00000541496 MST1RQ04912 1400 aa6.92□□□□□ -1.3
SPARCL1-209ENST00000541496 ATP7BP35670 1465 aa6.92□□□□□ -1.3
SPARCL1-209ENST00000541496 C1orf167Q5SNV9 1468 aa6.92□□□□□ -1.3
SPARCL1-209ENST00000541496 ARSIQ5FYB1 569 aa6.91□□□□□ -1.3
SPARCL1-209ENST00000541496 SLAIN2Q9P270 581 aa6.91□□□□□ -1.3
SPARCL1-209ENST00000541496 PCDHGA4Q9Y5G9 962 aa6.91□□□□□ -1.3
SPARCL1-209ENST00000541496 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.9□□□□□ -1.3
SPARCL1-209ENST00000541496 TOM1O60784 492 aa6.9□□□□□ -1.3
SPARCL1-209ENST00000541496 WDR70Q9NW82 654 aa6.9□□□□□ -1.3
SPARCL1-209ENST00000541496 POLR3AO14802 1390 aaPredicted RBP6.9□□□□□ -1.31
SPARCL1-209ENST00000541496 STRCP1A6NGW2 1772 aa6.9□□□□□ -1.31
SPARCL1-209ENST00000541496 OXER1Q8TDS5 423 aa6.89□□□□□ -1.31
SPARCL1-209ENST00000541496 SLC12A5Q9H2X9 1139 aa6.89□□□□□ -1.31
SPARCL1-209ENST00000541496 CABP1Q9NZU7 370 aa6.89□□□□□ -1.31
SPARCL1-209ENST00000541496 BRD4O60885 1362 aaPredicted RBP6.89□□□□□ -1.31
SPARCL1-209ENST00000541496 ANKRD36BQ8N2N9 1353 aa6.89□□□□□ -1.31
SPARCL1-209ENST00000541496 CPSF1Q10570 1443 aaKnown RBP6.89□□□□□ -1.31
SPARCL1-209ENST00000541496 QRICH2Q9H0J4 1663 aa6.88□□□□□ -1.31
SPARCL1-209ENST00000541496 PPIP5K1Q6PFW1 1433 aa6.88□□□□□ -1.31
SPARCL1-209ENST00000541496 PSDA5PKW4 1024 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-209ENST00000541496 ESCO1Q5FWF5 840 aa6.88□□□□□ -1.31
SPARCL1-209ENST00000541496 BRINP3Q76B58 766 aa6.88□□□□□ -1.31
SPARCL1-209ENST00000541496 KHSRPQ92945 711 aaKnown RBP eCLIP6.88□□□□□ -1.31
SPARCL1-209ENST00000541496 ORAI2Q96SN7 254 aa6.88□□□□□ -1.31
SPARCL1-209ENST00000541496 TERF2IPQ9NYB0 399 aa6.88□□□□□ -1.31
SPARCL1-209ENST00000541496 CD163L1Q9NR16 1453 aa6.87□□□□□ -1.31
SPARCL1-209ENST00000541496 ACEP12821 1306 aa6.87□□□□□ -1.31
SPARCL1-209ENST00000541496 NPHP3Q7Z494 1330 aa6.87□□□□□ -1.31
SPARCL1-209ENST00000541496 NUTM2FA1L443 756 aa6.87□□□□□ -1.31
SPARCL1-209ENST00000541496 CAMK2BQ13554 666 aa6.87□□□□□ -1.31
SPARCL1-209ENST00000541496 HDGFL2Q7Z4V5 671 aaPredicted RBP6.87□□□□□ -1.31
SPARCL1-209ENST00000541496 TMC1Q8TDI8 760 aa6.87□□□□□ -1.31
SPARCL1-209ENST00000541496 NALCNQ8IZF0 1738 aa6.87□□□□□ -1.31
SPARCL1-209ENST00000541496 SSH2Q76I76 1423 aa6.86□□□□□ -1.31
SPARCL1-209ENST00000541496 A0A1W2PP64 1363 aa6.86□□□□□ -1.31
SPARCL1-209ENST00000541496 UBAP1LF5GYI3 381 aa6.86□□□□□ -1.31
SPARCL1-209ENST00000541496 PER1O15534 1290 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-209ENST00000541496 FOXO3O43524 673 aa6.86□□□□□ -1.31
SPARCL1-209ENST00000541496 NGDNQ8NEJ9 315 aaKnown RBP6.86□□□□□ -1.31
SPARCL1-209ENST00000541496 PMFBP1Q8TBY8 1022 aa6.86□□□□□ -1.31
SPARCL1-209ENST00000541496 CARD14Q9BXL6 1004 aa6.86□□□□□ -1.31
SPARCL1-209ENST00000541496 PANK3Q9H999 370 aa6.86□□□□□ -1.31
SPARCL1-209ENST00000541496 USP6P35125 1406 aa6.85□□□□□ -1.31
SPARCL1-209ENST00000541496 EDC4Q6P2E9 1401 aaKnown RBP6.85□□□□□ -1.31
SPARCL1-209ENST00000541496 NPC1L1Q9UHC9 1359 aa6.85□□□□□ -1.31
SPARCL1-209ENST00000541496 FMN2Q9NZ56 1722 aa6.85□□□□□ -1.31
SPARCL1-209ENST00000541496 SOS2Q07890 1332 aaPredicted RBP6.85□□□□□ -1.31
SPARCL1-209ENST00000541496 NUDT7P0C024 238 aa6.85□□□□□ -1.31
SPARCL1-209ENST00000541496 PSME1Q06323 249 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms