RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 TRPM2O94759 1503 aa8.34□□□□□ -1.07
CDKN3-206ENST00000541304 GGT6Q6P531 493 aa8.34□□□□□ -1.07
CDKN3-206ENST00000541304 PRR14Q9BWN1 585 aa8.34□□□□□ -1.07
CDKN3-206ENST00000541304 TIMELESSQ9UNS1 1208 aa8.34□□□□□ -1.07
CDKN3-206ENST00000541304 NEURL4Q96JN8 1562 aa8.34□□□□□ -1.07
CDKN3-206ENST00000541304 PTPRTO14522 1441 aa8.33□□□□□ -1.08
CDKN3-206ENST00000541304 CCER1Q8TC90 406 aaPredicted RBP8.33□□□□□ -1.08
CDKN3-206ENST00000541304 TMEM134Q9H6X4 195 aa8.33□□□□□ -1.08
CDKN3-206ENST00000541304 CEP152O94986 1710 aa8.32□□□□□ -1.08
CDKN3-206ENST00000541304 SIGLEC1Q9BZZ2 1709 aa8.32□□□□□ -1.08
CDKN3-206ENST00000541304 CCDC144AA2RUR9 1427 aa8.32□□□□□ -1.08
CDKN3-206ENST00000541304 NPATQ14207 1427 aa8.32□□□□□ -1.08
CDKN3-206ENST00000541304 ZEB1P37275 1124 aaPredicted RBP8.32□□□□□ -1.08
CDKN3-206ENST00000541304 HIC1Q14526 733 aa8.32□□□□□ -1.08
CDKN3-206ENST00000541304 E9PCH4 1651 aa8.32□□□□□ -1.08
CDKN3-206ENST00000541304 ADAMTSL3P82987 1691 aa8.32□□□□□ -1.08
CDKN3-206ENST00000541304 FER1L4A9Z1Z3 1794 aa8.32□□□□□ -1.08
CDKN3-206ENST00000541304 SPATA31D1Q6ZQQ2 1576 aa8.31□□□□□ -1.08
CDKN3-206ENST00000541304 NOS1P29475 1434 aa8.31□□□□□ -1.08
CDKN3-206ENST00000541304 ANKRD30BQ9BXX2 1392 aa8.31□□□□□ -1.08
CDKN3-206ENST00000541304 SPHKAPQ2M3C7 1700 aa8.31□□□□□ -1.08
CDKN3-206ENST00000541304 CLTCQ00610 1675 aaKnown RBP8.3□□□□□ -1.08
CDKN3-206ENST00000541304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.3□□□□□ -1.08
CDKN3-206ENST00000541304 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
CDKN3-206ENST00000541304 FAM161AQ3B820 660 aa8.3□□□□□ -1.08
CDKN3-206ENST00000541304 RBM26Q5T8P6 1007 aaKnown RBP8.3□□□□□ -1.08
CDKN3-206ENST00000541304 SLC52A1Q9NWF4 448 aa8.3□□□□□ -1.08
CDKN3-206ENST00000541304 ERVK-7P63135 1459 aa8.3□□□□□ -1.08
CDKN3-206ENST00000541304 COPS2P61201 443 aa8.29□□□□□ -1.08
CDKN3-206ENST00000541304 ZMYM3Q14202 1370 aa8.29□□□□□ -1.08
CDKN3-206ENST00000541304 NLRP1Q9C000 1473 aa8.29□□□□□ -1.08
CDKN3-206ENST00000541304 KDM5AP29375 1690 aaKnown RBP8.29□□□□□ -1.08
CDKN3-206ENST00000541304 PREX1Q8TCU6 1659 aa8.29□□□□□ -1.08
CDKN3-206ENST00000541304 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
CDKN3-206ENST00000541304 PCDHB3Q9Y5E6 796 aa8.28□□□□□ -1.08
CDKN3-206ENST00000541304 PIK3C2BO00750 1634 aa8.28□□□□□ -1.08
CDKN3-206ENST00000541304 MADDQ8WXG6 1647 aa8.28□□□□□ -1.08
CDKN3-206ENST00000541304 OATP04181 439 aa8.27□□□□□ -1.09
CDKN3-206ENST00000541304 KMT5BQ4FZB7 885 aa8.27□□□□□ -1.09
CDKN3-206ENST00000541304 PXYLP1Q8TE99 480 aa8.27□□□□□ -1.09
CDKN3-206ENST00000541304 TONSLQ96HA7 1378 aa8.26□□□□□ -1.09
CDKN3-206ENST00000541304 GNPATO15228 680 aa8.26□□□□□ -1.09
CDKN3-206ENST00000541304 GPR37O15354 613 aa8.26□□□□□ -1.09
CDKN3-206ENST00000541304 CFHP08603 1231 aa8.26□□□□□ -1.09
CDKN3-206ENST00000541304 MLECQ14165 292 aa8.26□□□□□ -1.09
CDKN3-206ENST00000541304 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
CDKN3-206ENST00000541304 METTL3Q86U44 580 aaKnown RBP8.26□□□□□ -1.09
CDKN3-206ENST00000541304 PLA2R1Q13018 1463 aa8.26□□□□□ -1.09
CDKN3-206ENST00000541304 TNRQ92752 1358 aa8.25□□□□□ -1.09
CDKN3-206ENST00000541304 ADGRB3O60242 1522 aa8.25□□□□□ -1.09
CDKN3-206ENST00000541304 C3P01024 1663 aa8.25□□□□□ -1.09
CDKN3-206ENST00000541304 ZPR1O75312 459 aa8.25□□□□□ -1.09
CDKN3-206ENST00000541304 GGCXP38435 758 aa8.25□□□□□ -1.09
CDKN3-206ENST00000541304 Q6ZNB5 142 aa8.25□□□□□ -1.09
CDKN3-206ENST00000541304 KDM2AQ9Y2K7 1162 aa8.25□□□□□ -1.09
CDKN3-206ENST00000541304 SYNMO15061 1565 aa8.25□□□□□ -1.09
CDKN3-206ENST00000541304 RIMS1Q86UR5 1692 aaKnown RBP8.24□□□□□ -1.09
CDKN3-206ENST00000541304 BLOC1S3Q6QNY0 202 aa8.24□□□□□ -1.09
CDKN3-206ENST00000541304 GPIHBP1Q8IV16 184 aa8.24□□□□□ -1.09
CDKN3-206ENST00000541304 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.24□□□□□ -1.09
CDKN3-206ENST00000541304 CLTCL1P53675 1640 aa8.24□□□□□ -1.09
CDKN3-206ENST00000541304 PTPRMP28827 1452 aa8.24□□□□□ -1.09
CDKN3-206ENST00000541304 RPGRIP1LQ68CZ1 1315 aa8.24□□□□□ -1.09
CDKN3-206ENST00000541304 SPATA31E1Q6ZUB1 1445 aa8.23□□□□□ -1.09
CDKN3-206ENST00000541304 ACTN4O43707 911 aaKnown RBP8.23□□□□□ -1.09
CDKN3-206ENST00000541304 MYOM2P54296 1465 aa8.23□□□□□ -1.09
CDKN3-206ENST00000541304 ZNF142P52746 1687 aaPredicted RBP8.23□□□□□ -1.09
CDKN3-206ENST00000541304 KIF1BO60333 1816 aa8.22□□□□□ -1.09
CDKN3-206ENST00000541304 MYO3AQ8NEV4 1616 aa8.22□□□□□ -1.09
CDKN3-206ENST00000541304 A2ML1A8K2U0 1454 aa8.22□□□□□ -1.09
CDKN3-206ENST00000541304 VSIG10Q8N0Z9 540 aa8.22□□□□□ -1.09
CDKN3-206ENST00000541304 NKX2-3Q8TAU0 364 aa8.22□□□□□ -1.09
CDKN3-206ENST00000541304 UHRF1BP1Q6BDS2 1440 aa8.21□□□□□ -1.09
CDKN3-206ENST00000541304 SLC10A3P09131 477 aa8.21□□□□□ -1.1
CDKN3-206ENST00000541304 FECHP22830 423 aa8.21□□□□□ -1.1
CDKN3-206ENST00000541304 PRKD2Q9BZL6 878 aa8.21□□□□□ -1.1
CDKN3-206ENST00000541304 V9GY48 417 aaPredicted RBP8.21□□□□□ -1.1
CDKN3-206ENST00000541304 TMEM131LA2VDJ0 1609 aa8.21□□□□□ -1.1
CDKN3-206ENST00000541304 ZFYVE9O95405 1425 aa8.2□□□□□ -1.1
CDKN3-206ENST00000541304 UGGT1Q9NYU2 1555 aa8.2□□□□□ -1.1
CDKN3-206ENST00000541304 CEP170BQ9Y4F5 1589 aaPredicted RBP8.2□□□□□ -1.1
CDKN3-206ENST00000541304 TULP1O00294 542 aaPredicted RBP8.2□□□□□ -1.1
CDKN3-206ENST00000541304 TLL1O43897 1013 aa8.2□□□□□ -1.1
CDKN3-206ENST00000541304 LAPTM4AQ15012 233 aa8.19□□□□□ -1.1
CDKN3-206ENST00000541304 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDKN3-206ENST00000541304 TMUB1Q9BVT8 246 aa8.19□□□□□ -1.1
CDKN3-206ENST00000541304 SLIT1O75093 1534 aa8.19□□□□□ -1.1
CDKN3-206ENST00000541304 LAMC1P11047 1609 aa8.18□□□□□ -1.1
CDKN3-206ENST00000541304 IDI1Q13907 227 aa8.18□□□□□ -1.1
CDKN3-206ENST00000541304 UBR1Q8IWV7 1749 aa8.17□□□□□ -1.1
CDKN3-206ENST00000541304 NR1I2O75469 434 aa8.17□□□□□ -1.1
CDKN3-206ENST00000541304 NEUROD1Q13562 356 aa8.17□□□□□ -1.1
CDKN3-206ENST00000541304 FBXO31Q5XUX0 539 aaPredicted RBP8.17□□□□□ -1.1
CDKN3-206ENST00000541304 THEMISQ8N1K5 641 aaPredicted RBP8.17□□□□□ -1.1
CDKN3-206ENST00000541304 TMEM2Q9UHN6 1383 aa8.17□□□□□ -1.1
CDKN3-206ENST00000541304 ARHGAP23Q9P227 1491 aa8.17□□□□□ -1.1
CDKN3-206ENST00000541304 NRXN1Q9ULB1 1477 aa8.17□□□□□ -1.1
CDKN3-206ENST00000541304 NEXMIFQ5QGS0 1516 aa8.17□□□□□ -1.1
CDKN3-206ENST00000541304 IFT172Q9UG01 1749 aa8.17□□□□□ -1.1
CDKN3-206ENST00000541304 SETD1BQ9UPS6 1966 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms