RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 NINLQ9Y2I6 1382 aa38.63■■■■□ 3.77
CHFR-218ENST00000540963 ZBTB7CA1YPR0 619 aa38.63■■■■□ 3.77
CHFR-218ENST00000540963 ZNF692Q9BU19 519 aaPredicted RBP38.62■■■■□ 3.77
CHFR-218ENST00000540963 BCL11BQ9C0K0 894 aaPredicted RBP38.62■■■■□ 3.77
CHFR-218ENST00000540963 PPP1R1BQ9UD71 204 aaPredicted RBP38.62■■■■□ 3.77
CHFR-218ENST00000540963 TRPM1Q7Z4N2 1603 aa38.62■■■■□ 3.77
CHFR-218ENST00000540963 KCNH5Q8NCM2 988 aa38.6■■■■□ 3.77
CHFR-218ENST00000540963 CPSF1Q10570 1443 aaKnown RBP38.6■■■■□ 3.77
CHFR-218ENST00000540963 AKAP12Q02952 1782 aa38.59■■■■□ 3.77
CHFR-218ENST00000540963 ARHGEF25Q86VW2 580 aa38.57■■■■□ 3.76
CHFR-218ENST00000540963 AXIN2Q9Y2T1 843 aa38.57■■■■□ 3.76
CHFR-218ENST00000540963 YY1P25490 414 aa38.56■■■■□ 3.76
CHFR-218ENST00000540963 CASZ1Q86V15 1759 aa38.54■■■■□ 3.76
CHFR-218ENST00000540963 DCAF8L1A6NGE4 600 aa38.54■■■■□ 3.76
CHFR-218ENST00000540963 TTC21AQ8NDW8 1320 aa38.54■■■■□ 3.76
CHFR-218ENST00000540963 RGPD5Q99666 1765 aa38.54■■■■□ 3.76
CHFR-218ENST00000540963 CARD10Q9BWT7 1032 aa38.53■■■■□ 3.76
CHFR-218ENST00000540963 TTC21BQ7Z4L5 1316 aa38.53■■■■□ 3.76
CHFR-218ENST00000540963 MARCH10Q8NA82 808 aaPredicted RBP38.52■■■■□ 3.76
CHFR-218ENST00000540963 L3MBTL2Q969R5 705 aa38.52■■■■□ 3.76
CHFR-218ENST00000540963 ABCC6O95255 1503 aa38.51■■■■□ 3.76
CHFR-218ENST00000540963 ANO8Q9HCE9 1232 aaPredicted RBP38.49■■■■□ 3.75
CHFR-218ENST00000540963 CCDC7Q96M83 1385 aa38.45■■■■□ 3.75
CHFR-218ENST00000540963 NFAT5O94916 1531 aa38.45■■■■□ 3.75
CHFR-218ENST00000540963 PTF1AQ7RTS3 328 aa38.45■■■■□ 3.75
CHFR-218ENST00000540963 PROM2Q8N271 834 aa38.45■■■■□ 3.75
CHFR-218ENST00000540963 CSB-PGBD3P0DP91 1061 aa38.43■■■■□ 3.74
CHFR-218ENST00000540963 EXOC5O00471 708 aa38.42■■■■□ 3.74
CHFR-218ENST00000540963 ROCK2O75116 1388 aaKnown RBP38.42■■■■□ 3.74
CHFR-218ENST00000540963 MON2Q7Z3U7 1717 aa38.39■■■■□ 3.74
CHFR-218ENST00000540963 KTN1Q86UP2 1357 aaKnown RBP38.39■■■■□ 3.74
CHFR-218ENST00000540963 TNS2Q63HR2 1409 aa38.38■■■■□ 3.73
CHFR-218ENST00000540963 TXNRD1Q16881 649 aa38.37■■■■□ 3.73
CHFR-218ENST00000540963 USP54Q70EL1 1684 aa38.36■■■■□ 3.73
CHFR-218ENST00000540963 SOX12O15370 315 aa38.35■■■■□ 3.73
CHFR-218ENST00000540963 STK32BQ9NY57 414 aa38.35■■■■□ 3.73
CHFR-218ENST00000540963 SBNO2Q9Y2G9 1366 aa38.34■■■■□ 3.73
CHFR-218ENST00000540963 USP31Q70CQ4 1352 aa38.33■■■■□ 3.73
CHFR-218ENST00000540963 NHSQ6T4R5 1651 aa38.33■■■■□ 3.73
CHFR-218ENST00000540963 SLC15A2Q16348 729 aa38.32■■■■□ 3.72
CHFR-218ENST00000540963 PDGFDQ9GZP0 370 aaPredicted RBP38.32■■■■□ 3.72
CHFR-218ENST00000540963 PTGER2P43116 358 aa38.31■■■■□ 3.72
CHFR-218ENST00000540963 MYOM1P52179 1685 aa38.3■■■■□ 3.72
CHFR-218ENST00000540963 ZBTB7AO95365 584 aa38.3■■■■□ 3.72
CHFR-218ENST00000540963 SIN3AQ96ST3 1273 aa38.27■■■■□ 3.72
CHFR-218ENST00000540963 ERBB3P21860 1342 aa38.27■■■■□ 3.72
CHFR-218ENST00000540963 LTN1O94822 1766 aa38.24■■■■□ 3.71
CHFR-218ENST00000540963 MTFR1LQ9H019 292 aa38.24■■■■□ 3.71
CHFR-218ENST00000540963 ATF5Q9Y2D1 282 aaPredicted RBP38.22■■■■□ 3.71
CHFR-218ENST00000540963 IL2RBP14784 551 aa38.2■■■■□ 3.71
CHFR-218ENST00000540963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.2■■■■□ 3.71
CHFR-218ENST00000540963 CD163L1Q9NR16 1453 aa38.2■■■■□ 3.71
CHFR-218ENST00000540963 NLRP2Q9NX02 1062 aa38.19■■■■□ 3.7
CHFR-218ENST00000540963 NEUROD1Q13562 356 aa38.18■■■■□ 3.7
CHFR-218ENST00000540963 PAPPAQ13219 1627 aa38.18■■■■□ 3.7
CHFR-218ENST00000540963 SGIP1Q9BQI5 828 aa38.17■■■■□ 3.7
CHFR-218ENST00000540963 SYT17Q9BSW7 474 aa38.16■■■■□ 3.7
CHFR-218ENST00000540963 BTAF1O14981 1849 aa38.16■■■■□ 3.7
CHFR-218ENST00000540963 NME9Q86XW9 330 aa38.15■■■■□ 3.7
CHFR-218ENST00000540963 FHDC1Q9C0D6 1143 aaPredicted RBP38.15■■■■□ 3.7
CHFR-218ENST00000540963 EDC4Q6P2E9 1401 aaKnown RBP38.14■■■■□ 3.7
CHFR-218ENST00000540963 HDGFL2Q7Z4V5 671 aaPredicted RBP38.14■■■■□ 3.7
CHFR-218ENST00000540963 ACSBG1Q96GR2 724 aa38.13■■■■□ 3.69
CHFR-218ENST00000540963 KAT6BQ8WYB5 2073 aa38.12■■■■□ 3.69
CHFR-218ENST00000540963 CHD4Q14839 1912 aa38.11■■■■□ 3.69
CHFR-218ENST00000540963 ANKRD24Q8TF21 1146 aa38.11■■■■□ 3.69
CHFR-218ENST00000540963 PUS7Q96PZ0 661 aaKnown RBP38.1■■■■□ 3.69
CHFR-218ENST00000540963 MAP3K5Q99683 1374 aa38.09■■■■□ 3.69
CHFR-218ENST00000540963 FAM208AQ9UK61 1670 aaKnown RBP38.08■■■■□ 3.69
CHFR-218ENST00000540963 CARD11Q9BXL7 1154 aa38.08■■■■□ 3.69
CHFR-218ENST00000540963 TERF2IPQ9NYB0 399 aa38.08■■■■□ 3.69
CHFR-218ENST00000540963 TMC1Q8TDI8 760 aa38.07■■■■□ 3.68
CHFR-218ENST00000540963 ARXQ96QS3 562 aa38.05■■■■□ 3.68
CHFR-218ENST00000540963 SLC12A5Q9H2X9 1139 aa38.05■■■■□ 3.68
CHFR-218ENST00000540963 UTRNP46939 3433 aa38.05■■■■□ 3.68
CHFR-218ENST00000540963 QSER1Q2KHR3 1735 aa38.04■■■■□ 3.68
CHFR-218ENST00000540963 ZNF784Q8NCA9 323 aaPredicted RBP38.03■■■■□ 3.68
CHFR-218ENST00000540963 SLC27A3Q5K4L6 730 aa38.01■■■■□ 3.68
CHFR-218ENST00000540963 IP6K1Q92551 441 aa38.01■■■■□ 3.68
CHFR-218ENST00000540963 A0A1W2PP64 1363 aa38.01■■■■□ 3.68
CHFR-218ENST00000540963 SLC16A10Q8TF71 515 aa37.99■■■■□ 3.67
CHFR-218ENST00000540963 LRRC4BQ9NT99 713 aa37.99■■■■□ 3.67
CHFR-218ENST00000540963 ZNF827Q17R98 1081 aa37.98■■■■□ 3.67
CHFR-218ENST00000540963 COL24A1Q17RW2 1714 aa37.95■■■■□ 3.67
CHFR-218ENST00000540963 AKT1S1Q96B36 256 aa37.95■■■■□ 3.67
CHFR-218ENST00000540963 DDX54Q8TDD1 881 aaKnown RBP37.9■■■■□ 3.66
CHFR-218ENST00000540963 SLC24A1O60721 1099 aa37.89■■■■□ 3.66
CHFR-218ENST00000540963 ANKRD36BQ8N2N9 1353 aa37.88■■■■□ 3.65
CHFR-218ENST00000540963 LY75O60449 1722 aa37.87■■■■□ 3.65
CHFR-218ENST00000540963 POLD1P28340 1107 aa37.85■■■■□ 3.65
CHFR-218ENST00000540963 COG3Q96JB2 828 aa37.85■■■■□ 3.65
CHFR-218ENST00000540963 PNPLA7Q6ZV29 1317 aa37.84■■■■□ 3.65
CHFR-218ENST00000540963 DOT1LQ8TEK3 1739 aa37.84■■■■□ 3.65
CHFR-218ENST00000540963 TUBGCP6Q96RT7 1819 aa37.83■■■■□ 3.65
CHFR-218ENST00000540963 LTV1Q96GA3 475 aaPredicted RBP37.83■■■■□ 3.65
CHFR-218ENST00000540963 MAP3K19Q56UN5 1328 aa37.83■■■■□ 3.65
CHFR-218ENST00000540963 TONSLQ96HA7 1378 aa37.82■■■■□ 3.65
CHFR-218ENST00000540963 HOXC9P31274 260 aa37.82■■■■□ 3.64
CHFR-218ENST00000540963 SHANK3Q9BYB0 1731 aa37.81■■■■□ 3.64
CHFR-218ENST00000540963 PRIM1P49642 420 aaKnown RBP37.8■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms