RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 LAMC1P11047 1609 aa9.2□□□□□ -0.94
CLTCL1-206ENST00000540896 LTBP4Q8N2S1 1624 aa9.2□□□□□ -0.94
CLTCL1-206ENST00000540896 C11orf95C9JLR9 678 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-206ENST00000540896 TK2O00142 265 aa9.19□□□□□ -0.94
CLTCL1-206ENST00000540896 AXIN2Q9Y2T1 843 aa9.19□□□□□ -0.94
CLTCL1-206ENST00000540896 WASHC2AQ641Q2 1341 aa9.19□□□□□ -0.94
CLTCL1-206ENST00000540896 YTHDC2Q9H6S0 1430 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-206ENST00000540896 CPS1P31327 1500 aa9.18□□□□□ -0.94
CLTCL1-206ENST00000540896 LRPPRCP42704 1394 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-206ENST00000540896 KIF7Q2M1P5 1343 aa9.18□□□□□ -0.94
CLTCL1-206ENST00000540896 CDCA8Q53HL2 280 aa9.18□□□□□ -0.94
CLTCL1-206ENST00000540896 PPP1R15BQ5SWA1 713 aa9.18□□□□□ -0.94
CLTCL1-206ENST00000540896 OXER1Q8TDS5 423 aa9.18□□□□□ -0.94
CLTCL1-206ENST00000540896 RBM33Q96EV2 1170 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-206ENST00000540896 PRAM1Q96QH2 718 aa9.18□□□□□ -0.94
CLTCL1-206ENST00000540896 TESK2Q96S53 571 aa9.18□□□□□ -0.94
CLTCL1-206ENST00000540896 ADGRB1O14514 1584 aa9.17□□□□□ -0.94
CLTCL1-206ENST00000540896 NWD1Q149M9 1564 aa9.17□□□□□ -0.94
CLTCL1-206ENST00000540896 ASXL1Q8IXJ9 1541 aa9.17□□□□□ -0.94
CLTCL1-206ENST00000540896 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
CLTCL1-206ENST00000540896 ABCC11Q96J66 1382 aa9.17□□□□□ -0.94
CLTCL1-206ENST00000540896 CCDC7Q96M83 1385 aa9.17□□□□□ -0.94
CLTCL1-206ENST00000540896 GTPBP6O43824 516 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-206ENST00000540896 CERKQ8TCT0 537 aa9.17□□□□□ -0.94
CLTCL1-206ENST00000540896 XRN1Q8IZH2 1706 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-206ENST00000540896 NKTRP30414 1462 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-206ENST00000540896 TMEM94Q12767 1356 aa9.16□□□□□ -0.94
CLTCL1-206ENST00000540896 ROBO2Q9HCK4 1378 aa9.16□□□□□ -0.94
CLTCL1-206ENST00000540896 MINK1Q8N4C8 1332 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-206ENST00000540896 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
CLTCL1-206ENST00000540896 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
CLTCL1-206ENST00000540896 WAPLQ7Z5K2 1190 aa9.16□□□□□ -0.94
CLTCL1-206ENST00000540896 C14orf37Q86TY3 774 aa9.16□□□□□ -0.94
CLTCL1-206ENST00000540896 EVC2Q86UK5 1308 aa9.15□□□□□ -0.94
CLTCL1-206ENST00000540896 SIRT1Q96EB6 747 aa9.15□□□□□ -0.94
CLTCL1-206ENST00000540896 TECPR2O15040 1411 aa9.14□□□□□ -0.95
CLTCL1-206ENST00000540896 PTCH1Q13635 1447 aa9.14□□□□□ -0.95
CLTCL1-206ENST00000540896 DISP3Q9P2K9 1392 aa9.14□□□□□ -0.95
CLTCL1-206ENST00000540896 SRPK2P78362 688 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-206ENST00000540896 C19orf44Q9H6X5 657 aa9.13□□□□□ -0.95
CLTCL1-206ENST00000540896 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
CLTCL1-206ENST00000540896 FAM135BQ49AJ0 1406 aa9.13□□□□□ -0.95
CLTCL1-206ENST00000540896 NCOA3Q9Y6Q9 1424 aa9.13□□□□□ -0.95
CLTCL1-206ENST00000540896 PLEKHH1Q9ULM0 1364 aa9.12□□□□□ -0.95
CLTCL1-206ENST00000540896 XIRP1Q702N8 1843 aaKnown RBP9.12□□□□□ -0.95
CLTCL1-206ENST00000540896 DLC1Q96QB1 1528 aa9.12□□□□□ -0.95
CLTCL1-206ENST00000540896 KNDC1Q76NI1 1749 aa9.12□□□□□ -0.95
CLTCL1-206ENST00000540896 TMC1Q8TDI8 760 aa9.12□□□□□ -0.95
CLTCL1-206ENST00000540896 UPF1Q92900 1129 aaKnown RBP eCLIP9.12□□□□□ -0.95
CLTCL1-206ENST00000540896 MSH6P52701 1360 aa9.12□□□□□ -0.95
CLTCL1-206ENST00000540896 SBNO2Q9Y2G9 1366 aa9.12□□□□□ -0.95
CLTCL1-206ENST00000540896 IQSEC2Q5JU85 1478 aa9.11□□□□□ -0.95
CLTCL1-206ENST00000540896 ATF3P18847 181 aa9.11□□□□□ -0.95
CLTCL1-206ENST00000540896 FBXO41Q8TF61 875 aa9.11□□□□□ -0.95
CLTCL1-206ENST00000540896 DDX27Q96GQ7 796 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-206ENST00000540896 LARP6Q9BRS8 491 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-206ENST00000540896 CDK19Q9BWU1 502 aa9.11□□□□□ -0.95
CLTCL1-206ENST00000540896 UBAP1LF5GYI3 381 aa9.1□□□□□ -0.95
CLTCL1-206ENST00000540896 ANP32CO43423 234 aa9.1□□□□□ -0.95
CLTCL1-206ENST00000540896 CNGB1Q14028 1251 aaPredicted RBP9.1□□□□□ -0.95
CLTCL1-206ENST00000540896 ADGRL3Q9HAR2 1447 aa9.1□□□□□ -0.95
CLTCL1-206ENST00000540896 ARHGEF28Q8N1W1 1705 aaKnown RBP9.1□□□□□ -0.95
CLTCL1-206ENST00000540896 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-206ENST00000540896 WASLO00401 505 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-206ENST00000540896 TOM1O60784 492 aa9.09□□□□□ -0.95
CLTCL1-206ENST00000540896 PSEN2P49810 448 aa9.09□□□□□ -0.95
CLTCL1-206ENST00000540896 CADPS2Q86UW7 1296 aa9.09□□□□□ -0.95
CLTCL1-206ENST00000540896 ZNF454Q8N9F8 522 aa9.09□□□□□ -0.95
CLTCL1-206ENST00000540896 PUS7Q96PZ0 661 aaKnown RBP9.09□□□□□ -0.95
CLTCL1-206ENST00000540896 PANK3Q9H999 370 aa9.09□□□□□ -0.95
CLTCL1-206ENST00000540896 ANO8Q9HCE9 1232 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-206ENST00000540896 NALCNQ8IZF0 1738 aa9.08□□□□□ -0.96
CLTCL1-206ENST00000540896 HRO43593 1189 aa9.08□□□□□ -0.96
CLTCL1-206ENST00000540896 MAP3K9P80192 1104 aa9.08□□□□□ -0.96
CLTCL1-206ENST00000540896 DMRTA1Q5VZB9 504 aa9.08□□□□□ -0.96
CLTCL1-206ENST00000540896 KCNK17Q96T54 332 aa9.08□□□□□ -0.96
CLTCL1-206ENST00000540896 BCL2L12Q9HB09 334 aa9.08□□□□□ -0.96
CLTCL1-206ENST00000540896 SLAIN2Q9P270 581 aa9.08□□□□□ -0.96
CLTCL1-206ENST00000540896 QRICH2Q9H0J4 1663 aa9.07□□□□□ -0.96
CLTCL1-206ENST00000540896 NUTM2FA1L443 756 aa9.07□□□□□ -0.96
CLTCL1-206ENST00000540896 PIP4K2BP78356 416 aa9.07□□□□□ -0.96
CLTCL1-206ENST00000540896 MFSD10Q14728 455 aa9.07□□□□□ -0.96
CLTCL1-206ENST00000540896 SLC4A5Q9BY07 1137 aa9.07□□□□□ -0.96
CLTCL1-206ENST00000540896 KNSTRNQ9Y448 316 aa9.07□□□□□ -0.96
CLTCL1-206ENST00000540896 DCCP43146 1447 aa9.06□□□□□ -0.96
CLTCL1-206ENST00000540896 EVI5O60447 810 aa9.06□□□□□ -0.96
CLTCL1-206ENST00000540896 PTPREP23469 700 aa9.06□□□□□ -0.96
CLTCL1-206ENST00000540896 FOSBP53539 338 aa9.06□□□□□ -0.96
CLTCL1-206ENST00000540896 NUDT16Q96DE0 195 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-206ENST00000540896 SLC12A5Q9H2X9 1139 aa9.06□□□□□ -0.96
CLTCL1-206ENST00000540896 TERF2IPQ9NYB0 399 aa9.06□□□□□ -0.96
CLTCL1-206ENST00000540896 ATAD2Q6PL18 1390 aa9.06□□□□□ -0.96
CLTCL1-206ENST00000540896 CDC42BPGQ6DT37 1551 aa9.05□□□□□ -0.96
CLTCL1-206ENST00000540896 HDGFL2Q7Z4V5 671 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-206ENST00000540896 CABP1Q9NZU7 370 aa9.05□□□□□ -0.96
CLTCL1-206ENST00000540896 TULP4Q9NRJ4 1543 aa9.04□□□□□ -0.96
CLTCL1-206ENST00000540896 MST1RQ04912 1400 aa9.04□□□□□ -0.96
CLTCL1-206ENST00000540896 ADGRB2O60241 1585 aa9.03□□□□□ -0.96
CLTCL1-206ENST00000540896 FMN2Q9NZ56 1722 aa9.03□□□□□ -0.96
CLTCL1-206ENST00000540896 ESCO1Q5FWF5 840 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms