RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SEMA3EO15041 775 aa7.23□□□□□ -1.25
SNHG1-214ENST00000540865 ADAMTS2O95450 1211 aa7.23□□□□□ -1.25
SNHG1-214ENST00000540865 MAP3K9P80192 1104 aa7.23□□□□□ -1.25
SNHG1-214ENST00000540865 NBR1Q14596 966 aa7.23□□□□□ -1.25
SNHG1-214ENST00000540865 MST1RQ04912 1400 aa7.23□□□□□ -1.25
SNHG1-214ENST00000540865 SETBP1Q9Y6X0 1596 aa7.23□□□□□ -1.25
SNHG1-214ENST00000540865 CHD2O14647 1828 aaKnown RBP7.22□□□□□ -1.25
SNHG1-214ENST00000540865 HRO43593 1189 aa7.22□□□□□ -1.25
SNHG1-214ENST00000540865 KANK4Q5T7N3 995 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-214ENST00000540865 PTCD2Q8WV60 388 aaKnown RBP7.22□□□□□ -1.25
SNHG1-214ENST00000540865 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.21□□□□□ -1.25
SNHG1-214ENST00000540865 ATRNO75882 1429 aa7.21□□□□□ -1.25
SNHG1-214ENST00000540865 DAPK1P53355 1430 aa7.21□□□□□ -1.25
SNHG1-214ENST00000540865 PTPRUQ92729 1446 aa7.21□□□□□ -1.25
SNHG1-214ENST00000540865 DDX17Q92841 729 aaKnown RBP7.21□□□□□ -1.26
SNHG1-214ENST00000540865 ARIH1Q9Y4X5 557 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-214ENST00000540865 PTCH1Q13635 1447 aa7.2□□□□□ -1.26
SNHG1-214ENST00000540865 PSDA5PKW4 1024 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-214ENST00000540865 TK2O00142 265 aa7.2□□□□□ -1.26
SNHG1-214ENST00000540865 CHIC2Q9UKJ5 165 aa7.2□□□□□ -1.26
SNHG1-214ENST00000540865 TRPM2O94759 1503 aa7.19□□□□□ -1.26
SNHG1-214ENST00000540865 EVI5O60447 810 aa7.19□□□□□ -1.26
SNHG1-214ENST00000540865 SOS2Q07890 1332 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-214ENST00000540865 BLMP54132 1417 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-214ENST00000540865 VPS8Q8N3P4 1428 aa7.18□□□□□ -1.26
SNHG1-214ENST00000540865 MLLT3P42568 568 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-214ENST00000540865 PDIA6Q15084 440 aa7.18□□□□□ -1.26
SNHG1-214ENST00000540865 GJD4Q96KN9 370 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-214ENST00000540865 TMEM131LA2VDJ0 1609 aa7.18□□□□□ -1.26
SNHG1-214ENST00000540865 ADGRL3Q9HAR2 1447 aa7.18□□□□□ -1.26
SNHG1-214ENST00000540865 C1orf167Q5SNV9 1468 aa7.17□□□□□ -1.26
SNHG1-214ENST00000540865 NHSL1Q5SYE7 1610 aa7.17□□□□□ -1.26
SNHG1-214ENST00000540865 TBC1D12O60347 775 aa7.17□□□□□ -1.26
SNHG1-214ENST00000540865 BCL9LQ86UU0 1499 aa7.17□□□□□ -1.26
SNHG1-214ENST00000540865 SF3B2Q13435 895 aaKnown RBP7.16□□□□□ -1.26
SNHG1-214ENST00000540865 PPP4R3BQ5MIZ7 849 aa7.16□□□□□ -1.26
SNHG1-214ENST00000540865 DEFB132Q7Z7B7 95 aa7.16□□□□□ -1.26
SNHG1-214ENST00000540865 KCNK17Q96T54 332 aa7.16□□□□□ -1.26
SNHG1-214ENST00000540865 METP08581 1390 aa7.16□□□□□ -1.26
SNHG1-214ENST00000540865 ANKRD50Q9ULJ7 1429 aa7.16□□□□□ -1.26
SNHG1-214ENST00000540865 ADGRL2O95490 1459 aa7.16□□□□□ -1.26
SNHG1-214ENST00000540865 TESPA1A2RU30 521 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-214ENST00000540865 SPDYE16A6NNV3 312 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-214ENST00000540865 DDX12PQ92771 950 aa7.15□□□□□ -1.26
SNHG1-214ENST00000540865 ORAI2Q96SN7 254 aa7.15□□□□□ -1.26
SNHG1-214ENST00000540865 GRXCR2A6NFK2 248 aa7.14□□□□□ -1.27
SNHG1-214ENST00000540865 CROCC2H7BZ55 1655 aa7.14□□□□□ -1.27
SNHG1-214ENST00000540865 HRCP23327 699 aa7.14□□□□□ -1.27
SNHG1-214ENST00000540865 MYOM2P54296 1465 aa7.14□□□□□ -1.27
SNHG1-214ENST00000540865 PTPN5P54829 565 aa7.14□□□□□ -1.27
SNHG1-214ENST00000540865 UNC5CLQ8IV45 518 aa7.14□□□□□ -1.27
SNHG1-214ENST00000540865 STAC3Q96MF2 364 aa7.14□□□□□ -1.27
SNHG1-214ENST00000540865 PTPN23Q9H3S7 1636 aa7.14□□□□□ -1.27
SNHG1-214ENST00000540865 LRP5O75197 1615 aa7.13□□□□□ -1.27
SNHG1-214ENST00000540865 UNC13BO14795 1591 aa7.13□□□□□ -1.27
SNHG1-214ENST00000540865 XRN1Q8IZH2 1706 aaKnown RBP7.13□□□□□ -1.27
SNHG1-214ENST00000540865 GCC2Q8IWJ2 1684 aa7.12□□□□□ -1.27
SNHG1-214ENST00000540865 LAMC1P11047 1609 aa7.12□□□□□ -1.27
SNHG1-214ENST00000540865 NPHP3Q7Z494 1330 aa7.12□□□□□ -1.27
SNHG1-214ENST00000540865 SEPT12Q8IYM1 358 aa7.12□□□□□ -1.27
SNHG1-214ENST00000540865 IRX2Q9BZI1 471 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-214ENST00000540865 ANO8Q9HCE9 1232 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-214ENST00000540865 RALGAPBQ86X10 1494 aa7.11□□□□□ -1.27
SNHG1-214ENST00000540865 ONECUT3O60422 494 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-214ENST00000540865 BAG6P46379 1132 aa7.11□□□□□ -1.27
SNHG1-214ENST00000540865 ZNF326Q5BKZ1 582 aaKnown RBP7.11□□□□□ -1.27
SNHG1-214ENST00000540865 COL22A1Q8NFW1 1626 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-214ENST00000540865 PRIM1P49642 420 aaKnown RBP7.1□□□□□ -1.27
SNHG1-214ENST00000540865 VPS72Q15906 364 aa7.1□□□□□ -1.27
SNHG1-214ENST00000540865 RBM26Q5T8P6 1007 aaKnown RBP7.1□□□□□ -1.27
SNHG1-214ENST00000540865 KRT27Q7Z3Y8 459 aa7.1□□□□□ -1.27
SNHG1-214ENST00000540865 VPS9D1Q9Y2B5 631 aa7.1□□□□□ -1.27
SNHG1-214ENST00000540865 SLIT2O94813 1529 aa7.1□□□□□ -1.27
SNHG1-214ENST00000540865 MYO5BQ9ULV0 1848 aa7.1□□□□□ -1.27
SNHG1-214ENST00000540865 LRPPRCP42704 1394 aaKnown RBP7.09□□□□□ -1.27
SNHG1-214ENST00000540865 ROBO2Q9HCK4 1378 aa7.09□□□□□ -1.27
SNHG1-214ENST00000540865 NRXN3Q9Y4C0 1643 aa7.09□□□□□ -1.27
SNHG1-214ENST00000540865 YY1P25490 414 aa7.09□□□□□ -1.27
SNHG1-214ENST00000540865 FAM50AQ14320 339 aaKnown RBP7.09□□□□□ -1.27
SNHG1-214ENST00000540865 ESCO1Q5FWF5 840 aa7.09□□□□□ -1.27
SNHG1-214ENST00000540865 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.09□□□□□ -1.27
SNHG1-214ENST00000540865 HFM1A2PYH4 1435 aa7.09□□□□□ -1.28
SNHG1-214ENST00000540865 PRAG1Q86YV5 1406 aa7.09□□□□□ -1.28
SNHG1-214ENST00000540865 NUP155O75694 1391 aa7.08□□□□□ -1.28
SNHG1-214ENST00000540865 A0A0G2JS52 829 aa7.08□□□□□ -1.28
SNHG1-214ENST00000540865 FOXO3O43524 673 aa7.08□□□□□ -1.28
SNHG1-214ENST00000540865 OSBPP22059 807 aa7.08□□□□□ -1.28
SNHG1-214ENST00000540865 PCDHGA10Q9Y5H3 936 aa7.08□□□□□ -1.28
SNHG1-214ENST00000540865 PXDNQ92626 1479 aa7.08□□□□□ -1.28
SNHG1-214ENST00000540865 GLI3P10071 1580 aa7.08□□□□□ -1.28
SNHG1-214ENST00000540865 SPATA31A3Q5VYP0 1347 aa7.07□□□□□ -1.28
SNHG1-214ENST00000540865 RGS20O76081 388 aa7.07□□□□□ -1.28
SNHG1-214ENST00000540865 XPCQ01831 940 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-214ENST00000540865 R3HDM1Q15032 1099 aaKnown RBP7.07□□□□□ -1.28
SNHG1-214ENST00000540865 LMOD2Q6P5Q4 547 aa7.07□□□□□ -1.28
SNHG1-214ENST00000540865 THSD4Q6ZMP0 1018 aa7.07□□□□□ -1.28
SNHG1-214ENST00000540865 ZNF454Q8N9F8 522 aa7.07□□□□□ -1.28
SNHG1-214ENST00000540865 NALCNQ8IZF0 1738 aa7.07□□□□□ -1.28
SNHG1-214ENST00000540865 ROCK1Q13464 1354 aa7.07□□□□□ -1.28
SNHG1-214ENST00000540865 FOSBP53539 338 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms