RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 TBC1D9Q6ZT07 1266 aa17.66■□□□□ 0.42
INO80E-203ENST00000540562 ZBTB7CA1YPR0 619 aa17.65■□□□□ 0.42
INO80E-203ENST00000540562 F6X3S4 739 aa17.65■□□□□ 0.42
INO80E-203ENST00000540562 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
INO80E-203ENST00000540562 IL13P35225 146 aa17.64■□□□□ 0.41
INO80E-203ENST00000540562 NOL8Q76FK4 1167 aaKnown RBP17.64■□□□□ 0.41
INO80E-203ENST00000540562 LTV1Q96GA3 475 aaPredicted RBP17.64■□□□□ 0.41
INO80E-203ENST00000540562 CHMP5Q9NZZ3 219 aa17.64■□□□□ 0.41
INO80E-203ENST00000540562 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
INO80E-203ENST00000540562 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.41
INO80E-203ENST00000540562 METP08581 1390 aa17.64■□□□□ 0.41
INO80E-203ENST00000540562 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
INO80E-203ENST00000540562 CEBPAP49715 358 aaPredicted RBP17.63■□□□□ 0.41
INO80E-203ENST00000540562 GNAI1P63096 354 aa17.63■□□□□ 0.41
INO80E-203ENST00000540562 CHAMP1Q96JM3 812 aa17.63■□□□□ 0.41
INO80E-203ENST00000540562 DIP2CQ9Y2E4 1556 aa17.63■□□□□ 0.41
INO80E-203ENST00000540562 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
INO80E-203ENST00000540562 GOLGA6L3A6NEY3 463 aa17.63■□□□□ 0.41
INO80E-203ENST00000540562 XRCC6P12956 609 aaKnown RBP eCLIP17.63■□□□□ 0.41
INO80E-203ENST00000540562 RBM33Q96EV2 1170 aaKnown RBP17.63■□□□□ 0.41
INO80E-203ENST00000540562 CT47B1P0C2W7 299 aaPredicted RBP17.62■□□□□ 0.41
INO80E-203ENST00000540562 C14orf37Q86TY3 774 aa17.62■□□□□ 0.41
INO80E-203ENST00000540562 RRAGDQ9NQL2 400 aaPredicted RBP17.61■□□□□ 0.41
INO80E-203ENST00000540562 TSPOAP1O95153 1857 aa17.61■□□□□ 0.41
INO80E-203ENST00000540562 NCLP19338 710 aaKnown RBP17.61■□□□□ 0.41
INO80E-203ENST00000540562 AAMPQ13685 434 aa17.61■□□□□ 0.41
INO80E-203ENST00000540562 TNPO1Q92973 898 aaKnown RBP17.61■□□□□ 0.41
INO80E-203ENST00000540562 ALDH1L2Q3SY69 923 aa17.59■□□□□ 0.41
INO80E-203ENST00000540562 FOXD4L6Q3SYB3 417 aaPredicted RBP17.59■□□□□ 0.41
INO80E-203ENST00000540562 FOXD4L3Q6VB84 417 aaPredicted RBP17.59■□□□□ 0.41
INO80E-203ENST00000540562 MEIS3Q99687 375 aa17.59■□□□□ 0.41
INO80E-203ENST00000540562 GSPT1P15170 499 aaKnown RBP17.59■□□□□ 0.41
INO80E-203ENST00000540562 CCDC61Q9Y6R9 512 aa17.58■□□□□ 0.41
INO80E-203ENST00000540562 IL16Q14005 1332 aa17.58■□□□□ 0.41
INO80E-203ENST00000540562 NEURL4Q96JN8 1562 aa17.58■□□□□ 0.41
INO80E-203ENST00000540562 SSFA2P28290 1259 aa17.58■□□□□ 0.4
INO80E-203ENST00000540562 EIF4A2Q14240 407 aaKnown RBP17.58■□□□□ 0.4
INO80E-203ENST00000540562 PUS7Q96PZ0 661 aaKnown RBP17.58■□□□□ 0.4
INO80E-203ENST00000540562 GAS2L2Q8NHY3 880 aa17.58■□□□□ 0.4
INO80E-203ENST00000540562 PRR36Q9H6K5 1346 aa17.58■□□□□ 0.4
INO80E-203ENST00000540562 RIMS2Q9UQ26 1411 aa17.57■□□□□ 0.4
INO80E-203ENST00000540562 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
INO80E-203ENST00000540562 ADGRB2O60241 1585 aa17.57■□□□□ 0.4
INO80E-203ENST00000540562 ALKQ9UM73 1620 aa17.57■□□□□ 0.4
INO80E-203ENST00000540562 DTNBO60941 627 aa17.57■□□□□ 0.4
INO80E-203ENST00000540562 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
INO80E-203ENST00000540562 IFT57Q9NWB7 429 aa17.57■□□□□ 0.4
INO80E-203ENST00000540562 G2E3Q7L622 706 aa17.56■□□□□ 0.4
INO80E-203ENST00000540562 FAM135BQ49AJ0 1406 aa17.56■□□□□ 0.4
INO80E-203ENST00000540562 KIF2CQ99661 725 aa17.56■□□□□ 0.4
INO80E-203ENST00000540562 ARHGEF40Q8TER5 1519 aa17.55■□□□□ 0.4
INO80E-203ENST00000540562 VIRMAQ69YN4 1812 aaKnown RBP17.55■□□□□ 0.4
INO80E-203ENST00000540562 PNPLA6Q8IY17 1366 aa17.55■□□□□ 0.4
INO80E-203ENST00000540562 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
INO80E-203ENST00000540562 PKP1Q13835 747 aa17.55■□□□□ 0.4
INO80E-203ENST00000540562 BMP2KLQ5H9B9 411 aa17.55■□□□□ 0.4
INO80E-203ENST00000540562 ACEP12821 1306 aa17.53■□□□□ 0.4
INO80E-203ENST00000540562 MAP2P11137 1827 aaKnown RBP17.53■□□□□ 0.4
INO80E-203ENST00000540562 PLEKHM2Q8IWE5 1019 aa17.53■□□□□ 0.4
INO80E-203ENST00000540562 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
INO80E-203ENST00000540562 USHBP1Q8N6Y0 703 aa17.52■□□□□ 0.4
INO80E-203ENST00000540562 ZNF692Q9BU19 519 aaPredicted RBP17.52■□□□□ 0.4
INO80E-203ENST00000540562 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
INO80E-203ENST00000540562 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.39
INO80E-203ENST00000540562 L1TD1Q5T7N2 865 aaKnown RBP17.52■□□□□ 0.39
INO80E-203ENST00000540562 GAS2L3Q86XJ1 694 aa17.52■□□□□ 0.39
INO80E-203ENST00000540562 CPS1P31327 1500 aa17.52■□□□□ 0.39
INO80E-203ENST00000540562 API5Q9BZZ5 524 aaKnown RBP17.51■□□□□ 0.39
INO80E-203ENST00000540562 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
INO80E-203ENST00000540562 NEO1Q92859 1461 aa17.51■□□□□ 0.39
INO80E-203ENST00000540562 AK9Q5TCS8 1911 aa17.51■□□□□ 0.39
INO80E-203ENST00000540562 CDC45O75419 566 aa17.51■□□□□ 0.39
INO80E-203ENST00000540562 MSH6P52701 1360 aa17.51■□□□□ 0.39
INO80E-203ENST00000540562 USP32Q8NFA0 1604 aa17.5■□□□□ 0.39
INO80E-203ENST00000540562 RBM25P49756 843 aaKnown RBP17.5■□□□□ 0.39
INO80E-203ENST00000540562 NGDNQ8NEJ9 315 aaKnown RBP17.5■□□□□ 0.39
INO80E-203ENST00000540562 NAP1L5Q96NT1 182 aaPredicted RBP17.5■□□□□ 0.39
INO80E-203ENST00000540562 ABCC4O15439 1325 aa17.5■□□□□ 0.39
INO80E-203ENST00000540562 K7ELQ4 463 aaPredicted RBP17.49■□□□□ 0.39
INO80E-203ENST00000540562 ZNF853P0CG23 659 aa17.49■□□□□ 0.39
INO80E-203ENST00000540562 PREX1Q8TCU6 1659 aa17.49■□□□□ 0.39
INO80E-203ENST00000540562 MAP4K4O95819 1239 aaPredicted RBP17.49■□□□□ 0.39
INO80E-203ENST00000540562 AMPHP49418 695 aa17.49■□□□□ 0.39
INO80E-203ENST00000540562 ZGPATQ8N5A5 531 aaKnown RBP17.49■□□□□ 0.39
INO80E-203ENST00000540562 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
INO80E-203ENST00000540562 MCTP1Q6DN14 999 aa17.49■□□□□ 0.39
INO80E-203ENST00000540562 RTF1Q92541 710 aaKnown RBP17.49■□□□□ 0.39
INO80E-203ENST00000540562 ARHGAP31Q2M1Z3 1444 aa17.48■□□□□ 0.39
INO80E-203ENST00000540562 SDSP20132 328 aa17.48■□□□□ 0.39
INO80E-203ENST00000540562 ZFYVE9O95405 1425 aa17.48■□□□□ 0.39
INO80E-203ENST00000540562 LMOD3Q0VAK6 560 aa17.48■□□□□ 0.39
INO80E-203ENST00000540562 MTHFSDQ2M296 383 aaKnown RBP17.48■□□□□ 0.39
INO80E-203ENST00000540562 RILPL2Q969X0 211 aa17.47■□□□□ 0.39
INO80E-203ENST00000540562 A2ML1A8K2U0 1454 aa17.47■□□□□ 0.39
INO80E-203ENST00000540562 LTKP29376 864 aa17.47■□□□□ 0.39
INO80E-203ENST00000540562 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
INO80E-203ENST00000540562 GRPEL1Q9HAV7 217 aa17.47■□□□□ 0.39
INO80E-203ENST00000540562 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
INO80E-203ENST00000540562 ROBO2Q9HCK4 1378 aa17.47■□□□□ 0.39
INO80E-203ENST00000540562 DDX49Q9Y6V7 483 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms