RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 RIMS2Q9UQ26 1411 aa15.6■□□□□ 0.09
NEK6-213ENST00000540326 WASLO00401 505 aaPredicted RBP15.6■□□□□ 0.09
NEK6-213ENST00000540326 FAM69CQ0P6D2 419 aa15.6■□□□□ 0.09
NEK6-213ENST00000540326 CALD1Q05682 793 aaKnown RBP15.59■□□□□ 0.09
NEK6-213ENST00000540326 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
NEK6-213ENST00000540326 C8orf58Q8NAV2 365 aa15.59■□□□□ 0.09
NEK6-213ENST00000540326 IFT57Q9NWB7 429 aa15.59■□□□□ 0.09
NEK6-213ENST00000540326 DCTN1Q14203 1278 aa15.59■□□□□ 0.09
NEK6-213ENST00000540326 RBM25P49756 843 aaKnown RBP15.58■□□□□ 0.09
NEK6-213ENST00000540326 SIRT2Q8IXJ6 389 aa15.58■□□□□ 0.09
NEK6-213ENST00000540326 ARHGAP45Q92619 1136 aa15.58■□□□□ 0.09
NEK6-213ENST00000540326 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.58■□□□□ 0.09
NEK6-213ENST00000540326 ZNF853P0CG23 659 aa15.58■□□□□ 0.08
NEK6-213ENST00000540326 BMP2KLQ5H9B9 411 aa15.58■□□□□ 0.08
NEK6-213ENST00000540326 EDC4Q6P2E9 1401 aaKnown RBP15.58■□□□□ 0.08
NEK6-213ENST00000540326 DLC1Q96QB1 1528 aa15.57■□□□□ 0.08
NEK6-213ENST00000540326 CPSF1Q10570 1443 aaKnown RBP15.57■□□□□ 0.08
NEK6-213ENST00000540326 GCC1Q96CN9 775 aa15.57■□□□□ 0.08
NEK6-213ENST00000540326 NUDT16Q96DE0 195 aaKnown RBP15.57■□□□□ 0.08
NEK6-213ENST00000540326 COG3Q96JB2 828 aa15.57■□□□□ 0.08
NEK6-213ENST00000540326 METP08581 1390 aa15.57■□□□□ 0.08
NEK6-213ENST00000540326 PTCH1Q13635 1447 aa15.57■□□□□ 0.08
NEK6-213ENST00000540326 EIF5BO60841 1220 aaKnown RBP15.57■□□□□ 0.08
NEK6-213ENST00000540326 CFAP44Q96MT7 982 aa15.56■□□□□ 0.08
NEK6-213ENST00000540326 RIMBP3CA6NJZ7 1639 aa15.56■□□□□ 0.08
NEK6-213ENST00000540326 RIMBP3BA6NNM3 1639 aa15.56■□□□□ 0.08
NEK6-213ENST00000540326 RIMBP3Q9UFD9 1639 aa15.56■□□□□ 0.08
NEK6-213ENST00000540326 ABCC4O15439 1325 aa15.56■□□□□ 0.08
NEK6-213ENST00000540326 ZNF692Q9BU19 519 aaPredicted RBP15.55■□□□□ 0.08
NEK6-213ENST00000540326 CHMP4BQ9H444 224 aaKnown RBP15.55■□□□□ 0.08
NEK6-213ENST00000540326 PIK3R4Q99570 1358 aa15.55■□□□□ 0.08
NEK6-213ENST00000540326 SETD1AO15047 1707 aaKnown RBP15.55■□□□□ 0.08
NEK6-213ENST00000540326 L1TD1Q5T7N2 865 aaKnown RBP15.55■□□□□ 0.08
NEK6-213ENST00000540326 CDK12Q9NYV4 1490 aaPredicted RBP15.55■□□□□ 0.08
NEK6-213ENST00000540326 TSPOAP1O95153 1857 aa15.54■□□□□ 0.08
NEK6-213ENST00000540326 DLG5Q8TDM6 1919 aa15.54■□□□□ 0.08
NEK6-213ENST00000540326 TRAK2O60296 914 aa15.54■□□□□ 0.08
NEK6-213ENST00000540326 TBC1D9Q6ZT07 1266 aa15.54■□□□□ 0.08
NEK6-213ENST00000540326 CCDC61Q9Y6R9 512 aa15.54■□□□□ 0.08
NEK6-213ENST00000540326 CPS1P31327 1500 aa15.54■□□□□ 0.08
NEK6-213ENST00000540326 KIF2CQ99661 725 aa15.53■□□□□ 0.08
NEK6-213ENST00000540326 LMOD3Q0VAK6 560 aa15.53■□□□□ 0.08
NEK6-213ENST00000540326 AEBP1Q8IUX7 1158 aa15.53■□□□□ 0.08
NEK6-213ENST00000540326 AATKQ6ZMQ8 1374 aa15.52■□□□□ 0.08
NEK6-213ENST00000540326 GOLGA6L3A6NEY3 463 aa15.52■□□□□ 0.08
NEK6-213ENST00000540326 CD2BP2O95400 341 aaKnown RBP15.52■□□□□ 0.08
NEK6-213ENST00000540326 HSP90AB1P08238 724 aaKnown RBP15.52■□□□□ 0.08
NEK6-213ENST00000540326 SNX21Q969T3 373 aa15.52■□□□□ 0.08
NEK6-213ENST00000540326 XRCC6P12956 609 aaKnown RBP eCLIP15.52■□□□□ 0.07
NEK6-213ENST00000540326 KRT24Q2M2I5 525 aa15.52■□□□□ 0.07
NEK6-213ENST00000540326 FAM43AQ8N2R8 423 aa15.52■□□□□ 0.07
NEK6-213ENST00000540326 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.07
NEK6-213ENST00000540326 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
NEK6-213ENST00000540326 API5Q9BZZ5 524 aaKnown RBP15.51■□□□□ 0.07
NEK6-213ENST00000540326 SPATA31D1Q6ZQQ2 1576 aa15.51■□□□□ 0.07
NEK6-213ENST00000540326 NCOA3Q9Y6Q9 1424 aa15.51■□□□□ 0.07
NEK6-213ENST00000540326 DDIT3P35638 169 aa15.51■□□□□ 0.07
NEK6-213ENST00000540326 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
NEK6-213ENST00000540326 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
NEK6-213ENST00000540326 NUTM2FA1L443 756 aa15.5■□□□□ 0.07
NEK6-213ENST00000540326 SULT6B1Q6IMI4 303 aa15.5■□□□□ 0.07
NEK6-213ENST00000540326 HSP90AA1P07900 732 aaKnown RBP15.49■□□□□ 0.07
NEK6-213ENST00000540326 TNPO1Q92973 898 aaKnown RBP15.49■□□□□ 0.07
NEK6-213ENST00000540326 PANK2Q9BZ23 570 aa15.49■□□□□ 0.07
NEK6-213ENST00000540326 PRR36Q9H6K5 1346 aa15.49■□□□□ 0.07
NEK6-213ENST00000540326 FSD2A1L4K1 749 aa15.49■□□□□ 0.07
NEK6-213ENST00000540326 GSPT1P15170 499 aaKnown RBP15.48■□□□□ 0.07
NEK6-213ENST00000540326 MCM10Q7L590 875 aa15.48■□□□□ 0.07
NEK6-213ENST00000540326 EIF4A2Q14240 407 aaKnown RBP15.48■□□□□ 0.07
NEK6-213ENST00000540326 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.48■□□□□ 0.07
NEK6-213ENST00000540326 AGLP35573 1532 aa15.47■□□□□ 0.07
NEK6-213ENST00000540326 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
NEK6-213ENST00000540326 SOX12O15370 315 aa15.47■□□□□ 0.07
NEK6-213ENST00000540326 C16orf71Q8IYS4 520 aaPredicted RBP15.47■□□□□ 0.07
NEK6-213ENST00000540326 CDC45O75419 566 aa15.46■□□□□ 0.07
NEK6-213ENST00000540326 PLEKHM2Q8IWE5 1019 aa15.46■□□□□ 0.07
NEK6-213ENST00000540326 ESF1Q9H501 851 aaKnown RBP15.46■□□□□ 0.07
NEK6-213ENST00000540326 KNDC1Q76NI1 1749 aa15.46■□□□□ 0.07
NEK6-213ENST00000540326 MON2Q7Z3U7 1717 aa15.46■□□□□ 0.07
NEK6-213ENST00000540326 APBB1O00213 710 aa15.45■□□□□ 0.06
NEK6-213ENST00000540326 DCTPP1Q9H773 170 aa15.45■□□□□ 0.06
NEK6-213ENST00000540326 RRAGDQ9NQL2 400 aaPredicted RBP15.45■□□□□ 0.06
NEK6-213ENST00000540326 DIP2BQ9P265 1576 aa15.45■□□□□ 0.06
NEK6-213ENST00000540326 K7ELQ4 463 aaPredicted RBP15.45■□□□□ 0.06
NEK6-213ENST00000540326 HSP90AB2PQ58FF8 381 aa15.45■□□□□ 0.06
NEK6-213ENST00000540326 C3P01024 1663 aa15.45■□□□□ 0.06
NEK6-213ENST00000540326 REREQ9P2R6 1566 aa15.44■□□□□ 0.06
NEK6-213ENST00000540326 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
NEK6-213ENST00000540326 OTUD7AQ8TE49 926 aaPredicted RBP15.44■□□□□ 0.06
NEK6-213ENST00000540326 RAB3GAP1Q15042 981 aa15.44■□□□□ 0.06
NEK6-213ENST00000540326 MIS18AQ9NYP9 233 aa15.43■□□□□ 0.06
NEK6-213ENST00000540326 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
NEK6-213ENST00000540326 CHL1O00533 1208 aa15.43■□□□□ 0.06
NEK6-213ENST00000540326 GAS2L2Q8NHY3 880 aa15.43■□□□□ 0.06
NEK6-213ENST00000540326 ACEP12821 1306 aa15.43■□□□□ 0.06
NEK6-213ENST00000540326 TTC21BQ7Z4L5 1316 aa15.43■□□□□ 0.06
NEK6-213ENST00000540326 ROBO2Q9HCK4 1378 aa15.43■□□□□ 0.06
NEK6-213ENST00000540326 ITSN1Q15811 1721 aa15.43■□□□□ 0.06
NEK6-213ENST00000540326 GBP4Q96PP9 640 aa15.42■□□□□ 0.06
NEK6-213ENST00000540326 AKAP12Q02952 1782 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms