RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TRIM32Q13049 653 aa6.86□□□□□ -1.31
C2CD3-214ENST00000540057 TTLL12Q14166 644 aaPredicted RBP6.86□□□□□ -1.31
C2CD3-214ENST00000540057 GIGYF2Q6Y7W6 1299 aaKnown RBP6.86□□□□□ -1.31
C2CD3-214ENST00000540057 NUTM1Q86Y26 1132 aa6.86□□□□□ -1.31
C2CD3-214ENST00000540057 SPIRE2Q8WWL2 714 aa6.86□□□□□ -1.31
C2CD3-214ENST00000540057 MAGI2Q86UL8 1455 aa6.85□□□□□ -1.31
C2CD3-214ENST00000540057 UBAP1LF5GYI3 381 aa6.85□□□□□ -1.31
C2CD3-214ENST00000540057 ST8SIA5O15466 376 aa6.85□□□□□ -1.31
C2CD3-214ENST00000540057 JUNDP17535 347 aa6.85□□□□□ -1.31
C2CD3-214ENST00000540057 ZNF787Q6DD87 383 aa6.85□□□□□ -1.31
C2CD3-214ENST00000540057 RETREG3Q86VR2 466 aa6.85□□□□□ -1.31
C2CD3-214ENST00000540057 HECW1Q76N89 1606 aa6.85□□□□□ -1.31
C2CD3-214ENST00000540057 POTECB2RU33 542 aa6.84□□□□□ -1.31
C2CD3-214ENST00000540057 WNT7AO00755 349 aa6.84□□□□□ -1.31
C2CD3-214ENST00000540057 FDX1P10109 184 aa6.84□□□□□ -1.31
C2CD3-214ENST00000540057 PARP9Q8IXQ6 854 aa6.84□□□□□ -1.31
C2CD3-214ENST00000540057 AAASQ9NRG9 546 aa6.84□□□□□ -1.31
C2CD3-214ENST00000540057 CFAP74Q9C0B2 1584 aa6.83□□□□□ -1.32
C2CD3-214ENST00000540057 MOXD2PA6NHM9 499 aa6.83□□□□□ -1.32
C2CD3-214ENST00000540057 TRIM66O15016 1216 aa6.83□□□□□ -1.32
C2CD3-214ENST00000540057 ZBTB24O43167 697 aaPredicted RBP6.83□□□□□ -1.32
C2CD3-214ENST00000540057 AVPP01185 164 aa6.83□□□□□ -1.32
C2CD3-214ENST00000540057 NDUFV2P19404 249 aa6.83□□□□□ -1.32
C2CD3-214ENST00000540057 SKOR1P84550 965 aa6.83□□□□□ -1.32
C2CD3-214ENST00000540057 CRIPAKQ8N1N5 446 aa6.83□□□□□ -1.32
C2CD3-214ENST00000540057 NCOA1Q15788 1441 aa6.83□□□□□ -1.32
C2CD3-214ENST00000540057 ZNF335Q9H4Z2 1342 aaPredicted RBP6.82□□□□□ -1.32
C2CD3-214ENST00000540057 ATP10AO60312 1499 aa6.82□□□□□ -1.32
C2CD3-214ENST00000540057 HSPA1LP34931 641 aa6.82□□□□□ -1.32
C2CD3-214ENST00000540057 CYP4X1Q8N118 509 aa6.82□□□□□ -1.32
C2CD3-214ENST00000540057 RAPGEF6Q8TEU7 1601 aa6.82□□□□□ -1.32
C2CD3-214ENST00000540057 C9orf84Q5VXU9 1444 aa6.82□□□□□ -1.32
C2CD3-214ENST00000540057 C3P01024 1663 aa6.81□□□□□ -1.32
C2CD3-214ENST00000540057 MS4A1P11836 297 aa6.81□□□□□ -1.32
C2CD3-214ENST00000540057 FAM9AQ8IZU1 332 aaPredicted RBP6.81□□□□□ -1.32
C2CD3-214ENST00000540057 CCDC24Q8N4L8 307 aa6.81□□□□□ -1.32
C2CD3-214ENST00000540057 BEGAINQ9BUH8 593 aa6.81□□□□□ -1.32
C2CD3-214ENST00000540057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.81□□□□□ -1.32
C2CD3-214ENST00000540057 SMPD1P17405 629 aa6.8□□□□□ -1.32
C2CD3-214ENST00000540057 PTCRAQ6ISU1 281 aaPredicted RBP6.8□□□□□ -1.32
C2CD3-214ENST00000540057 MRGPRX2Q96LB1 330 aa6.8□□□□□ -1.32
C2CD3-214ENST00000540057 SCAPERQ9BY12 1400 aa6.8□□□□□ -1.32
C2CD3-214ENST00000540057 DACH1Q9UI36 760 aa6.8□□□□□ -1.32
C2CD3-214ENST00000540057 NUP153P49790 1475 aaKnown RBP6.79□□□□□ -1.32
C2CD3-214ENST00000540057 TRAPPC8Q9Y2L5 1435 aa6.79□□□□□ -1.32
C2CD3-214ENST00000540057 PLEKHD1A6NEE1 506 aa6.79□□□□□ -1.32
C2CD3-214ENST00000540057 C6orf229H3BNL8 230 aa6.79□□□□□ -1.32
C2CD3-214ENST00000540057 SMCPP49901 116 aaPredicted RBP6.79□□□□□ -1.32
C2CD3-214ENST00000540057 WNT7BP56706 349 aa6.79□□□□□ -1.32
C2CD3-214ENST00000540057 AK7Q96M32 723 aa6.79□□□□□ -1.32
C2CD3-214ENST00000540057 NUDT12Q9BQG2 462 aa6.79□□□□□ -1.32
C2CD3-214ENST00000540057 TBC1D2Q9BYX2 928 aa6.79□□□□□ -1.32
C2CD3-214ENST00000540057 CAMSAP1Q5T5Y3 1602 aa6.79□□□□□ -1.32
C2CD3-214ENST00000540057 TTC24A2A3L6 582 aaPredicted RBP6.78□□□□□ -1.32
C2CD3-214ENST00000540057 J3QL48 77 aa6.78□□□□□ -1.32
C2CD3-214ENST00000540057 RSBN1LQ6PCB5 846 aaPredicted RBP6.78□□□□□ -1.32
C2CD3-214ENST00000540057 SNIP1Q8TAD8 396 aaKnown RBP6.78□□□□□ -1.32
C2CD3-214ENST00000540057 ZNF775Q96BV0 537 aaPredicted RBP6.78□□□□□ -1.32
C2CD3-214ENST00000540057 CCNYL3P0C7X3 344 aa6.77□□□□□ -1.33
C2CD3-214ENST00000540057 GJA5P36382 358 aa6.77□□□□□ -1.33
C2CD3-214ENST00000540057 PIP4K2BP78356 416 aa6.77□□□□□ -1.33
C2CD3-214ENST00000540057 PTPRNQ16849 979 aa6.77□□□□□ -1.33
C2CD3-214ENST00000540057 RC3H1Q5TC82 1133 aaKnown RBP6.77□□□□□ -1.33
C2CD3-214ENST00000540057 SPTLC1O15269 473 aa6.76□□□□□ -1.33
C2CD3-214ENST00000540057 MTMR2Q13614 643 aa6.76□□□□□ -1.33
C2CD3-214ENST00000540057 CTC1Q2NKJ3 1217 aa6.76□□□□□ -1.33
C2CD3-214ENST00000540057 PRR7Q8TB68 274 aa6.76□□□□□ -1.33
C2CD3-214ENST00000540057 PCDHB15Q9Y5E8 787 aa6.76□□□□□ -1.33
C2CD3-214ENST00000540057 SAMD9Q5K651 1589 aa6.76□□□□□ -1.33
C2CD3-214ENST00000540057 PLCH2O75038 1416 aa6.76□□□□□ -1.33
C2CD3-214ENST00000540057 PRXQ9BXM0 1461 aa6.75□□□□□ -1.33
C2CD3-214ENST00000540057 AXIN1O15169 862 aa6.75□□□□□ -1.33
C2CD3-214ENST00000540057 TOM1O60784 492 aa6.75□□□□□ -1.33
C2CD3-214ENST00000540057 PDE4DQ08499 809 aa6.75□□□□□ -1.33
C2CD3-214ENST00000540057 DESI1Q6ICB0 168 aa6.75□□□□□ -1.33
C2CD3-214ENST00000540057 REREQ9P2R6 1566 aa6.74□□□□□ -1.33
C2CD3-214ENST00000540057 DIP2CQ9Y2E4 1556 aa6.74□□□□□ -1.33
C2CD3-214ENST00000540057 CFAP99D6REC4 459 aa6.74□□□□□ -1.33
C2CD3-214ENST00000540057 SIAH2O43255 324 aa6.74□□□□□ -1.33
C2CD3-214ENST00000540057 SLC24A3Q9HC58 644 aa6.74□□□□□ -1.33
C2CD3-214ENST00000540057 EVA1BQ9NVM1 165 aa6.74□□□□□ -1.33
C2CD3-214ENST00000540057 RGS17Q9UGC6 210 aaPredicted RBP6.74□□□□□ -1.33
C2CD3-214ENST00000540057 KDM5CP41229 1560 aa6.74□□□□□ -1.33
C2CD3-214ENST00000540057 PLA2R1Q13018 1463 aa6.73□□□□□ -1.33
C2CD3-214ENST00000540057 TCOF1Q13428 1488 aaKnown RBP6.73□□□□□ -1.33
C2CD3-214ENST00000540057 AGLP35573 1532 aa6.73□□□□□ -1.33
C2CD3-214ENST00000540057 SPDYE5A6NIY4 337 aa6.73□□□□□ -1.33
C2CD3-214ENST00000540057 SH3BP2P78314 561 aa6.73□□□□□ -1.33
C2CD3-214ENST00000540057 AFAP1Q8N556 730 aa6.73□□□□□ -1.33
C2CD3-214ENST00000540057 HPS1Q92902 700 aa6.73□□□□□ -1.33
C2CD3-214ENST00000540057 UNC93B1Q9H1C4 597 aa6.73□□□□□ -1.33
C2CD3-214ENST00000540057 ESF1Q9H501 851 aaKnown RBP6.73□□□□□ -1.33
C2CD3-214ENST00000540057 GMPR2Q9P2T1 348 aaKnown RBP6.73□□□□□ -1.33
C2CD3-214ENST00000540057 NPATQ14207 1427 aa6.73□□□□□ -1.33
C2CD3-214ENST00000540057 ZNF518AQ6AHZ1 1483 aa6.73□□□□□ -1.33
C2CD3-214ENST00000540057 ABCA6Q8N139 1617 aa6.72□□□□□ -1.33
C2CD3-214ENST00000540057 ALKQ9UM73 1620 aa6.72□□□□□ -1.33
C2CD3-214ENST00000540057 HRCP23327 699 aa6.72□□□□□ -1.33
C2CD3-214ENST00000540057 KCNH2Q12809 1159 aa6.72□□□□□ -1.33
C2CD3-214ENST00000540057 DIXDC1Q155Q3 683 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms