RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 MPRIPQ6WCQ1 1025 aa10.42□□□□□ -0.74
GNE-205ENST00000539815 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
GNE-205ENST00000539815 ANKRD24Q8TF21 1146 aa10.41□□□□□ -0.74
GNE-205ENST00000539815 SLIT2O94813 1529 aa10.4□□□□□ -0.74
GNE-205ENST00000539815 CCDC7Q96M83 1385 aa10.4□□□□□ -0.74
GNE-205ENST00000539815 WDR17Q8IZU2 1322 aa10.4□□□□□ -0.74
GNE-205ENST00000539815 ZCRB1Q8TBF4 217 aaKnown RBP10.4□□□□□ -0.74
GNE-205ENST00000539815 RBM42Q9BTD8 480 aaKnown RBP10.4□□□□□ -0.74
GNE-205ENST00000539815 TECPR2O15040 1411 aa10.4□□□□□ -0.75
GNE-205ENST00000539815 PRIM1P49642 420 aaKnown RBP10.39□□□□□ -0.75
GNE-205ENST00000539815 ZNF330Q9Y3S2 320 aaPredicted RBP10.39□□□□□ -0.75
GNE-205ENST00000539815 KTN1Q86UP2 1357 aaKnown RBP10.39□□□□□ -0.75
GNE-205ENST00000539815 PLEKHG3A1L390 1219 aa10.39□□□□□ -0.75
GNE-205ENST00000539815 PAXIP1Q6ZW49 1069 aaPredicted RBP10.39□□□□□ -0.75
GNE-205ENST00000539815 TMX4Q9H1E5 349 aaPredicted RBP10.39□□□□□ -0.75
GNE-205ENST00000539815 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
GNE-205ENST00000539815 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
GNE-205ENST00000539815 CNGB1Q14028 1251 aaPredicted RBP10.39□□□□□ -0.75
GNE-205ENST00000539815 SSH2Q76I76 1423 aa10.39□□□□□ -0.75
GNE-205ENST00000539815 SLC27A3Q5K4L6 730 aa10.38□□□□□ -0.75
GNE-205ENST00000539815 FCHSD2O94868 740 aa10.38□□□□□ -0.75
GNE-205ENST00000539815 TTC21AQ8NDW8 1320 aa10.38□□□□□ -0.75
GNE-205ENST00000539815 ADGRB2O60241 1585 aa10.38□□□□□ -0.75
GNE-205ENST00000539815 NEFMP07197 916 aa10.38□□□□□ -0.75
GNE-205ENST00000539815 BEGAINQ9BUH8 593 aa10.38□□□□□ -0.75
GNE-205ENST00000539815 SMG6Q86US8 1419 aaKnown RBP10.37□□□□□ -0.75
GNE-205ENST00000539815 CRB1P82279 1406 aa10.36□□□□□ -0.75
GNE-205ENST00000539815 PARP3Q9Y6F1 533 aa10.36□□□□□ -0.75
GNE-205ENST00000539815 TTC21BQ7Z4L5 1316 aa10.36□□□□□ -0.75
GNE-205ENST00000539815 AIDAQ96BJ3 306 aa10.36□□□□□ -0.75
GNE-205ENST00000539815 MARCH10Q8NA82 808 aaPredicted RBP10.36□□□□□ -0.75
GNE-205ENST00000539815 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
GNE-205ENST00000539815 PRR36Q9H6K5 1346 aa10.36□□□□□ -0.75
GNE-205ENST00000539815 PPIP5K1Q6PFW1 1433 aa10.36□□□□□ -0.75
GNE-205ENST00000539815 RFC4P35249 363 aa10.35□□□□□ -0.75
GNE-205ENST00000539815 WASHC2AQ641Q2 1341 aa10.35□□□□□ -0.75
GNE-205ENST00000539815 KIF1BO60333 1816 aa10.35□□□□□ -0.75
GNE-205ENST00000539815 CCDC87Q9NVE4 849 aa10.35□□□□□ -0.75
GNE-205ENST00000539815 TMOD3Q9NYL9 352 aa10.35□□□□□ -0.75
GNE-205ENST00000539815 UNC13BO14795 1591 aa10.35□□□□□ -0.75
GNE-205ENST00000539815 GTF2E1P29083 439 aaPredicted RBP10.34□□□□□ -0.75
GNE-205ENST00000539815 TNS4Q8IZW8 715 aa10.34□□□□□ -0.75
GNE-205ENST00000539815 C1orf141Q5JVX7 400 aa10.34□□□□□ -0.75
GNE-205ENST00000539815 RAB3GAP2Q9H2M9 1393 aa10.33□□□□□ -0.76
GNE-205ENST00000539815 PXDNQ92626 1479 aa10.33□□□□□ -0.76
GNE-205ENST00000539815 NBPF1Q3BBV0 1214 aa10.33□□□□□ -0.76
GNE-205ENST00000539815 PIK3C2GO75747 1445 aa10.33□□□□□ -0.76
GNE-205ENST00000539815 KDM2BQ8NHM5 1336 aa10.33□□□□□ -0.76
GNE-205ENST00000539815 IFFO2Q5TF58 517 aa10.32□□□□□ -0.76
GNE-205ENST00000539815 RTCBQ9Y3I0 505 aaKnown RBP10.32□□□□□ -0.76
GNE-205ENST00000539815 TMF1P82094 1093 aa10.32□□□□□ -0.76
GNE-205ENST00000539815 CDC42BPGQ6DT37 1551 aa10.32□□□□□ -0.76
GNE-205ENST00000539815 IQGAP3Q86VI3 1631 aa10.32□□□□□ -0.76
GNE-205ENST00000539815 NRXN1Q9ULB1 1477 aa10.32□□□□□ -0.76
GNE-205ENST00000539815 TNNT2P45379 298 aaPredicted RBP10.32□□□□□ -0.76
GNE-205ENST00000539815 KCNQ4P56696 695 aa10.32□□□□□ -0.76
GNE-205ENST00000539815 DPY19L2Q6NUT2 758 aa10.32□□□□□ -0.76
GNE-205ENST00000539815 POLR3AO14802 1390 aaPredicted RBP10.32□□□□□ -0.76
GNE-205ENST00000539815 GNPATO15228 680 aa10.31□□□□□ -0.76
GNE-205ENST00000539815 HSPA6P17066 643 aa10.31□□□□□ -0.76
GNE-205ENST00000539815 ARHGEF25Q86VW2 580 aa10.31□□□□□ -0.76
GNE-205ENST00000539815 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
GNE-205ENST00000539815 E9PCH4 1651 aa10.31□□□□□ -0.76
GNE-205ENST00000539815 AATKQ6ZMQ8 1374 aa10.31□□□□□ -0.76
GNE-205ENST00000539815 ZPR1O75312 459 aa10.31□□□□□ -0.76
GNE-205ENST00000539815 APLP1P51693 650 aa10.31□□□□□ -0.76
GNE-205ENST00000539815 USP6P35125 1406 aa10.31□□□□□ -0.76
GNE-205ENST00000539815 NME9Q86XW9 330 aa10.3□□□□□ -0.76
GNE-205ENST00000539815 NEXMIFQ5QGS0 1516 aa10.3□□□□□ -0.76
GNE-205ENST00000539815 TRAPPC3LQ5T215 181 aa10.3□□□□□ -0.76
GNE-205ENST00000539815 CROCC2H7BZ55 1655 aa10.3□□□□□ -0.76
GNE-205ENST00000539815 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
GNE-205ENST00000539815 GRM1Q13255 1194 aa10.29□□□□□ -0.76
GNE-205ENST00000539815 NLGN1Q8N2Q7 840 aa10.29□□□□□ -0.76
GNE-205ENST00000539815 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
GNE-205ENST00000539815 HSP90AB1P08238 724 aaKnown RBP10.29□□□□□ -0.76
GNE-205ENST00000539815 L3MBTL2Q969R5 705 aa10.29□□□□□ -0.76
GNE-205ENST00000539815 ATP7BP35670 1465 aa10.28□□□□□ -0.76
GNE-205ENST00000539815 CD2APQ9Y5K6 639 aa10.28□□□□□ -0.76
GNE-205ENST00000539815 MYO5BQ9ULV0 1848 aa10.28□□□□□ -0.76
GNE-205ENST00000539815 CABP4P57796 275 aa10.27□□□□□ -0.76
GNE-205ENST00000539815 SLC12A5Q9H2X9 1139 aa10.27□□□□□ -0.76
GNE-205ENST00000539815 SPHKAPQ2M3C7 1700 aa10.27□□□□□ -0.77
GNE-205ENST00000539815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.27□□□□□ -0.77
GNE-205ENST00000539815 PDGFDQ9GZP0 370 aaPredicted RBP10.27□□□□□ -0.77
GNE-205ENST00000539815 XIRP1Q702N8 1843 aaKnown RBP10.27□□□□□ -0.77
GNE-205ENST00000539815 USHBP1Q8N6Y0 703 aa10.27□□□□□ -0.77
GNE-205ENST00000539815 CLTCL1P53675 1640 aa10.27□□□□□ -0.77
GNE-205ENST00000539815 NHSL1Q5SYE7 1610 aa10.27□□□□□ -0.77
GNE-205ENST00000539815 USP32Q8NFA0 1604 aa10.26□□□□□ -0.77
GNE-205ENST00000539815 RNF181Q9P0P0 153 aa10.26□□□□□ -0.77
GNE-205ENST00000539815 GGNBP2Q9H3C7 697 aa10.26□□□□□ -0.77
GNE-205ENST00000539815 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
GNE-205ENST00000539815 CPDO75976 1380 aa10.26□□□□□ -0.77
GNE-205ENST00000539815 IP6K1Q92551 441 aa10.25□□□□□ -0.77
GNE-205ENST00000539815 KIF1AQ12756 1690 aa10.25□□□□□ -0.77
GNE-205ENST00000539815 IGSF1Q8N6C5 1336 aa10.25□□□□□ -0.77
GNE-205ENST00000539815 TOMM70O94826 608 aa10.25□□□□□ -0.77
GNE-205ENST00000539815 MMP10P09238 476 aa10.25□□□□□ -0.77
GNE-205ENST00000539815 PLEKHO1Q53GL0 409 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms