RNA–Protein interactions for RNA: ENST00000539067.5

CRX-202, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRX, Length 2,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-202ENST00000539067 MED1Q15648 1581 aaPredicted RBP16.07■□□□□ 0.16
CRX-202ENST00000539067 ZBTB7CA1YPR0 619 aa16.06■□□□□ 0.16
CRX-202ENST00000539067 LRP6O75581 1613 aa16.06■□□□□ 0.16
CRX-202ENST00000539067 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
CRX-202ENST00000539067 ZC3H6P61129 1189 aaKnown RBP16.06■□□□□ 0.16
CRX-202ENST00000539067 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.16
CRX-202ENST00000539067 CDCA7LQ96GN5 454 aa16.06■□□□□ 0.16
CRX-202ENST00000539067 OVOS2A0A0J9YW53 1432 aa16.06■□□□□ 0.16
CRX-202ENST00000539067 OVOS2Q6IE36 1432 aa16.06■□□□□ 0.16
CRX-202ENST00000539067 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
CRX-202ENST00000539067 CDK12Q9NYV4 1490 aaPredicted RBP16.05■□□□□ 0.16
CRX-202ENST00000539067 DIAPH1O60610 1272 aaKnown RBP16.05■□□□□ 0.16
CRX-202ENST00000539067 MARF1Q9Y4F3 1742 aaKnown RBP16.04■□□□□ 0.16
CRX-202ENST00000539067 GCP02774 474 aa16.03■□□□□ 0.16
CRX-202ENST00000539067 GOLGA2Q08379 1002 aa16.03■□□□□ 0.16
CRX-202ENST00000539067 COL22A1Q8NFW1 1626 aaPredicted RBP16.03■□□□□ 0.16
CRX-202ENST00000539067 U2SURPO15042 1029 aaKnown RBP16.03■□□□□ 0.16
CRX-202ENST00000539067 ERICH6BQ5W0A0 696 aa16.03■□□□□ 0.16
CRX-202ENST00000539067 RNF123Q5XPI4 1314 aa16.03■□□□□ 0.16
CRX-202ENST00000539067 CHRNA2Q15822 529 aa16.02■□□□□ 0.16
CRX-202ENST00000539067 SPATA31A6Q5VVP1 1343 aa16.02■□□□□ 0.16
CRX-202ENST00000539067 ABCA3Q99758 1704 aa16.02■□□□□ 0.15
CRX-202ENST00000539067 PPM1GO15355 546 aaPredicted RBP16.02■□□□□ 0.15
CRX-202ENST00000539067 MEX3CQ5U5Q3 659 aaKnown RBP16.02■□□□□ 0.15
CRX-202ENST00000539067 C8orf37Q96NL8 207 aa16.02■□□□□ 0.15
CRX-202ENST00000539067 USP19O94966 1318 aa16.02■□□□□ 0.15
CRX-202ENST00000539067 EMILIN1Q9Y6C2 1016 aa16.01■□□□□ 0.15
CRX-202ENST00000539067 CRYBG1Q9Y4K1 1723 aa16.01■□□□□ 0.15
CRX-202ENST00000539067 TCP11L2Q8N4U5 519 aa16.01■□□□□ 0.15
CRX-202ENST00000539067 PHRF1Q9P1Y6 1649 aaKnown RBP16.01■□□□□ 0.15
CRX-202ENST00000539067 RCAN3Q9UKA8 241 aa16.01■□□□□ 0.15
CRX-202ENST00000539067 USP31Q70CQ4 1352 aa16■□□□□ 0.15
CRX-202ENST00000539067 KIAA0232Q92628 1395 aa16■□□□□ 0.15
CRX-202ENST00000539067 FAM83GA6ND36 823 aa15.99■□□□□ 0.15
CRX-202ENST00000539067 RRS1Q15050 365 aaKnown RBP15.99■□□□□ 0.15
CRX-202ENST00000539067 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
CRX-202ENST00000539067 PNNQ9H307 717 aaKnown RBP15.99■□□□□ 0.15
CRX-202ENST00000539067 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
CRX-202ENST00000539067 SLFN5Q08AF3 891 aa15.98■□□□□ 0.15
CRX-202ENST00000539067 DUSP27Q5VZP5 1158 aa15.98■□□□□ 0.15
CRX-202ENST00000539067 PRDM11Q9NQV5 511 aa15.98■□□□□ 0.15
CRX-202ENST00000539067 MAPK8IP3Q9UPT6 1336 aa15.97■□□□□ 0.15
CRX-202ENST00000539067 E9PSI1 815 aa15.97■□□□□ 0.15
CRX-202ENST00000539067 NGLY1Q96IV0 654 aa15.97■□□□□ 0.15
CRX-202ENST00000539067 SLIT3O75094 1523 aa15.97■□□□□ 0.15
CRX-202ENST00000539067 CCDC27Q2M243 656 aa15.97■□□□□ 0.15
CRX-202ENST00000539067 WWC1Q8IX03 1113 aa15.97■□□□□ 0.15
CRX-202ENST00000539067 PLEKHF1Q96S99 279 aa15.96■□□□□ 0.15
CRX-202ENST00000539067 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.15
CRX-202ENST00000539067 NEUROD2Q15784 382 aa15.96■□□□□ 0.14
CRX-202ENST00000539067 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.14
CRX-202ENST00000539067 NFAT5O94916 1531 aa15.95■□□□□ 0.14
CRX-202ENST00000539067 RRP1P56182 461 aaKnown RBP15.95■□□□□ 0.14
CRX-202ENST00000539067 TRMT2AQ8IZ69 625 aaKnown RBP15.95■□□□□ 0.14
CRX-202ENST00000539067 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
CRX-202ENST00000539067 FCHSD2O94868 740 aa15.94■□□□□ 0.14
CRX-202ENST00000539067 IL13P35225 146 aa15.94■□□□□ 0.14
CRX-202ENST00000539067 AXIN2Q9Y2T1 843 aa15.94■□□□□ 0.14
CRX-202ENST00000539067 PEAK1Q9H792 1746 aa15.94■□□□□ 0.14
CRX-202ENST00000539067 ARHGEF25Q86VW2 580 aa15.94■□□□□ 0.14
CRX-202ENST00000539067 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
CRX-202ENST00000539067 WDR63Q8IWG1 891 aa15.93■□□□□ 0.14
CRX-202ENST00000539067 BTG4Q9NY30 223 aa15.93■□□□□ 0.14
CRX-202ENST00000539067 AFF2P51816 1311 aa15.93■□□□□ 0.14
CRX-202ENST00000539067 FANCIQ9NVI1 1328 aa15.93■□□□□ 0.14
CRX-202ENST00000539067 NEFMP07197 916 aa15.93■□□□□ 0.14
CRX-202ENST00000539067 RSPH6AQ9H0K4 717 aa15.92■□□□□ 0.14
CRX-202ENST00000539067 SPINK5Q9NQ38 1064 aaPredicted RBP15.92■□□□□ 0.14
CRX-202ENST00000539067 TMPOP42166 694 aaKnown RBP15.92■□□□□ 0.14
CRX-202ENST00000539067 STRN4Q9NRL3 753 aa15.92■□□□□ 0.14
CRX-202ENST00000539067 PPP4R2Q9NY27 417 aa15.92■□□□□ 0.14
CRX-202ENST00000539067 LTN1O94822 1766 aa15.91■□□□□ 0.14
CRX-202ENST00000539067 PRKAR2BP31323 418 aa15.91■□□□□ 0.14
CRX-202ENST00000539067 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
CRX-202ENST00000539067 CPDO75976 1380 aa15.9■□□□□ 0.14
CRX-202ENST00000539067 AMPHP49418 695 aa15.9■□□□□ 0.14
CRX-202ENST00000539067 RGS17Q9UGC6 210 aaPredicted RBP15.9■□□□□ 0.14
CRX-202ENST00000539067 USP21Q9UK80 565 aa15.9■□□□□ 0.14
CRX-202ENST00000539067 RGPD5Q99666 1765 aa15.9■□□□□ 0.14
CRX-202ENST00000539067 FLT4P35916 1363 aa15.9■□□□□ 0.14
CRX-202ENST00000539067 CAMTA1Q9Y6Y1 1673 aa15.89■□□□□ 0.13
CRX-202ENST00000539067 PLCH1Q4KWH8 1693 aa15.89■□□□□ 0.13
CRX-202ENST00000539067 HMOX1P09601 288 aa15.88■□□□□ 0.13
CRX-202ENST00000539067 EIF4A2Q14240 407 aaKnown RBP15.88■□□□□ 0.13
CRX-202ENST00000539067 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
CRX-202ENST00000539067 RGPD1P0DJD0 1748 aa15.88■□□□□ 0.13
CRX-202ENST00000539067 HOXC9P31274 260 aa15.88■□□□□ 0.13
CRX-202ENST00000539067 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
CRX-202ENST00000539067 KIF24Q5T7B8 1368 aa15.88■□□□□ 0.13
CRX-202ENST00000539067 BCL9LQ86UU0 1499 aa15.88■□□□□ 0.13
CRX-202ENST00000539067 COL18A1P39060 1754 aa15.87■□□□□ 0.13
CRX-202ENST00000539067 COL14A1Q05707 1796 aaKnown RBP15.87■□□□□ 0.13
CRX-202ENST00000539067 RIPK4P57078 832 aa15.87■□□□□ 0.13
CRX-202ENST00000539067 EVA1CP58658 441 aa15.87■□□□□ 0.13
CRX-202ENST00000539067 B4GALNT3Q6L9W6 998 aa15.87■□□□□ 0.13
CRX-202ENST00000539067 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
CRX-202ENST00000539067 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
CRX-202ENST00000539067 SLIT2O94813 1529 aa15.87■□□□□ 0.13
CRX-202ENST00000539067 LARP1Q6PKG0 1096 aaKnown RBP15.86■□□□□ 0.13
CRX-202ENST00000539067 TRIM35Q9UPQ4 493 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms