RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 HAX1O00165 279 aa13.81□□□□□ -0.2
NPIPB3-209ENST00000538439 ZMYND10O75800 440 aa13.81□□□□□ -0.2
NPIPB3-209ENST00000538439 TMC1Q8TDI8 760 aa13.81□□□□□ -0.2
NPIPB3-209ENST00000538439 SLC24A3Q9HC58 644 aa13.81□□□□□ -0.2
NPIPB3-209ENST00000538439 DPY19L2Q6NUT2 758 aa13.8□□□□□ -0.2
NPIPB3-209ENST00000538439 ERICH6Q7L0X2 663 aa13.8□□□□□ -0.2
NPIPB3-209ENST00000538439 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
NPIPB3-209ENST00000538439 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
NPIPB3-209ENST00000538439 SPDYE16A6NNV3 312 aaPredicted RBP13.79□□□□□ -0.2
NPIPB3-209ENST00000538439 DSG2Q14126 1118 aa13.79□□□□□ -0.2
NPIPB3-209ENST00000538439 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
NPIPB3-209ENST00000538439 PANK3Q9H999 370 aa13.79□□□□□ -0.2
NPIPB3-209ENST00000538439 NINLQ9Y2I6 1382 aa13.79□□□□□ -0.2
NPIPB3-209ENST00000538439 ANP32CO43423 234 aa13.78□□□□□ -0.2
NPIPB3-209ENST00000538439 IER5LQ5T953 404 aa13.78□□□□□ -0.2
NPIPB3-209ENST00000538439 ADGRB2O60241 1585 aa13.78□□□□□ -0.2
NPIPB3-209ENST00000538439 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.78□□□□□ -0.2
NPIPB3-209ENST00000538439 G3V3G9 751 aa13.77□□□□□ -0.21
NPIPB3-209ENST00000538439 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
NPIPB3-209ENST00000538439 FOXK1P85037 733 aa13.77□□□□□ -0.21
NPIPB3-209ENST00000538439 SLC12A5Q9H2X9 1139 aa13.77□□□□□ -0.21
NPIPB3-209ENST00000538439 NCOA3Q9Y6Q9 1424 aa13.76□□□□□ -0.21
NPIPB3-209ENST00000538439 DPYSL4O14531 572 aa13.76□□□□□ -0.21
NPIPB3-209ENST00000538439 NEUROD2Q15784 382 aa13.76□□□□□ -0.21
NPIPB3-209ENST00000538439 NUDT16Q96DE0 195 aaKnown RBP13.76□□□□□ -0.21
NPIPB3-209ENST00000538439 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
NPIPB3-209ENST00000538439 OCEL1Q9H607 264 aa13.76□□□□□ -0.21
NPIPB3-209ENST00000538439 ADGRL3Q9HAR2 1447 aa13.75□□□□□ -0.21
NPIPB3-209ENST00000538439 MLLT3P42568 568 aaPredicted RBP13.75□□□□□ -0.21
NPIPB3-209ENST00000538439 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
NPIPB3-209ENST00000538439 PDIA6Q15084 440 aa13.75□□□□□ -0.21
NPIPB3-209ENST00000538439 HDGFL2Q7Z4V5 671 aaPredicted RBP13.75□□□□□ -0.21
NPIPB3-209ENST00000538439 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
NPIPB3-209ENST00000538439 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
NPIPB3-209ENST00000538439 KNSTRNQ9Y448 316 aa13.75□□□□□ -0.21
NPIPB3-209ENST00000538439 BARGINQ6ZT62 677 aa13.74□□□□□ -0.21
NPIPB3-209ENST00000538439 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
NPIPB3-209ENST00000538439 C19orf44Q9H6X5 657 aa13.74□□□□□ -0.21
NPIPB3-209ENST00000538439 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
NPIPB3-209ENST00000538439 BOLA1Q9Y3E2 137 aa13.74□□□□□ -0.21
NPIPB3-209ENST00000538439 TMEM94Q12767 1356 aa13.73□□□□□ -0.21
NPIPB3-209ENST00000538439 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
NPIPB3-209ENST00000538439 ATMINO43313 823 aaPredicted RBP13.73□□□□□ -0.21
NPIPB3-209ENST00000538439 ASTLQ6HA08 431 aaPredicted RBP13.73□□□□□ -0.21
NPIPB3-209ENST00000538439 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
NPIPB3-209ENST00000538439 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
NPIPB3-209ENST00000538439 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
NPIPB3-209ENST00000538439 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
NPIPB3-209ENST00000538439 TMEM121BQ9BXQ6 578 aaPredicted RBP13.72□□□□□ -0.21
NPIPB3-209ENST00000538439 MYOM1P52179 1685 aa13.72□□□□□ -0.21
NPIPB3-209ENST00000538439 PPIP5K1Q6PFW1 1433 aa13.72□□□□□ -0.21
NPIPB3-209ENST00000538439 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.21
NPIPB3-209ENST00000538439 PRR36Q9H6K5 1346 aa13.71□□□□□ -0.21
NPIPB3-209ENST00000538439 ATF3P18847 181 aa13.71□□□□□ -0.21
NPIPB3-209ENST00000538439 ATP7BP35670 1465 aa13.7□□□□□ -0.22
NPIPB3-209ENST00000538439 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
NPIPB3-209ENST00000538439 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
NPIPB3-209ENST00000538439 MSH6P52701 1360 aa13.7□□□□□ -0.22
NPIPB3-209ENST00000538439 PLCG2P16885 1265 aa13.69□□□□□ -0.22
NPIPB3-209ENST00000538439 PLPP6Q8IY26 295 aa13.69□□□□□ -0.22
NPIPB3-209ENST00000538439 CARD14Q9BXL6 1004 aa13.69□□□□□ -0.22
NPIPB3-209ENST00000538439 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
NPIPB3-209ENST00000538439 DCCP43146 1447 aa13.68□□□□□ -0.22
NPIPB3-209ENST00000538439 CNGB1Q14028 1251 aaPredicted RBP13.68□□□□□ -0.22
NPIPB3-209ENST00000538439 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
NPIPB3-209ENST00000538439 A0A1W2PP64 1363 aa13.68□□□□□ -0.22
NPIPB3-209ENST00000538439 FMN2Q9NZ56 1722 aa13.67□□□□□ -0.22
NPIPB3-209ENST00000538439 CGNL1Q0VF96 1302 aa13.67□□□□□ -0.22
NPIPB3-209ENST00000538439 NSD3Q9BZ95 1437 aa13.67□□□□□ -0.22
NPIPB3-209ENST00000538439 C2orf72A6NCS6 295 aa13.67□□□□□ -0.22
NPIPB3-209ENST00000538439 EVX2Q03828 476 aa13.67□□□□□ -0.22
NPIPB3-209ENST00000538439 RALBP1Q15311 655 aa13.67□□□□□ -0.22
NPIPB3-209ENST00000538439 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
NPIPB3-209ENST00000538439 PRKRIP1Q9H875 184 aaPredicted RBP13.67□□□□□ -0.22
NPIPB3-209ENST00000538439 NPC1L1Q9UHC9 1359 aa13.67□□□□□ -0.22
NPIPB3-209ENST00000538439 KIF3CO14782 793 aa13.66□□□□□ -0.22
NPIPB3-209ENST00000538439 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
NPIPB3-209ENST00000538439 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
NPIPB3-209ENST00000538439 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
NPIPB3-209ENST00000538439 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
NPIPB3-209ENST00000538439 ACEP12821 1306 aa13.65□□□□□ -0.22
NPIPB3-209ENST00000538439 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
NPIPB3-209ENST00000538439 ESCO1Q5FWF5 840 aa13.65□□□□□ -0.22
NPIPB3-209ENST00000538439 AK7Q96M32 723 aa13.65□□□□□ -0.22
NPIPB3-209ENST00000538439 CD163L1Q9NR16 1453 aa13.65□□□□□ -0.22
NPIPB3-209ENST00000538439 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
NPIPB3-209ENST00000538439 LRP6O75581 1613 aa13.64□□□□□ -0.23
NPIPB3-209ENST00000538439 USP32Q8NFA0 1604 aa13.64□□□□□ -0.23
NPIPB3-209ENST00000538439 TOPAZ1Q8N9V7 1692 aa13.63□□□□□ -0.23
NPIPB3-209ENST00000538439 CCER2I3L3R5 266 aa13.63□□□□□ -0.23
NPIPB3-209ENST00000538439 KRI1Q8N9T8 703 aaKnown RBP13.63□□□□□ -0.23
NPIPB3-209ENST00000538439 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
NPIPB3-209ENST00000538439 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
NPIPB3-209ENST00000538439 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
NPIPB3-209ENST00000538439 NSD2O96028 1365 aa13.62□□□□□ -0.23
NPIPB3-209ENST00000538439 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
NPIPB3-209ENST00000538439 MORC1Q86VD1 984 aa13.61□□□□□ -0.23
NPIPB3-209ENST00000538439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.61□□□□□ -0.23
NPIPB3-209ENST00000538439 ORAI2Q96SN7 254 aa13.61□□□□□ -0.23
NPIPB3-209ENST00000538439 MST1RQ04912 1400 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms