RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 RTF1Q92541 710 aaKnown RBP10.97□□□□□ -0.65
UBE3B-208ENST00000538070 RICTORQ6R327 1708 aa10.97□□□□□ -0.65
UBE3B-208ENST00000538070 ZC3H13Q5T200 1668 aaKnown RBP10.96□□□□□ -0.65
UBE3B-208ENST00000538070 USHBP1Q8N6Y0 703 aa10.96□□□□□ -0.65
UBE3B-208ENST00000538070 ROBO2Q9HCK4 1378 aa10.96□□□□□ -0.65
UBE3B-208ENST00000538070 CD163L1Q9NR16 1453 aa10.96□□□□□ -0.66
UBE3B-208ENST00000538070 PREX1Q8TCU6 1659 aa10.96□□□□□ -0.66
UBE3B-208ENST00000538070 TTC21BQ7Z4L5 1316 aa10.96□□□□□ -0.66
UBE3B-208ENST00000538070 CLTCQ00610 1675 aaKnown RBP10.95□□□□□ -0.66
UBE3B-208ENST00000538070 CALD1Q05682 793 aaKnown RBP10.95□□□□□ -0.66
UBE3B-208ENST00000538070 ZFYVE9O95405 1425 aa10.95□□□□□ -0.66
UBE3B-208ENST00000538070 TMEM131LA2VDJ0 1609 aa10.95□□□□□ -0.66
UBE3B-208ENST00000538070 HSP90AA1P07900 732 aaKnown RBP10.95□□□□□ -0.66
UBE3B-208ENST00000538070 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-208ENST00000538070 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-208ENST00000538070 MYO3AQ8NEV4 1616 aa10.95□□□□□ -0.66
UBE3B-208ENST00000538070 NEURL4Q96JN8 1562 aa10.94□□□□□ -0.66
UBE3B-208ENST00000538070 IQSEC2Q5JU85 1478 aa10.94□□□□□ -0.66
UBE3B-208ENST00000538070 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
UBE3B-208ENST00000538070 ARHGEF40Q8TER5 1519 aa10.94□□□□□ -0.66
UBE3B-208ENST00000538070 C22orf23Q9BZE7 217 aa10.94□□□□□ -0.66
UBE3B-208ENST00000538070 ZBTB40Q9NUA8 1239 aa10.94□□□□□ -0.66
UBE3B-208ENST00000538070 SHPRHQ149N8 1683 aa10.94□□□□□ -0.66
UBE3B-208ENST00000538070 F6X3S4 739 aa10.94□□□□□ -0.66
UBE3B-208ENST00000538070 LMOD3Q0VAK6 560 aa10.93□□□□□ -0.66
UBE3B-208ENST00000538070 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
UBE3B-208ENST00000538070 ABTB2Q8N961 1025 aa10.93□□□□□ -0.66
UBE3B-208ENST00000538070 TSPYL4Q9UJ04 414 aa10.93□□□□□ -0.66
UBE3B-208ENST00000538070 SLC4A2P04920 1241 aa10.93□□□□□ -0.66
UBE3B-208ENST00000538070 CT47B1P0C2W7 299 aaPredicted RBP10.93□□□□□ -0.66
UBE3B-208ENST00000538070 USP19O94966 1318 aa10.92□□□□□ -0.66
UBE3B-208ENST00000538070 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
UBE3B-208ENST00000538070 SMARCA5O60264 1052 aaPredicted RBP10.92□□□□□ -0.66
UBE3B-208ENST00000538070 CHD1LQ86WJ1 897 aa10.92□□□□□ -0.66
UBE3B-208ENST00000538070 IFT57Q9NWB7 429 aa10.92□□□□□ -0.66
UBE3B-208ENST00000538070 TMEM2Q9UHN6 1383 aa10.92□□□□□ -0.66
UBE3B-208ENST00000538070 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
UBE3B-208ENST00000538070 IL16Q14005 1332 aa10.91□□□□□ -0.66
UBE3B-208ENST00000538070 KCNA6P17658 529 aa10.91□□□□□ -0.66
UBE3B-208ENST00000538070 C16orf71Q8IYS4 520 aaPredicted RBP10.91□□□□□ -0.66
UBE3B-208ENST00000538070 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
UBE3B-208ENST00000538070 DIP2BQ9P265 1576 aa10.91□□□□□ -0.66
UBE3B-208ENST00000538070 EDC4Q6P2E9 1401 aaKnown RBP10.91□□□□□ -0.66
UBE3B-208ENST00000538070 ALDH1L2Q3SY69 923 aa10.9□□□□□ -0.66
UBE3B-208ENST00000538070 MAP3K19Q56UN5 1328 aa10.9□□□□□ -0.66
UBE3B-208ENST00000538070 EIF2S2P20042 333 aaKnown RBP10.9□□□□□ -0.66
UBE3B-208ENST00000538070 CPS1P31327 1500 aa10.89□□□□□ -0.67
UBE3B-208ENST00000538070 ZBTB7BO15156 539 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-208ENST00000538070 MTHFSDQ2M296 383 aaKnown RBP10.89□□□□□ -0.67
UBE3B-208ENST00000538070 GSE1Q14687 1217 aa10.89□□□□□ -0.67
UBE3B-208ENST00000538070 ESCO1Q5FWF5 840 aa10.89□□□□□ -0.67
UBE3B-208ENST00000538070 THEMISQ8N1K5 641 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-208ENST00000538070 TBC1D32Q96NH3 1257 aa10.89□□□□□ -0.67
UBE3B-208ENST00000538070 API5Q9BZZ5 524 aaKnown RBP10.89□□□□□ -0.67
UBE3B-208ENST00000538070 BRPF3Q9ULD4 1205 aa10.89□□□□□ -0.67
UBE3B-208ENST00000538070 NLRP1Q9C000 1473 aa10.89□□□□□ -0.67
UBE3B-208ENST00000538070 LRRC7Q96NW7 1537 aa10.89□□□□□ -0.67
UBE3B-208ENST00000538070 HDAC1Q13547 482 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-208ENST00000538070 G2E3Q7L622 706 aa10.88□□□□□ -0.67
UBE3B-208ENST00000538070 HSCBQ8IWL3 235 aa10.88□□□□□ -0.67
UBE3B-208ENST00000538070 PNPLA6Q8IY17 1366 aa10.88□□□□□ -0.67
UBE3B-208ENST00000538070 HSP90AB1P08238 724 aaKnown RBP10.88□□□□□ -0.67
UBE3B-208ENST00000538070 AAMPQ13685 434 aa10.88□□□□□ -0.67
UBE3B-208ENST00000538070 TSHZ3Q63HK5 1081 aa10.88□□□□□ -0.67
UBE3B-208ENST00000538070 EYA1Q99502 592 aa10.88□□□□□ -0.67
UBE3B-208ENST00000538070 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-208ENST00000538070 FKBP5Q13451 457 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-208ENST00000538070 SMC5Q8IY18 1101 aa10.87□□□□□ -0.67
UBE3B-208ENST00000538070 OTUD7AQ8TE49 926 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-208ENST00000538070 MEIS3Q99687 375 aa10.87□□□□□ -0.67
UBE3B-208ENST00000538070 USP35Q9P2H5 1018 aa10.87□□□□□ -0.67
UBE3B-208ENST00000538070 FAM135BQ49AJ0 1406 aa10.87□□□□□ -0.67
UBE3B-208ENST00000538070 NUCB1Q02818 461 aa10.87□□□□□ -0.67
UBE3B-208ENST00000538070 PSME1Q06323 249 aa10.87□□□□□ -0.67
UBE3B-208ENST00000538070 RBM42Q9BTD8 480 aaKnown RBP10.87□□□□□ -0.67
UBE3B-208ENST00000538070 SIRT2Q8IXJ6 389 aa10.86□□□□□ -0.67
UBE3B-208ENST00000538070 STK31Q9BXU1 1019 aa10.86□□□□□ -0.67
UBE3B-208ENST00000538070 ANXA1P04083 346 aa10.85□□□□□ -0.67
UBE3B-208ENST00000538070 MAP2P11137 1827 aaKnown RBP10.85□□□□□ -0.67
UBE3B-208ENST00000538070 NOL8Q76FK4 1167 aaKnown RBP10.85□□□□□ -0.67
UBE3B-208ENST00000538070 EXOC6BQ9Y2D4 811 aa10.85□□□□□ -0.67
UBE3B-208ENST00000538070 ATP7BP35670 1465 aa10.84□□□□□ -0.67
UBE3B-208ENST00000538070 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
UBE3B-208ENST00000538070 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
UBE3B-208ENST00000538070 CHMP4BQ9H444 224 aaKnown RBP10.84□□□□□ -0.67
UBE3B-208ENST00000538070 ZNF853P0CG23 659 aa10.84□□□□□ -0.67
UBE3B-208ENST00000538070 LRRC59Q96AG4 307 aaKnown RBP10.83□□□□□ -0.68
UBE3B-208ENST00000538070 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
UBE3B-208ENST00000538070 TBC1D9Q6ZT07 1266 aa10.83□□□□□ -0.68
UBE3B-208ENST00000538070 GCC1Q96CN9 775 aa10.82□□□□□ -0.68
UBE3B-208ENST00000538070 SETD1BQ9UPS6 1966 aaKnown RBP10.82□□□□□ -0.68
UBE3B-208ENST00000538070 FOXD4L5Q5VV16 416 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-208ENST00000538070 FOXD4L4Q8WXT5 416 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-208ENST00000538070 CHL1O00533 1208 aa10.82□□□□□ -0.68
UBE3B-208ENST00000538070 ADAMTS13Q76LX8 1427 aa10.81□□□□□ -0.68
UBE3B-208ENST00000538070 TRIM6-TRIM34B2RNG4 842 aa10.81□□□□□ -0.68
UBE3B-208ENST00000538070 RILPL2Q969X0 211 aa10.81□□□□□ -0.68
UBE3B-208ENST00000538070 PTPRUQ92729 1446 aa10.81□□□□□ -0.68
UBE3B-208ENST00000538070 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
UBE3B-208ENST00000538070 USP32Q8NFA0 1604 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms