RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
SEMA4D-221ENST00000537934 PDIA4P13667 645 aaKnown RBP14.18□□□□□ -0.14
SEMA4D-221ENST00000537934 HSCBQ8IWL3 235 aa14.18□□□□□ -0.14
SEMA4D-221ENST00000537934 WDR43Q15061 677 aaKnown RBP eCLIP14.18□□□□□ -0.14
SEMA4D-221ENST00000537934 TNPO1Q92973 898 aaKnown RBP14.18□□□□□ -0.14
SEMA4D-221ENST00000537934 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
SEMA4D-221ENST00000537934 BBXQ8WY36 941 aaPredicted RBP14.17□□□□□ -0.14
SEMA4D-221ENST00000537934 CCDC94Q9BW85 323 aaPredicted RBP14.17□□□□□ -0.14
SEMA4D-221ENST00000537934 NOL7Q9UMY1 257 aaKnown RBP14.17□□□□□ -0.14
SEMA4D-221ENST00000537934 ATAD2Q6PL18 1390 aa14.17□□□□□ -0.14
SEMA4D-221ENST00000537934 SIRT1Q96EB6 747 aa14.17□□□□□ -0.14
SEMA4D-221ENST00000537934 IBTKQ9P2D0 1353 aaPredicted RBP14.17□□□□□ -0.14
SEMA4D-221ENST00000537934 WASLO00401 505 aaPredicted RBP14.16□□□□□ -0.14
SEMA4D-221ENST00000537934 ZSCAN20P17040 1043 aaPredicted RBP14.16□□□□□ -0.14
SEMA4D-221ENST00000537934 PRDM10Q9NQV6 1147 aa14.16□□□□□ -0.14
SEMA4D-221ENST00000537934 DIP2AQ14689 1571 aa14.16□□□□□ -0.14
SEMA4D-221ENST00000537934 A0A1W2PP64 1363 aa14.16□□□□□ -0.14
SEMA4D-221ENST00000537934 ANKRD36BQ8N2N9 1353 aa14.16□□□□□ -0.14
SEMA4D-221ENST00000537934 CSPP1Q1MSJ5 1256 aa14.16□□□□□ -0.14
SEMA4D-221ENST00000537934 CABP1Q9NZU7 370 aa14.16□□□□□ -0.14
SEMA4D-221ENST00000537934 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
SEMA4D-221ENST00000537934 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.14
SEMA4D-221ENST00000537934 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
SEMA4D-221ENST00000537934 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 KCNA6P17658 529 aa14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 RAB3GAP1Q15042 981 aa14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 NPC1L1Q9UHC9 1359 aa14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 CD163L1Q9NR16 1453 aa14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 GTF2E1P29083 439 aaPredicted RBP14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 TNNT2P45379 298 aaPredicted RBP14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 SMC5Q8IY18 1101 aa14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 COG6Q9Y2V7 657 aa14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 E9PSI1 815 aa14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 PPP2R1AP30153 589 aa14.14□□□□□ -0.15
SEMA4D-221ENST00000537934 NUTM2FA1L443 756 aa14.13□□□□□ -0.15
SEMA4D-221ENST00000537934 GTPBP4Q9BZE4 634 aaKnown RBP14.13□□□□□ -0.15
SEMA4D-221ENST00000537934 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
SEMA4D-221ENST00000537934 XRN1Q8IZH2 1706 aaKnown RBP14.13□□□□□ -0.15
SEMA4D-221ENST00000537934 KIF20AO95235 890 aa14.13□□□□□ -0.15
SEMA4D-221ENST00000537934 SASS6Q6UVJ0 657 aa14.13□□□□□ -0.15
SEMA4D-221ENST00000537934 SNX21Q969T3 373 aa14.13□□□□□ -0.15
SEMA4D-221ENST00000537934 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.13□□□□□ -0.15
SEMA4D-221ENST00000537934 PANK1Q8TE04 598 aa14.12□□□□□ -0.15
SEMA4D-221ENST00000537934 PTCH1Q13635 1447 aa14.12□□□□□ -0.15
SEMA4D-221ENST00000537934 CANXP27824 592 aaKnown RBP14.12□□□□□ -0.15
SEMA4D-221ENST00000537934 MCM5P33992 734 aa14.12□□□□□ -0.15
SEMA4D-221ENST00000537934 XPCQ01831 940 aaPredicted RBP14.12□□□□□ -0.15
SEMA4D-221ENST00000537934 NPHP4O75161 1426 aaPredicted RBP14.11□□□□□ -0.15
SEMA4D-221ENST00000537934 MFAP1P55081 439 aaKnown RBP14.11□□□□□ -0.15
SEMA4D-221ENST00000537934 NUDT16Q96DE0 195 aaKnown RBP14.11□□□□□ -0.15
SEMA4D-221ENST00000537934 PRR36Q9H6K5 1346 aa14.11□□□□□ -0.15
SEMA4D-221ENST00000537934 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
SEMA4D-221ENST00000537934 RBM33Q96EV2 1170 aaKnown RBP14.11□□□□□ -0.15
SEMA4D-221ENST00000537934 ARID3AQ99856 593 aa14.11□□□□□ -0.15
SEMA4D-221ENST00000537934 TERF2IPQ9NYB0 399 aa14.11□□□□□ -0.15
SEMA4D-221ENST00000537934 PDLIM2Q96JY6 352 aa14.1□□□□□ -0.15
SEMA4D-221ENST00000537934 PPIP5K1Q6PFW1 1433 aa14.1□□□□□ -0.15
SEMA4D-221ENST00000537934 HSPA2P54652 639 aa14.1□□□□□ -0.15
SEMA4D-221ENST00000537934 PCDHB15Q9Y5E8 787 aa14.1□□□□□ -0.15
SEMA4D-221ENST00000537934 PIK3R4Q99570 1358 aa14.1□□□□□ -0.15
SEMA4D-221ENST00000537934 ATP7BP35670 1465 aa14.1□□□□□ -0.15
SEMA4D-221ENST00000537934 ADGRB2O60241 1585 aa14.09□□□□□ -0.15
SEMA4D-221ENST00000537934 USP32Q8NFA0 1604 aa14.09□□□□□ -0.15
SEMA4D-221ENST00000537934 KLHL40Q2TBA0 621 aa14.09□□□□□ -0.15
SEMA4D-221ENST00000537934 RWDD1Q9H446 243 aaPredicted RBP14.09□□□□□ -0.15
SEMA4D-221ENST00000537934 ZKSCAN5Q9Y2L8 839 aa14.09□□□□□ -0.15
SEMA4D-221ENST00000537934 LETM1O95202 739 aaPredicted RBP14.08□□□□□ -0.15
SEMA4D-221ENST00000537934 ZNF445P59923 1031 aa14.08□□□□□ -0.15
SEMA4D-221ENST00000537934 HDGFL2Q7Z4V5 671 aaPredicted RBP14.08□□□□□ -0.15
SEMA4D-221ENST00000537934 MORC1Q86VD1 984 aa14.08□□□□□ -0.15
SEMA4D-221ENST00000537934 CHD2O14647 1828 aaKnown RBP14.08□□□□□ -0.16
SEMA4D-221ENST00000537934 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
SEMA4D-221ENST00000537934 GOLGA6L22H0YM25 854 aa14.07□□□□□ -0.16
SEMA4D-221ENST00000537934 CLEC17AQ6ZS10 378 aa14.07□□□□□ -0.16
SEMA4D-221ENST00000537934 GGNBP2Q9H3C7 697 aa14.07□□□□□ -0.16
SEMA4D-221ENST00000537934 NAP1L2Q9ULW6 460 aaPredicted RBP14.07□□□□□ -0.16
SEMA4D-221ENST00000537934 RBM25P49756 843 aaKnown RBP14.06□□□□□ -0.16
SEMA4D-221ENST00000537934 NGEFQ8N5V2 710 aa14.06□□□□□ -0.16
SEMA4D-221ENST00000537934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
SEMA4D-221ENST00000537934 FYB1O15117 783 aa14.06□□□□□ -0.16
SEMA4D-221ENST00000537934 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
SEMA4D-221ENST00000537934 DDX49Q9Y6V7 483 aaKnown RBP14.05□□□□□ -0.16
SEMA4D-221ENST00000537934 APAF1O14727 1248 aa14.05□□□□□ -0.16
SEMA4D-221ENST00000537934 CPSF1Q10570 1443 aaKnown RBP14.05□□□□□ -0.16
SEMA4D-221ENST00000537934 CDC42BPGQ6DT37 1551 aa14.04□□□□□ -0.16
SEMA4D-221ENST00000537934 CCDC146Q8IYE0 955 aa14.04□□□□□ -0.16
SEMA4D-221ENST00000537934 CHMP4BQ9H444 224 aaKnown RBP14.04□□□□□ -0.16
SEMA4D-221ENST00000537934 NSD2O96028 1365 aa14.03□□□□□ -0.16
SEMA4D-221ENST00000537934 MYRIPQ8NFW9 859 aa14.03□□□□□ -0.16
SEMA4D-221ENST00000537934 TMEM51Q9NW97 253 aa14.03□□□□□ -0.16
SEMA4D-221ENST00000537934 TOPAZ1Q8N9V7 1692 aa14.03□□□□□ -0.16
SEMA4D-221ENST00000537934 RGPD8O14715 1765 aaPredicted RBP14.03□□□□□ -0.16
SEMA4D-221ENST00000537934 IPO4Q8TEX9 1081 aaKnown RBP14.02□□□□□ -0.16
SEMA4D-221ENST00000537934 CCDC39Q9UFE4 941 aa14.02□□□□□ -0.16
SEMA4D-221ENST00000537934 NALCNQ8IZF0 1738 aa14.02□□□□□ -0.17
SEMA4D-221ENST00000537934 TAF3Q5VWG9 929 aa14.02□□□□□ -0.17
SEMA4D-221ENST00000537934 LMTK3Q96Q04 1460 aa14.01□□□□□ -0.17
SEMA4D-221ENST00000537934 RBSNQ9H1K0 784 aa14.01□□□□□ -0.17
SEMA4D-221ENST00000537934 ACEP12821 1306 aa14.01□□□□□ -0.17
SEMA4D-221ENST00000537934 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms